Osmerus eperlanus (European smelt): 134012230
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Entry
134012230 CDS
T10927
Symbol
rab11fip1a
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134012230 (rab11fip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134012230 (rab11fip1a)
Membrane trafficking [BR:
oep04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
134012230 (rab11fip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF5401
Motif
Other DBs
NCBI-GeneID:
134012230
NCBI-ProteinID:
XP_062307954
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All DBs
Position
25:6729718..6741580
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AA seq
1337 aa
AA seq
DB search
MSLGDQSQQWYPTSVQVTVLQARNLRIKGKNGTNDAYAIMQLAKDKFSTSVADKCVAPVW
KEEATFDLPLFHQSNAERCTLHIIVMHRAQVGLDKHLGQAVINLIELHDNKSRKKTDWFK
LVDKNGKEDKVRGEVLLDVQFMRNNLSASMFDLSMQDKPRSRISKLKDKVRGKKKEGFSD
SASAIVPSVSQVMTDSEGEEGGHLDSPEAKKKSKLKSLFTPKSNLQRNISQSMSTLGTLP
EKNSSLSGSRSSGLNVESPDVKKKFKFLGHKRTGSNDSKVSLGPFSLLGRSKQSANDQNN
LCINGSHVYAEEAEPKSGSTLSLNSSGQGSVEDVRRHDSDVSADSLKGLSVPSYRQESAD
RDRALLEQRRHQEEEERRQAEERRRAEAKRLQEEEEGEEEERKRLAEQERRKRFLEDEAR
RKKLKEEEEERRKKGKDEEEERRKKSKEVEEEERRRQGEERRRLQAEEERLRLEEEQKQQ
EETKREEEKKRQEEASMSDRLSTLFGIIKKKEEPQPQTSSTKEEVPKPAPRKTSGDSEVP
GPRHSSNPFEEISLSPDTPNTSEETPGHPQKPPRTAQVPSAMVFLNRTAKVSAVKPRLVE
SKEPESPGSHTQGLQYPPSPPSSEYSLGSIPSESPVTFSSLHSSLAPPNTRRSSESHSST
ENLSIVVSHPNMSDKKRQAPLPPGIGNPNASSRSSPIKSSASGSSLLPITEDEISGESEM
AGAKHGKRPALPLPGHGVQGQTRWDHIIAEVNQKQREYMPHVAAKEMSVDGPEDESQHKN
RSISSQPRTALLPKPQATQPKEVPAISYKKLPAPGPPKPVVVASPRLVPEVSPAQKQSSA
RTNVSVEKINVSSSTVIHLTPSREMPSVKPKADPRRVLNKYPLTVIDAKSASQVESPRAS
QDVLESRSTNNLNVTPSNSPKEIPTAKPRQKVPSKEPVQQANPEKESIEEREKLKTANPD
LRRTSPVMMKHTDVNSRREKKPTPNSADGDDTKQILEPRTEAKENLIEPDPFPNSVVLSK
DPWALPEQSHGREDLFTGRIQKENKPQDEKMTRGDQKAIFAADNSMELPETGKAYKSDSN
DPSPFQRDISQRKKRPSPSLHSSVKQGSLDKQDLSRAEGNMTTTSEYPRLDGHEPQVDSS
VQNYIHGRERLETQAREKKAAVDQLASLSSSPIPSVLTTSDVFQSGVGETSPQAGVLSGG
KTQPKAWVSPSEAQLNSSGGGPALTPRRPHPVKPMNTGETQAPTSTPIGRELKTLDFTTG
KIKIPPANMVTGTAGSGPYTQLTQEELITLVVKQQTELTKKNDKIVELEEYIDNLLVRVI
EEQPSILLGLNSSKHAF
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaggtgatcaaagccagcagtggtatcccacaagtgttcaggtaacggtgcta
caggctcggaatttgcgcatcaagggaaagaatggaacaaatgacgcctatgccattatg
cagttggcaaaagacaagttttctacctccgttgccgataaatgtgtggcccctgtttgg
aaggaagaggctacgttcgatttgccactgttccatcaaagcaatgctgaacgctgcaca
cttcatatcatagttatgcatagagcacaggtgggacttgacaagcacctgggacaagct
gtgatcaacctaatagagcttcacgacaacaaatctcgcaaaaaaaccgattggttcaag
ctggttgacaagaatggcaaagaagacaaggtacgaggggaggtgttgctggacgtccag
ttcatgaggaacaacctgtccgccagcatgtttgacctctcgatgcaggacaaaccccgc
tcccgcatttccaagctgaaagacaaagtccggggaaagaagaaggagggcttctctgac
tccgcctcagccatcgtgccgtcggtcagccaggttatgacggacagcgagggggaggaa
ggcggacacctcgactcgccagaggccaagaagaagtccaagctcaaatccctcttcacc
cccaagtccaacttgcagcgcaacatctcccagtccatgtccacactggggactctgcct
gagaagaactcctccctgagtggcagtcgctcatcaggtctcaatgttgaatctccagat
gtgaaaaagaagttcaagttcctgggccataagcgcacaggcagcaacgacagcaaggtg
tccctgggtcccttctccctgctgggccgctccaagcagagcgccaacgaccagaacaac
ctgtgcatcaacggcagccacgtgtacgcagaggaggcggagccaaagtccggctccacc
ctcagcctcaacagctccggccagggctccgtggaagatgttcgccggcacgactcggac
gtctccgccgactccctcaaaggcctgtctgtgccgtcctaccggcaggagtctgcagac
agagaccgagccctgctggagcaacggcgccaccaggaggaggaggagaggagacaggca
gaggagagacgcagggcagaagccaagagactgcaggaggaggaggagggggaggaggag
gaacgtaagcgcctggcggagcaggagaggaggaagaggttcctggaagacgaagcgcgg
aggaagaagctgaaggaggaagaggaagagaggcggaagaaagggaaagacgaggaggag
gagaggaggaagaagtccaaggaggtggaggaggaagagaggaggagacagggggaggag
cgccggcgcctgcaggctgaggaggagcgtctgaggctggaggaggagcagaaacagcag
gaggaaaccaagagggaggaggagaagaaacgccaggaggaggcctccatgtccgacagg
ctgtccacgctgttcggcatcatcaaaaagaaggaggagccacagccgcaaaccagcagc
actaaggaggaggtgcccaagccagccccccggaaaacctccggagattcggaagtcccc
ggccctcgccactcctccaacccgtttgaagagatctccctcagtccggacaccccgaac
acttctgaggagaccccgggtcatcctcagaaacccccgcgaaccgcccaggttccctca
gccatggtgttcctcaatcgcacagccaaggtgtctgcagtcaagcccagattggttgag
tctaaggaacctgaaagcccaggctcacacacacaggggctgcaatatcctccctctcca
ccttccagtgaatactccctcggcagcatcccctctgagtcccctgtcacgttctccagc
ctacactcctcgctggcacccccaaatacgagaagaagctcagagtcccacagcagcaca
gagaacctgagcattgtagtatcccaccccaacatgtctgacaagaagcgacaagccccc
ctgccaccgggcattggaaaccccaacgctagctccagaagttctcccattaaatcttct
gcttcaggtagcagcctgctgcctataactgaggatgagatctctggagagagtgagatg
gctggagccaagcatgggaaaagaccagcgttacctcttcctggacatggagtgcaaggt
cagactcgatgggatcatataattgcggaggtgaaccagaaacagagggaatacatgcct
catgtagctgctaaggagatgagtgtcgatggtccagaagatgagtctcaacacaaaaat
agatccatctcctcgcaaccgaggactgctttgctcccaaaaccacaagcgactcaaccg
aaggaagttccagctatttcctataaaaagcttccggctcctggccctcccaaacccgta
gttgtagcgtctcctagactagtgccagaggtcagcccagctcagaagcagagttctgca
cggacaaatgtctctgttgagaagatcaacgtctcttcttccacagttatccatttgacg
cccagcagagaaatgccctcagtgaaacctaaagctgacccgaggagggttctgaataaa
tatcccctcacagtcattgatgccaagtctgcgtctcaggtggagagtccaagagcttcg
caagacgttttggaatcaagatccaccaataacctgaatgtaacgccatcgaatagtcct
aaggagataccaactgccaaaccgagacaaaaagttcccagcaaagagccagtccaacaa
gcaaatccggaaaaggaaagcatcgaagagcgggaaaagttgaagacggccaacccggac
ttgagaaggaccagtccagtgatgatgaaacacactgatgtgaattcaaggagagagaag
aaacctacgcccaactctgctgacggggacgacacgaaacagatactggaaccaagaacg
gaagccaaagaaaatttaattgaacccgacccgttccctaactctgtggtactctccaaa
gacccatgggcactcccagagcagagccatggaagagaggatctgttcactgggaggata
cagaaagaaaataagccacaagatgagaaaatgacccgtggtgaccagaaagcaattttt
gctgcagataactcaatggagctgccagagacaggaaaagcatacaaatctgactcaaat
gatccaagtccttttcagagagacatttcgcaaaggaaaaaacggccatctccatctctc
catagctcagtgaagcaaggttccctggataaacaagacttatctagagcagagggaaac
atgacaaccacttcagaatatcctagactggatggacacgagcctcaagtggactcttca
gtgcagaactatatccatggtagagaaaggttggaaacccaagcaagggaaaagaaagca
gctgtcgatcagctggcctcgctctcttcctcccccattccctcagtcctgactacgtca
gatgtctttcagtcgggtgttggagaaacgagtccccaagctggtgttctgtctgggggt
aagacccagcctaaagcctgggtgtcaccctcagaggcacagcttaatagcagtggaggt
gggcctgccctaacaccacgcaggcctcatccagtcaagcccatgaacacaggggagacc
caggcccccaccagcacccccatagggagagaattaaagactcttgacttcaccacaggg
aagataaagataccgccggctaacatggtgactggaacggcaggaagtgggccttacact
cagctcacccaggaggagctgattaccctggtggtcaagcagcagacggaactcaccaag
aagaacgacaagatcgtggagctggaagagtacatcgataacttgctggttcgtgtcata
gaggaacaacccagcatcctgcttggcctcaactcttccaagcatgccttttga
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