Osmerus eperlanus (European smelt): 134012164
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Entry
134012164 CDS
T10927
Symbol
spaw
Name
(RefSeq) southpaw isoform X1
KO
K04666
nodal
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04060
Cytokine-cytokine receptor interaction
oep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134012164 (spaw)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134012164 (spaw)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
oep04052
]
134012164 (spaw)
Cytokines and neuropeptides [BR:
oep04052
]
Cytokines
Transforming growth factors (RSTK binding)
134012164 (spaw)
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GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
CBM-like
Motif
Other DBs
NCBI-GeneID:
134012164
NCBI-ProteinID:
XP_062307865
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Position
25:complement(8656414..8662286)
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AA seq
420 aa
AA seq
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MGSFAQWVLCACLFCFSPLVSPTHESHEPRFQKSLNNSESGHVSTAFHPNRYPLYMMQLY
RSFKTSGFPQSLAVKPVSAHSDRPTLRDSDSVLSLIAKGCHQVENKWTVTFDMSSISAAD
DVQLSELRIRLPAFSASKRVTVDIYHSRQQDCKPSSTPCPEEKLLLGSFGASPGDAKSTW
KVFNVTALLKYWLHQGDTLAKSEATVEDVMEAEHGSGAEEDREVVGMPRRGHLGERHSKR
HLTTDRVMMVIFSKHNLHQGGHNVSTLIHTVERSKYVTMDRVSGGPNGRRHKRNRVERVR
LGGVIAATASPSEAVQRPLCRKVDMWVDFEQIGWNEWIVYPKRYNAFRCEGECPTPVDES
FQPTNHAYMQSLLRLYHPERVSCPSCVPTRLSPLSMLYYENDDVVLRHHEDMIVEECGCH
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgggaagttttgcgcaatgggttctctgtgcgtgccttttctgcttctccccgcttgtc
agcccgacgcacgagagccacgagcctcggtttcaaaagagcctgaacaattcagagtct
ggacacgtgagcacagctttccatccaaacaggtacccgctgtatatgatgcagctgtac
cgctccttcaaaacttcgggttttccacagtccctggctgtaaaacccgtgagcgcgcac
agtgacaggcccactctacgcgattctgactccgtactcagtcttattgcaaaaggttgc
catcaagtggaaaataaatggaccgttacctttgatatgtcctccatctccgctgcagac
gacgtacagctatccgaacttcggatcagactaccggctttttcagcctccaaacgcgtc
accgtagacatttatcactctcgccagcaggactgcaaaccgagtagcactccatgcccg
gaggagaagctgctcctgggcagttttggagcgtcccccggcgatgcaaagtccacctgg
aaggtattcaacgtcactgccttattaaagtactggctgcaccagggagacacgctggcg
aagtctgaggcgacggtggaggatgtgatggaggcagaacacgggagcggggcggaggag
gaccgggaggtggtgggcatgccccgtcgtggacatctgggtgagaggcacagcaagcgt
catcttacaactgaccgggtcatgatggtcatcttctccaagcacaacctgcatcaaggt
ggccataacgtgtccaccctcatacacactgttgagcgctccaaatacgtcaccatggac
cgggtcagtggtggaccgaacggccgacgccacaagagaaaccgggtggaaagggtacgg
ttgggtggtgtaattgcggccactgcgtctccgtctgaagccgtccagcggccgttatgt
cggaaggtggacatgtgggttgatttcgagcagatcggttggaacgagtggatcgtctac
ccaaagcgctacaatgctttccggtgtgaaggagaatgtcctacaccggttgacgagtcc
ttccagcccactaaccatgcatacatgcagagcctgttgagactctaccatcccgaaaga
gtgtcttgcccctcgtgcgtgcccacgcgcctcagcccgctgtccatgctgtactacgag
aacgacgacgtggtcctgagacatcacgaggacatgatcgtggaagagtgcggttgtcat
tga
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