Osmerus eperlanus (European smelt): 134012151
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Entry
134012151 CDS
T10927
Name
(RefSeq) rab5 GDP/GTP exchange factor-like
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134012151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134012151
Membrane trafficking [BR:
oep04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
134012151
Protein recycling
Other Rab GTPase associated proteins
134012151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
zf-A20
DUF5601
DUF6279
Nuf2
CEBP_ZZ
DASH_Dad2
Motif
Other DBs
NCBI-GeneID:
134012151
NCBI-ProteinID:
XP_062307834
LinkDB
All DBs
Position
25:8335335..8339202
Genome browser
AA seq
480 aa
AA seq
DB search
MMGDKQRGIRVTQAELLCKDACGYYGNPAWQGFCSKCWRAQNRTAEAKQHDSGQSPDVDR
GSSLTFSKFEEKKSIEKGRRVTTMRRLFWGGQSPTKPQESSECQAAALKDFQSLDPGDFT
TFLKLLRKPTSQSLQSRCTAFLNTVEAYHDLPVQKQSDLVQDFYQSIAEYFHGLSETQVS
QMMEHIEKLIMTRLHKWVFCHDSCDDEQKDLALQRRIRSFNWITPQMLRVPFPDHEAEIT
RDPFLPAITAIIEMDAKRAPQDKLSCVSKCSQNIFQALSSSNSEPANADDFLSGLIYVVL
KANPPRLHSNMQYVIRFGLPHSLMAGESGYYFTNLSCAVAFIEKLDGSALNLSPEEFEGY
MQDRRASSVFLGASERRRVSRETQDQLEELRDRQERVTQGVDALREQLQQWVQSVEEQVD
AATTQASLAHKEITAQSEMKQSELVLAQPEMGKEDGKGLPVPELADPESNKDSSTTDTDC
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgatgggggataagcagcgagggatccgagtcactcaagcggaactactctgcaaggat
gcctgtggttactatggaaatcctgcatggcaagggttttgctccaagtgctggagagcg
cagaaccgaacagcagaagcaaaacaacatgacagtggacaaagccccgacgtcgaccga
ggatcttctcttaccttctcaaagtttgaagagaagaagagcattgagaagggccgtcga
gttaccactatgcggaggcttttctggggcgggcagtcccctacaaaaccccaagagtcc
tccgagtgccaggctgcagccttgaaagacttccagagcctggatcctggggacttcacc
acctttctgaaactgcttcggaaacctacctcccagagcctgcagtcgcgttgtacagcc
ttcctcaacactgtcgaggcttaccatgacctacctgtgcagaagcagtctgaccttgtg
caagatttttaccagagcatcgctgagtatttccacggtctttctgagactcaggtctct
cagatgatggagcacatagaaaagcttataatgacccgccttcacaaatgggtcttctgc
catgacagctgtgacgacgagcagaaagatttggcgctccagagaagaatacggtccttc
aactggatcacaccccagatgttaagggttccatttcctgatcacgaagctgagattacc
agagatcccttcctacctgccataacagccataattgagatggatgccaagcgagcgccg
caggacaagctttcatgcgtgtccaagtgcagccagaacatcttccaggctctctccagc
tccaacagcgagccggccaacgctgacgacttcctgtcgggtctgatctacgtggtgctg
aaggccaacccgccccgacttcactccaacatgcaatacgtcatccgcttcgggctgcct
cacagcttgatggcaggagaaagtggttactacttcaccaatttgtcttgtgccgtggcc
ttcatcgagaagctggacgggtcagcactcaatctcagtccagaggagttcgaggggtac
atgcaggatcgccgagcgtcctcggtgttcctgggagccagcgagaggcgtcgggtctcc
cgagagacacaggaccaactggaggagctgagggaccggcaggagagggtgacccaggga
gtggacgccctcagggaacagctacagcagtgggtgcagtctgttgaggaacaggtggac
gcagcaacaacccaggcttctctggctcacaaagaaatcacagcacagtcggagatgaag
cagagcgagctcgtcttggcccagccggaaatggggaaagaggatggcaaaggcctaccc
gtgcccgagcttgcggatccagaatctaacaaggacagttcaacaacagatacggactgt
tag
DBGET
integrated database retrieval system
