Osmerus eperlanus (European smelt): 134012110
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Entry
134012110 CDS
T10927
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b
KO
K06788
coxsackievirus and adenovirus receptor
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03267
Virion - Adenovirus
oep04514
Cell adhesion molecule (CAM) interaction
oep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
134012110 (vsig8b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
134012110 (vsig8b)
04517 IgSF CAM signaling
134012110 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134012110 (vsig8b)
Cell adhesion molecules [BR:
oep04515
]
Immunoglobulin superfamily
CTX family
134012110 (vsig8b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
ig
Ig_3
I-set
Ig_2
Ig_C17orf99
DUF4719
Ig_PDGFR_d4
C2-set_3
Tweety
WBP-1
TMEM154
Adeno_E3_CR2
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
134012110
NCBI-ProteinID:
XP_062307746
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All DBs
Position
25:complement(7295402..7300656)
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AA seq
366 aa
AA seq
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MGMLFTQFWLQLAGMFVFTHYLNSGVTEAMQVTSTGPQTIQKAKGESVTLGCTYTPGSSD
TGELDIEWSNVSPDMTQKDTLILSYAGGKTLHYGDASLSSRLSFVADPTKGDASVSISSL
LASDTATYQCKVKKAPGVDMRKVTVVVMVPPSEPKCWVDSSEEKGTTVSLRCKSSEGSTP
LKYVWKRESGGPIPPTATQDPQTGLLMIKNHSESYMGNYLCEVQNAVGKQQCKYTLNAYN
PTDRVGVIVGAVIGALLLLLLLLFLIWLLICCCHKRRYQKELANEIREDAPAPESRPSSR
NSSYRSVLGYRAHSGVIFSSARKAPSSRAGSGQGSIHTDQGRGTPQPAPRQNPPPLKYDS
RYGYPV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgggaatgctttttacacaattctggctacagttggctgggatgtttgtttttacacac
tatttgaattcaggtgtgacagaggccatgcaggtgacatctacgggcccccagactatc
cagaaggccaagggggagtccgtgacgcttgggtgcacgtacacacctggttcctcagac
acgggggagctggacatcgagtggtccaatgtcagcccggacatgacccagaaagacaca
ctgatcttatcttacgcaggagggaagacgttacattacggggatgccagcttgtcctcc
agactgagtttcgtcgcagatcccacgaaaggagacgcctccgtttcgatctcctcgtta
ctggcctcagacacggcgacataccagtgcaaagtaaagaaggcaccgggcgtcgacatg
agaaaagtcaccgtggtggtaatggtccccccctccgagcccaagtgctgggtggacagc
agtgaggagaaggggaccacggtgtccctgcgctgcaagtcctctgagggctccactcct
ctgaaatacgtctggaagagagagagtggagggcccatccctcccactgccacacaagac
ccacagaccgggctgctgatgataaagaaccactcggagagctacatgggaaactacctg
tgcgaggtccagaatgcagtggggaaacaacagtgcaaatacacgctgaatgcatacaat
cccacagacagagtgggggtgattgtgggcgctgtgattggtgctctgctcctgctcctc
ctcctgctgttcctcatctggctgctgatttgctgctgccacaagcgccgctaccagaag
gagctcgccaacgagatcagggaggacgcccccgcccccgagagccggccctccagcagg
aactccagctaccgctcggtgctgggataccgcgcccactccggggtgatcttcagctcc
gccaggaaggccccgtccagcagagcaggctccggccagggcagcatccacacagaccag
ggcagaggcacgccccagcctgccccccggcagaacccccctcccctgaagtatgacagt
cgctatggttaccctgtgtaa
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