Osmerus eperlanus (European smelt): 134012112
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Entry
134012112 CDS
T10927
Symbol
lrp13
Name
(RefSeq) low-density lipoprotein receptor-related protein 4
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
Membrane trafficking [BR:
oep04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
134012112 (lrp13)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134012112
NCBI-ProteinID:
XP_062307747
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Position
25:5571034..5579046
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AA seq
1448 aa
AA seq
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MNTCLLGLVVILHFLGSLRGVNAEVLAPIQCKLGKKLCNDGTECVSYNHVCDGETDCRDG
SDEKDCAVGCNTDQFQCAHGKKCIDRSEVCDGEAQCQDRSDEADCVAHMEGCSHHCDNKT
RCLPVTFLCDGERDCQDGTDEANCDSDDRVPTSTPAPRNCRLGSKFCDDKTECVLYNHVC
DGEADCTDGSDEKGCPSKCGNGEFQCAHGKKCIDHRQLCDGVAQCQDRSDEADCVAHTEG
CSHHCDNKTRCLPVTFLCDGERDCQDGTDEANCADLRCNGGEFRCSSGQCVSIGMQCDGH
PDCKDRSDEESCAELPECPTSHLCPHSKECLIEEWLCDGYKDCKDGTDEKDCKSVMMECG
EFQWSCTSKTQCVPKLWRCDGAKDCEDGSDETGCGIPPCLPHQFQCGSMECLDVALVCNG
MTNCADGSDEGGDCQTKCPLPATAHCAQDCHSTPQGMRCWCQSGYKLQEDGMSCVDTDEC
KDRHPGVCSQLCTNTEGSYKCRCSTGYILEADGRSCKITGEPFLLASVKTELFLFGLLGS
SLDVLLSSAKKAILSVDYDWKEQKVFWVSLDSESIRWSSLDQKSKGTLINGVKSDCIAVD
WIGRNLYWIDGVGNQIIAIRLTTAVTNALDYSVILDEDFEQPRSLALLPQKGIMFWSEIG
NDPKIERAGMDGSERRVVVDRNLSWPGGVAVDTLGERVYWTDERLKCIGSATLEGEDIRI
LQMEETSNPFSLTVFNDMLYWSDAKRRTIQGTQKITGKGYQVLFKRPGQPFGLKVIHPLL
QAATESPCERLRCSHLCVLAPGPKAVCKCPSGLLLAEDGLTCSNLVTSAFLLLLSRSTVT
QIHLQAMHSAVSLKGWPEHLALLLPSMNEAATLDYSLREHTLYLADAGQASVGLFKLKET
GLVPRGQLLRLLGDAVTSMALDWVTLSLYWSSIKQPRLQVTSASGAHTAVLIRDAVGSLE
SIALHPLRGRVCFINLVRQEGGSVQPRVECSHMDGSRRLLVWAEAVRPTALVFSNSGNEI
YWADISSGVIASVGVDGSGFKAFQTGDGLTAFALSDEMLLWMTVNDTAKVWYRDKRQVQM
LWFEVNTGVVSMRAYSESSQRGSNLCTVDNGDCHHLCLAAPGGRMCMCAHDHLSVNGTRC
VPDQRCVAGSRSCLDGSTCLPLQKFCDGHVDCSDHSDENCVHLKAERVTKTTPQQDPSPT
PPSTSGSSNTTTDQDRRDDQDRRDDQDRRDDQDRRDDQDLLGDQSRRDDEDRRGDEDRRG
DQDRDQDRRGDQDRRGDQDRRGDQDPLDDQDRRDHHDLVRNLDAQQCDVSECSGNRVCGE
GDEAGSCVCSLGYSRESCQNRLFQGPLLYGAVAAGAGVVALAVLAFIIKRHKASRRASRV
VKDTSLTDLEKPLETPVETPVETPVETPVETPVETPVETPVETPVEMLSSQSQPNETHFI
EEVVAFVD
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctgtttgcttgggttggtcgtaattcttcatttcctagggtctttgcgaggt
gtaaatgcagaggtattggctcctattcaatgcaaactgggtaagaaactgtgcaacgat
ggaacagaatgcgtttcctataaccatgtgtgtgatggagagactgactgcagggatggt
tctgatgaaaaagactgtgctgttggctgcaacacagaccagttccagtgcgcgcatggg
aaaaagtgcatagaccggagtgaggtgtgtgacggagaagcccagtgtcaggaccgctct
gatgaggcggattgtgtggcgcacatggagggctgctcccaccactgtgacaacaagacc
cgctgcctccccgtcaccttcctctgtgacggggagagagactgccaggatggtacagac
gaggccaactgtgactcagatgaccgtgtcccaacctcaactcctgcaccccgcaattgt
cgcttgggatcaaagttctgtgacgacaagactgagtgtgttctctacaaccacgtgtgc
gacggagaggctgactgcacagatggctcggacgagaaggggtgtccatcaaaatgtgga
aatggggagttccagtgcgcccatgggaagaagtgcatcgaccaccgtcagctgtgtgac
ggcgtggcccagtgtcaggaccgctctgatgaggcggattgtgtggcgcacacggagggc
tgctcccaccactgtgacaacaagacccgctgcctccccgtcaccttcctctgtgacggg
gagagagactgccaggatggtacagacgaggccaactgtgctgacctgaggtgcaatggt
ggagaattccgatgcagcagtggtcagtgtgtgtccataggcatgcaatgtgacggccat
cccgattgcaaggaccgctctgacgaggagagctgcgccgagctgccagaatgccccacc
tcacatttgtgtccccacagcaaggagtgcctgatagaggaatggctctgtgacggctac
aaggactgcaaagatggcacggatgagaaggattgtaagtcggtcatgatggagtgtgga
gaattccagtggtcctgtacctccaagacccagtgtgtccccaaactctggaggtgtgac
ggagcgaaagactgtgaagacggaagtgatgaaacaggatgtggtattccaccttgcctc
cctcaccagtttcagtgtggtagcatggagtgtttggatgttgcactggtgtgtaacggg
atgaccaactgtgcggatggctctgacgagggaggagattgtcaaaccaagtgtcccttg
ccggccacagcccactgtgcccaggactgccacagcacaccacagggaatgcggtgctgg
tgtcaatcaggctacaagctccaggaagatggcatgtcctgtgttgacactgacgagtgt
aaagacagacacccaggtgtttgtagccagctgtgcaccaacacagagggctcctacaag
tgtcggtgtagcactggctacatcctggaggctgatggccgcagctgcaagatcacaggc
gagcccttcctgctggcgtcggttaaaacggagctgttccttttcggcctgctcggcagc
agtctggacgtcctcctgtcctcggccaagaaggccatcctctctgtggactatgactgg
aaggagcagaaggtgttctgggtcagcctggactctgagagcatcaggtggtcctcgctg
gaccagaagagcaaaggcacgctcatcaacggtgttaaatctgactgcattgctgttgac
tggatcgggaggaacttgtactggattgacggcgttgggaatcagatcattgccatcaga
ttaaccacagccgtcacgaacgccctggactacagcgtgatcctcgatgaggactttgag
cagcctcgctcgctggctctgctgccacagaagggaatcatgttctggtcggagattgga
aacgacccaaagatcgagcgggcggggatggacggctctgagaggagggtggtggtcgac
cgcaacctcagctggccagggggcgtggccgtggacaccctgggggagagggtctattgg
acagacgagagactgaaatgcattggatcggcgactctggaaggagaggacatcaggata
ctgcagatggaggagacctccaatcccttctctctcacagtgttcaacgacatgctctac
tggtctgatgccaagaggagaaccattcagggaacccagaagatcaccggaaagggttat
caagttctcttcaaacggccagggcagccttttggattaaaagtcatccatccgctgttg
caggcagcgacagagagcccctgtgagaggctgcgctgctcccacctgtgtgtgctggcc
ccggggcccaaggccgtctgcaagtgtccctctggcctgctgctggccgaggatggcctc
acctgctccaacctggtcacctccgccttcctcctgctactgtctcgctcaaccgtcacc
cagattcacctgcaggccatgcacagtgccgtcagcctgaagggctggcccgagcacctg
gccctcctgctacccagcatgaacgaggcggccacgctggactactctctacgggagcac
actctgtacctggcggacgccggccaggcctcggtggggctcttcaagctgaaggagacg
ggcctggttccccgggggcagctgctccgcctcctgggcgacgcggtgacgagcatggct
ctggactgggtcactctctccctgtactggagcagcatcaagcagcccaggctgcaggtg
acgtcggccagcggcgcgcacaccgccgtcctgatccgagacgccgtagggagcttggag
tccatcgccctgcacccgctcagggggagagtttgttttatcaacctggtcaggcaggag
gggggcagcgttcagccacgggtggagtgttcccacatggacgggtccaggagactcctg
gtgtgggccgaagcggtgcggcccaccgcgttggtcttttccaacagcgggaatgaaatc
tactgggctgatatcagttctggggtcattgcctcggtcggggtggatggttcaggattc
aaggcgttccagactggtgatggtctgactgcatttgccctcagtgatgaaatgctgctc
tggatgacggtcaacgatacagccaaagtgtggtacagggataaacggcaggtgcagatg
ctatggtttgaggtcaacaccggggttgtgagtatgagggcctacagcgagtccagccag
agaggctctaacctctgtactgttgacaatggagactgccatcacctgtgtctggctgcc
cctggcgggcgaatgtgcatgtgcgcccatgaccacctctctgtcaacggcacgcgctgc
gtccctgaccagcgctgcgtggcaggcagcaggtcgtgtctggatgggagcacatgccta
cccctgcagaagttctgcgacggccatgtggattgttccgaccactctgacgagaactgc
gttcacctcaaggctgaacgggtaaccaagaccacaccccagcaagaccccagtcctacc
cctccctctacctctggttcctcgaacaccaccaccgaccaggatcgccgggacgaccag
gatcgccgggacgaccaggatcgccgggacgaccaggatcgccgggacgaccaggatctc
ctaggcgaccagagtcgccgggacgacgaggatcgccggggcgacgaggatcgccggggc
gaccaggatcgcgaccaggatcgccggggcgaccaggatcgccggggcgaccaggatcgc
cggggcgaccaggatcccctggacgaccaggatcgccgggaccaccatgatctggtgaga
aacctggatgcccagcagtgcgacgtgagcgagtgcagcggtaaccgagtgtgtggggag
ggcgacgaggccggcagctgcgtgtgtagcctgggctacagcagagagtcctgtcagaac
cggctctttcagggccctctcttgtatggcgctgtagcagcgggcgctggggtggtcgca
cttgcagtcctcgctttcatcatcaaaagacacaaggcctccaggagggccagtcgagta
gtaaaggatactagtttgactgacctggagaaacctctggagacccctgtggagacccct
gtggagacccctgtggagacccctgtggagacccctgtggagacccctgtggagacccct
gtggagacccctgtggagatgctctcatctcaatctcaacccaatgagacccacttcata
gaagaagtggtggctttcgtggactaa
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