Osmerus eperlanus (European smelt): 134012009
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Entry
134012009 CDS
T10927
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1-like isoform X1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134012009
Enzymes [BR:
oep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134012009
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134012009
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Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
zf-C2H2
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
134012009
NCBI-ProteinID:
XP_062307588
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Position
25:10024412..10033355
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AA seq
483 aa
AA seq
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MAPLPPGHHSVPLLDSPTWFCDIRTSPSSCVQDEGFPLLHPEVLLLPVSPVLDPPPPSAL
LLSVPAVGLAGATDAPSPHVQGVWCPCVSCDACLKGNFRGRRYKCLICYDYDLCASCYEG
GATTTRHTTEHPMQCILTRVDFDLYYGGEALSVEQPQAYTCPYCGRMGHTESSLQEHVAG
EHADTSTEVICPICAALPGGDPNHVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGR
GLGGQRARRSNMHFTSTTTGGLSNTQNSSQSSNYNREAMDPIAELLSQLSGVRRSAGGQV
SSGPSASQLQQLQMQLQLERQQAQAARQQLDTARGAPRSAPARAALGTANSNASPNANPC
PPPGPHPGTHEHNTHAGHNFLLNRLSEPRLSEVDLQECESGWADRGLFVTELLLSTLLLD
HNAPAAHHHAGPLRGFADFGAMGCLDVMTLEVALENLNLREATANAVKKQPPPRPHADAP
PPR
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcccctctacctccaggacatcattcagtcccgctcctcgactcgcccacttggttc
tgtgacataaggacgtctccttcttcttgcgttcaggatgaaggattccccctcctacac
cctgaggtgcttctccttcctgtctccccagtcctggaccctcctcctccctcggccctg
ctcctctcagtccctgccgtcggtctggcgggggctacggatgccccgtccccacacgtc
cagggcgtttggtgcccatgtgtaagctgcgacgcgtgtttgaaaggcaacttccgaggg
cggagatacaagtgtttaatctgctacgactacgacctgtgtgcgtcgtgttacgagggc
ggagccaccaccaccagacacaccacagaacaccccatgcagtgcatactgaccagggtc
gacttcgacctgtactatggaggggaggccctgtctgtggagcagccccaggcctacacc
tgcccgtactgtggcaggatgggccacacagagagctccctgcaggagcacgtagcaggg
gagcatgcagacacctcgaccgaggtgatatgccccatctgtgcagcgctgcctggcgga
gaccccaaccatgtgacagacgactttgctgctcatctcacactggaacacagagctccc
agagacctggatgagtccagcggggtgcgtcatgtgaggaggatgttccaccctgggagg
gggctgggggggcagcgggctcgtaggtccaacatgcacttcaccagcaccaccaccggg
gggctctccaacacccagaactcctcgcagagctccaactacaacagagaggccatggac
cccatagcagagctcctgtcccagctgtcgggggtgcggcgctccgcggggggccaggtg
agctcggggccgtcggcctcgcagctgcagcagctccagatgcagctgcagcttgagcgt
cagcaggcccaggctgcccggcagcagctggacacggcccgcggagccccccgcagcgcc
cccgcccgcgccgccctgggcaccgccaacagcaacgccagccccaacgccaacccctgc
cccccgcccggcccccaccccggcacgcacgagcacaacacacacgccgggcacaacttc
ctcctcaacaggctgagtgagcccaggctgtcggaggtggacctgcaggagtgtgagtct
ggctgggcggaccgcggcctgtttgtgacagagctgctgctgtccacactgctgctggac
cacaacgccccagcagcccatcaccacgccggccctcttcggggcttcgccgacttcggg
gccatgggctgcctggatgtcatgaccctggaggtggcgctggagaacctcaacctcaga
gaagcaacggcgaacgccgtgaagaagcagccccccccccgcccccacgctgatgccccg
cccccacgctga
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