Osmerus eperlanus (European smelt): 134012330
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Entry
134012330 CDS
T10927
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like
KO
K21072
A-kinase anchor protein 28
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134012330
Membrane trafficking [BR:
oep04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
134012330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
Ank
Ank_2
SOS1_NGEF_PH
PH_13
Motif
Other DBs
NCBI-GeneID:
134012330
NCBI-ProteinID:
XP_062308107
LinkDB
All DBs
Position
25:complement(4405233..4434474)
Genome browser
AA seq
1842 aa
AA seq
DB search
MELSRREVPLYVSTLFLTRGGNQGQAKVFALLPALEPLLEECEVFVVLEGSTLAHVIRVQ
RDVMLCFIVPGHNLAEVVLVHAYVCSDNSPLTFVGGASLEYIQDDAQELAEHLVTHSQCL
TSRDHSELSSLFSLGQETTRWAMDHHLALAVANLDIPPSWSLLSGPCGQDGSPRESILHL
AVRWGLWRLAELLLCQPGGLLAVSLPNEEGITPLQLAQAAGHPDMLELLSHPPNPLATPP
AGLSQVWADRSRLLRYAHHSENLTLTVRQNHVWNQNPPWNRHNDIRILRERLGDENFLRE
LKFFWRGSGRGEEREEVLDQPEEGVFPVSVHEGVGATEEKEPLMFCLNEEEEEDEEERSL
SETEKSQSLGGAETGPSSTLSAASRLATLIGHGQDQVYANAMLVDQGDKLEMKYRSPGEG
SWPAGWDEFRTSPRGGSHLQEPAPPHPWGPQTGALSPDMPCHSPPPPPPLPPPPHSPSPS
SPRASPFLSAGRAPSSSHSPGRLQRDGVLRRETPGETYAQSSSVEGADGDSGEEDILGHS
YPFTSPRKRPTLQSCLEERDSFDSSPDLTRTHSDSTQTAGKDPREAELRLRSYSYSSPKG
RRPRPRFTRDAAISDLAEDGVLFSRGTSLLQALSLSKPLSLLHPSKQKTNSQTEPSREKR
VAGLRKRAQSTVEERSLSLQHLTLSEFLKEIEDEEWDKYSVPSKAEADKYKVSRTFSFLK
SRMSSARSKTKVKGKEAKEVKEAKEVKEAKEKTEACNGLQSAPGSPSGASQEKSAAPMLK
IKASSFSQNSVVREGSLSSSPSSSSLPIMISRDRRDPATALSKSPSVSTARRRSEVTGVD
CIEGGTWPSDPLGEEESMEAPSVTQELVDAPLLSDLSAELLGLEAESWSLAVSPEFCRKY
DKHTVKRQDIIYELMQTELHHIQTLGVMADVFRRGMLEELQMDPASVSRVFPCLDALLQL
HCGLFSSLQERRLASTPPGDADYLIPSVGDVLLMHFSEDSAERMKQVYGDFCSHHTEAVN
LFKELQQQNKKLQVFVKQQSNNSVVRRREVPEFILLVTQRITKYPVLLERILQYTPESSQ
EHEDLSRTLAQVREILTAVDQSVRLYEEDQELQEVLSRVENKSLAKLKNGKSFRKQDLLG
HQRSLQHKGLVYWKTATGRLKETLCLLLTDVLVFLQEKDQRFIFAAVDQKPPVIPLQKLI
VREVANEERGMFLISASSAGPEMYEVHTPSREERNAWMRHIRQAVESCPEEEEEEEKAAE
TEEARRTVEARALKASSFQEALRGQDQRICSDLEEKLRLYAELTELTLHPPEPLPQRHLL
VHPDKDTETPPQASSLLAAALLEAEQLISSLQAQVCDPTPSDQVCDPTPSDQVCDPTPSD
QVCDPTPSDQVCDPSTPELYNCFSHDSFQESLWESDYLSTLSVSSTSLLSDGEWAGPDKF
PWRHAAELIGDSHGVQLKVADSVQSLTQLIYSLQAAVTLQDSWYEVQRLLLLKPERPSSC
FHGSTELERQKSMERRLSAGRKEEEERRSAERRSAVEWRLEEVEKVPKLQARLRQEQQRW
DRECQARLKQQGEQESALAQREQRCLLETERLRCERRELEEQQEEHQRSLQRLREGQQSV
ARERERLEAQQGATPLGRRHDGLPVAVPPDGSQGHSRSGSLDGNGSVFVNKAALLQTLQQ
PPNQNGQNQAVQPGQRKTRDSPIPIPAGHTPRLGLSLSPCLYNSLNTLLSQAHSKQGSEH
WSQTRYLPQQILQTHQDLLGPASRPANPFCPGFTTAHPGTNNNFGPPLDQLSSPRSDVVG
LGLYGEAYPLSASLGPLPAPQAYLCLGGPNGEDREEENIVYL
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggagctgagcaggagagaggtgcctctctacgtgagtacactgttcctaacgagagga
ggaaaccagggccaggcgaaggtgtttgcgttgctgcctgccctcgagccactcctcgag
gaatgtgaggtcttcgtcgttctagaaggatccactctggcccatgtcatcagagtgcaa
agagatgttatgctttgcttcatagtgcctggtcataacctggcagaggtggtcctagtt
catgcctacgtttgctcggataactcacccctcacgtttgtgggaggggccagtctagag
tacattcaggatgatgcccaggaactggccgagcacctggtgacccacagtcagtgtctg
acttccagggatcacagcgagctaagcagcctcttctccctgggccaggagaccactcgc
tgggccatggaccaccacctagccctggccgtggccaacctggacatccccccatcctgg
agcctgctgtcgggcccctgtggacaggatggctcccccagagagtctatcctccacctg
gcggtgcgctggggcctgtggcgactggctgagctgctgctgtgccagccaggaggcctg
ctggccgtgtccctgcccaacgaggagggcatcacccccctacagctggcacaggccgcc
gggcacccagacatgctggagctactttcacacccccccaaccccttggccacgccccct
gcaggtctgtctcaggtgtgggccgacaggtcccgcctcctcaggtacgcccaccactcg
gagaacctgaccctcacggtccgacagaaccacgtgtggaaccagaaccctccttggaac
cgacacaacgacatccggatcctgagagagagactcggagacgagaacttcctcagagag
ctcaagtttttctggcgtggttccggtcgaggtgaggagcgagaagaggtcctggatcaa
cccgaggagggtgtattccctgtgtccgtccacgaaggagtcggtgctacagaggagaag
gaaccactgatgttctgtctgaacgaggaggaagaggaggacgaggaagaacgatcactg
tctgagacggagaagagtcagtctttgggaggtgctgagacaggcccctcctccacgctg
tccgctgcctcccgattggccaccctgattggccatgggcaggaccaagtgtacgccaac
gccatgctggtagaccagggggacaagctggagatgaagtaccgttccccaggggagggc
agctggcctgctggctgggatgagttcagaaccagcccccgtggaggctcccacctccag
gagcccgctcccccccacccctgggggccccagacaggagccctcagccccgacatgccc
tgtcattcccctcctcctccccctccgctccccccgccgccccactccccctctccttcc
tctccccgggcctcccccttcctgtcggccgggcgggcacccagctcctctcactcccct
ggacgccttcagagagacggcgtcctccgcagagagaccccaggagagacctacgctcag
agttccagtgtggagggtgcagacggggacagtggagaggaggacatcctgggccactcc
tacccgttcacgtcgccacggaaacggcccacgctgcagtcctgcctggaagagagggac
tccttcgactcctccccggacctgacccgcacacactccgacagcacacaaaccgctggg
aaggatcccagggaggcggagcttcgcctacgctcctactcctactcctcccccaagggc
cgtcggccccgcccccggttcacccgggacgccgcaatctccgaccttgcagaagatggt
gtgttgttcagcagaggaacctccctcctccaggccctctctctctctaaacccctctct
ctgctccacccatccaagcaaaaaacaaacagccagactgagccctccagagaaaagagg
gttgctgggctccgtaagcgggcccagtccaccgtggaggagcgcagcctgtcactccag
cacctcaccctctcagagttcctcaaagagattgaggacgaggagtgggacaagtacagc
gtcccctccaaggccgaggcggacaagtacaaggtcagccgcaccttcagcttcctgaag
agccggatgtccagcgcgcgcagcaagaccaaggtgaaggggaaggaggcgaaggaagtg
aaggaagcgaaggaggtgaaggaggcgaaggagaagacagaggcgtgtaacggactccag
tcggctccggggtcaccgtctggtgcgtcgcaggagaagagcgcagcgcccatgttgaag
atcaaagcctcctccttctctcagaactccgtggtgagagaaggctccctctcctcctcc
ccctcctcctcctctctccctatcatgatctcccgagacaggagagacccagcaacagct
ctctccaagagcccctcagtctccacagccaggaggaggagcgaagtgacgggagtggac
tgcatcgaggggggcacgtggcctagcgaccccctcggcgaggaggagtccatggaggcc
cccagcgttacccaggaactggtcgacgcccccctgctcagcgacctatcagcagagctg
ctgggtctggaggcggagtcttggagcttggcggtgtccccggagttctgcaggaagtac
gacaaacacacagtcaagcggcaggacatcatctatgagctgatgcagaccgagctgcac
cacatccagaccctgggcgtcatggccgacgtgttcaggcggggcatgctggaggagctg
cagatggacccggccagcgtctcccgggtgttcccctgtctggacgccctgctgcagctg
cactgcggcctgttctcctcgctccaggagaggcggctggcgtccaccccgcccggggac
gccgactacctcatccccagcgtgggagacgtcttgctgatgcacttttcagaggacagc
gctgagaggatgaaacaggtgtacggggacttctgcagccaccacaccgaggcggtcaat
ctcttcaaggagctccaacagcagaacaagaagctgcaggtgttcgtgaagcaacagagt
aacaactcagtggtgaggaggagggaggtgcctgagttcatcctgctggtgacccagcgc
atcaccaagtaccccgtcctgctggagagaatcctgcagtacaccccggagagcagccag
gagcacgaggacctgtcgcgcacgctggcccaggtccgagagatcctcacggccgtggac
cagagcgtgaggctgtacgaggaggaccaggagctccaggaggttctgtcccgcgtggag
aacaagagcctggccaagctgaagaacgggaagtcgttccgcaagcaggacctcctcggc
caccagaggtcactgcagcacaaaggcctggtttactggaagactgctacgggcaggctg
aaagagacactgtgtctgctgctgactgatgttctggtgttcctgcaggagaaagaccag
cgcttcatctttgctgccgtggaccagaagccgcctgtgatccctctgcagaagctgatt
gtcagagaggtggccaacgaggagcgaggcatgttcctgatctccgcgtcctcggcgggg
cccgagatgtacgaggttcacaccccctcccgagaggagcgcaacgcctggatgagacac
atacgccaggcggtggagagctgccctgaggaggaggaggaggaggagaaggccgcggag
accgaggaggccaggagaacagttgaggccagagccctgaaggccagcagcttccaggag
gcccttcgggggcaggaccagcgcatctgcagcgacctggaggagaagctgcggctgtac
gcggagctgacggagctgacccttcacccaccagagcccctgccccagcgccacctgctg
gtccaccctgacaaggacacagagaccccccctcaggcctccagcctgctggctgctgcc
ctgctggaggcggagcagctgatttccagcctgcaggcgcaggtgtgtgaccccaccccc
tctgaccaggtgtgtgaccccaccccctctgaccaggtgtgtgaccccaccccctctgac
caggtgtgtgaccccaccccctctgaccaggtgtgtgaccccagcacacctgaactctac
aactgcttcagccatgacagcttccaggagtccctctgggaatcagactatctgagcacg
ctcagtgtgagctccacctctctgttgtcagacggtgagtgggcggggccagacaagttt
ccatggcgccatgcggcggagctgataggagattcccacggtgttcagctgaaggtggca
gacagcgtccagagtctcacccagctcatctacagtctccaggcagcagtgacactgcag
gacagctggtacgaagtacagagacttctcctcctgaagccggaacgcccctcctcctgt
ttccacggcagcacggagctggagagacagaagagcatggagcggaggctgtccgcgggg
aggaaggaggaggaggagaggaggagcgcggagaggaggagcgctgtggagtggaggctg
gaggaggtggagaaggtgcccaagctgcaggccaggctgaggcaggagcagcagcgctgg
gaccgagagtgtcaggctcgtctgaagcaacagggggagcaggagagcgcgctggcccag
cgcgagcagcggtgtctcctggagacggagaggctgcgctgcgagcgccgggagctggag
gagcagcaggaggagcaccagcgcagcctgcagaggctgcgggagggccagcagagcgtg
gccagggagagggagaggctggaggcccagcagggcgccacgccgctgggccggaggcac
gacggcctccccgtcgccgtcccgccggacgggagccagggtcacagtcgctcaggcagc
ctggacggcaacggctcagtgtttgtcaacaaggcagccctgctccagaccctccagcag
ccacccaaccagaacggccagaaccaggcggtccagccaggccagaggaagacccgggat
agccccatccccatcccagcgggccacacccctcgcctcggcctcagcctcagcccatgc
ctctacaacagcctcaacaccctgttgagtcaggcgcacagcaagcagggctcagagcac
tggagccagacacgttacctcccgcagcagatcctccagacccaccaggacctcctgggg
cctgccagccgccccgccaaccccttctgccccggcttcaccaccgctcaccccggcacc
aacaacaacttcggccctcctctggaccagctgagttccccgaggtcggacgtcgtgggc
ctgggtctgtacggggaggcctaccccctctccgcctccctcggccccctccccgccccc
caggcctacctctgcctgggcggaccgaacggagaagacagggaagaagagaacatcgtg
tacctgtga
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