Osmerus eperlanus (European smelt): 134012058
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Entry
134012058 CDS
T10927
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134012058 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
oep03029
]
134012058 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
oep04031
]
134012058 (rhot1a)
Mitochondrial biogenesis [BR:
oep03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
134012058 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
134012058 (rhot1a)
GTP-binding proteins [BR:
oep04031
]
Small (monomeric) G-proteins
Rho Family
Miro
134012058 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
EF-hand_7
Arf
EF-hand_1
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_22
Pox_A32
AAA
EF-hand_8
ORC-CDC6-like
AAA_5
AAA_25
Motif
Other DBs
NCBI-GeneID:
134012058
NCBI-ProteinID:
XP_062307672
LinkDB
All DBs
Position
2:9052144..9065923
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AA seq
660 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSDIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPSCIKSLTRIFKVSDLDNDGILNDNELNFFQRTCFNTPLAPQALEDVKNVVRKNMTDG
VKDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPLMKIPLDCTTE
LNHNAYLFLQSVFDKHDKDRDCALSPDEVKDLFKIFPYMPWGPDVNNTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRCLEYMGYLGYSIICEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNILGGRGSGKSAFLQAFLGRNLQKQRKIREDHKSLYAISTTYVYGQEKYLLLHEVMPDF
DFLSETDLACDVVCLVYDVNNPRSFEYCAKVYKQYFMDSKTPCMMIAAKSDLHEARQHHT
LTPLEFCRKHKLHPPQPFTCNTAEAPGRDIYTKLTTMAMYPHARLRCMCSCNRCTFCIAQ
NILRSQLLRTVKAKLYRVVLNRHMAQVDLKSSTFWLRASVGATVCAVLGFAMYRALLKQR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggacgtaaggatattactcgtcggggagcctaaagtggggaaaacgtccctg
atcatgtcattggtcagtgaggagttccctgatgaggttccccttcgagccgaggagatc
acaatccctgcagacgtcaccccagagagagtccccacacacatagtggactactcagaa
gcagagcagtctgatgaacagctgtatcaggaaatctctaaggcaaacgttatctgcata
gtgtactctgtcaacaacaagaagtccattgagaaggtgacaagccattggattcccctt
ataaatgacaggacggacaaggatagcagggttcctctgatcctggtggggaacaagtct
gacctggtggagcacagcagtatggagaccattctgcccatcatgaaccagtattccgac
atagagacctgcgtggagtgttctgctaaaaacctgaagaacatttctgagctcttctat
tacgcccagaaggccgtgctccaccctactggacccctgtactgcccagaggagaaggag
atgaagccgtcttgcatcaagtctctcactcgcatcttcaaagtgtcggatcttgacaac
gacggcatcctcaacgacaatgaactcaacttcttccagaggacgtgtttcaacacaccg
ctggcgccccaggccttggaggacgtgaagaacgtggtgaggaagaacatgacggacggc
gtgaaggacaacggcctcacactcaaagggttcctgttcctgcacacgctcttcatccag
aggggccgccacgagaccacctggacggtgctgcggaggttcggctacgacgacgacctg
gagctcacccaggagtacctcttccccctaatgaagatccctctggactgcaccacagag
ctaaaccacaatgcataccttttcctccagagtgtcttcgacaagcatgataaagacaga
gactgtgccttgtctccagacgaggtgaaggacttgtttaagatcttcccctacatgcct
tggggccctgacgtcaacaacaccgtttgtaccaacgagcagggctggattacctaccag
ggatacctctcccagtggacgctaacgacctacctggacgtacagaggtgtttggagtac
atgggctacctgggctactccatcatctgcgaacaggagtctcaggctgcagccatcaca
gtgactcgtaacaagcgcatcgacctgcagaagaagcagacccagcgcagcgtgttccgc
tgcaacatcctgggaggccgtggcagcgggaagagtgccttcctgcaggccttcctgggc
cggaaccttcagaaacagaggaagatccgtgaggaccacaagtcactctacgccatcagc
accacctacgtctacggccaggagaagtacctgctgctccacgaggtcatgccagatttt
gacttcctctccgagacagacctggcatgtgacgttgtctgcttggtgtacgacgtcaac
aacccccgctcgttcgagtactgcgccaaagtctacaagcaatacttcatggacagcaag
acgccgtgcatgatgatcgcggccaagtcggacctgcacgaggcccgccagcatcacacc
ctgacgccgctggagttctgccgcaagcacaagctccacccccctcagcccttcacctgc
aacacggcggaggcgcccggcagagacatatacaccaaactcaccaccatggccatgtac
ccccacgcccgcctccgctgcatgtgctcctgcaaccggtgcaccttctgcatcgctcag
aacatcctcaggtcccagcttctgaggacggtcaaggccaaactctaccgtgtggttctc
aacagacacatggctcaggtggacctgaagagctctacgttctggctgagggcgagcgtg
ggtgccaccgtgtgtgcggtgctgggctttgccatgtacagagctctcctcaaacaacga
tga
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