Osmerus eperlanus (European smelt): 134012234
Help
Entry
134012234 CDS
T10927
Symbol
neff1
Name
(RefSeq) low molecular weight neuronal intermediate filament isoform X1
KO
K04572
neurofilament light polypeptide
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134012234 (neff1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134012234 (neff1)
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134012234 (neff1)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
134012234 (neff1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Fib_alpha
MobL
ATG16
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
134012234
NCBI-ProteinID:
XP_062307964
LinkDB
All DBs
Position
25:6485343..6491495
Genome browser
AA seq
507 aa
AA seq
DB search
MSYSSDMYSGSSYRKIFGDAPRASGRMSVGSSPSRLSTGFRASPHRNYATSSSSYRKVGA
GRTFSSMPDSMDLTQSTAVTNEMKIIRTNEKEQMQGLNDRFVSFIEKVHNLEQQNKVLEA
EVTLLRQRHNEPSRLHDLYEQEIRELRARVEELTHEKSQMHLDCVQMNETLERMREKLDD
DTKLREEAENTLKNYRKDVDDATMSRLELEKKVESLLDEIAFLRKVHDEELHEMQTSLQA
SQQVSVEMDMGKPDLAVALKDIRAQYEVLSAKNMNQAEEWYHSKFASVSEAAARNTDNLK
QAKDDLSEYRRQVQARTLEIEALRGHNEALERQMADMEDRHSNEMGEMQETIQQLESALR
STKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLTSVSGAIQHSGYSGYSYSS
SRSYALGSSLPYRKSGAKPEQEEDEEEEEKEEEENEEEGEGEGEDGNDQEEGEGDEEEEE
EEEEEQKEKEKEKDTKKSGDAGKGTKS
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgagttattccagtgacatgtattccggcagctcttatcggaagatctttggggatgct
ccccgggcctctggccgcatgtctgtgggcagcagcccctctcgtctctccacgggattc
cgtgccagccctcaccgcaactatgccacctcatcctccagctacaggaaggtgggagcc
gggcgcaccttctcctccatgcccgactccatggacctgacacagtccacggccgttacc
aacgagatgaaaatcatccgcaccaacgagaaagagcagatgcaaggcttgaacgaccgc
ttcgtctccttcattgagaaggtgcacaacctcgagcagcagaacaaagtgctcgaggct
gaagttaccttgctgcgtcagcgccacaacgagccctctcgtctccatgacctgtacgag
caagagatccgtgagctgcgggcgcgcgtggaagaactgacccacgagaagagccagatg
cacctggactgcgtgcaaatgaacgagaccctggaacgcatgagggagaagctcgatgac
gacactaagctccgcgaggaagccgagaacaccctgaagaactaccgcaaggacgtggac
gatgccacgatgtcaaggctggaactggagaagaaagttgaatccctcttagatgagatt
gccttcctcagaaaagttcacgacgaggagttgcacgagatgcagacgtccctgcaggct
tcccagcaggtatctgttgagatggacatgggcaaaccagacctggctgtggccctgaag
gacatccgggcccagtacgaggtcctgtccgccaagaacatgaaccaggctgaggagtgg
taccactccaagttcgccagcgtgagcgaggccgccgcacgcaacacggacaacttgaag
caggccaaggatgatctgagcgagtaccgcaggcaggtgcaggcccgcacgctggagatc
gaggccctcaggggccacaacgaggccctggagaggcagatggccgatatggaggatcgc
cacagcaacgagatgggagagatgcaggagaccatccagcagctggagtctgccctgcgt
agcaccaagggtgagatgtcccgtcacctgcgtgagtatcaggacctgctgaatgtgaag
atggccctggacattgagatagcagcttacaggaagctcctggaaggtgaggagtgccgt
ctgacctccgtgagcggggccatccagcactctggctactctggctactcctactcctcc
agccgctcctacgccctggggtcctccctgccctacaggaagagcggagccaagcccgag
caggaggaggacgaggaggaggaggagaaggaggaagaggagaacgaggaggagggagag
ggagagggagaggatggaaacgaccaggaggagggcgagggagatgaggaggaggaagag
gaggaggaggaagagcagaaggagaaagagaaggagaaggatactaagaagtctggcgat
gccggcaagggcaccaagagctaa
DBGET
integrated database retrieval system
