Osmerus eperlanus (European smelt): 134012360
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Entry
134012360 CDS
T10927
Symbol
ttc28
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
oep Osmerus eperlanus (European smelt)
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Cilium and associated proteins [BR:
oep03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
134012360 (ttc28)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134012360
NCBI-ProteinID:
XP_062308135
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Position
25:complement(8160738..8250616)
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AA seq
1663 aa
AA seq
DB search
MERQATLKEKFSIFGSRTVGRAQRRVPEEGPGGGLSKAEFMDKVRQSHEACQRGDFQGAV
SLYSDALRADPQNCILYSNRSAALLKLGRHQAALDDASTARSLNPKWPKAYFRQGVALQY
LGRHADALAAFASGLAQDPKSLQLLVAWWRPPXSPPLRESLEPTYQQLQKMKLDKSPFVV
VSVIGQELLTANHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNAEKSTGYMQ
QDLEVAKTLGDQTGECRAHGNLGSAFFSKGNFREALTNHRNQLVLAMKLKDRELYRASAL
FETIRHEAQHSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYAPVTVEHILDTVTSHRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLG
EGVSEGGPDFQDGGGGGVVSGSSLEQHIASAREALGVESYYSRGGSSSETESEAGDLLDQ
QFEELNNKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGSLPRRSSGLGK
PPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERF
SLIAVPSIHGLGANAKTHPRRAGPASCGGVSMAAVVGNPRLPSSVMDRWLWGPMPSAEEE
ALMVAELLGCQPLAGPAATKERVMSSLTQAECAHFATHISWKLASLVLTPNPEGGPGGSA
GAGVGAAGRGAGAGRGGSGGRGRKGSLGSSYTIPEGLHLQDDGSDVESICDSPPLQEFLL
SAADILDLRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVAASK
VFVHAFYTALLNGTKASASLADAMKTVQSSKQFSHPSNWAGYMLIGNDVKLNSPSSLIGQ
ALAEILQYPDRARDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLT
AVGFRLDSAGPGIPAAVFFPTADPGDRLQHCSTTLQSLLGLPPPALQALCKLITASEAGE
QLINRAVKNMVGMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDL
CEVGQEEVALKTGKQANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSN
PLPMGYPSLPFSPPCLDNLASDAISVYSLSSVASTMSFASRSECDFLGHRPRGGASAHFS
VHKHPHVSRSRSSPHGAAAAAAGGSGGGGSGGGRGEEEEYEGFSIISSEPLGSHCDSLPL
PPGHGQRHLRGGRGVGGGACSAAGRGYAVSVSSRGSVSTPTSPVKSNLVPSPNSPFQKVG
KVSSSDTGESDQSSTETDSTVKSQEEKTTVPLDPQELAQKILEETQSHLRAVGSLQRAGA
GAGAGAGAEGAAAGSPSGRSTAFRSSETSAFSRPGSSASGRVQSSPRPKPPSRSSSLQKI
SSGYNSPAVSESSQREGSHPSPTLDSHAQFKLKYPSSPYSGHISRSPSNVSPSSGHQSPV
GSAPSPALSYSSTGSACSSSADVPDLDRLRRGMIDEKVQAIHNLKTFWANAAGQHQPPHL
GPVRAMRGPHAGGASKRDVLSLLNLSPRHCSPADAQDSLELREMGLPGGKSSTNGHHCSN
PRKVAPSPPISTSSTPGTRSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcaagcgactttaaaggaaaagttttcgatcttcggctctcgcacggtgggc
cgagcccagcgccgcgtgccggaggaggggccgggtggtgggctcagcaaggccgagttc
atggacaaggtccgccagagccacgaggcgtgccagcgaggggacttccagggagccgtg
agcctctacagcgatgccctgcgggccgacccgcagaactgcatcctctacagcaaccgc
tctgccgccctcctcaagctgggacgccaccaggccgcgctggacgacgcctccacagcc
cgctcgctcaaccccaagtggcccaaggcatacttccgacagggtgttgcccttcagtac
cttggtcgccatgccgacgccctggctgccttcgcctcaggcctggcacaagaccccaaa
agcctgcagctcctggtggcatggtggaggccgccatgaagtccccccctaagagagtct
ctggagccgacctaccagcagctgcagaagatgaagctggacaagagtccgttcgtggtg
gtgtccgtgattggccaggagctgctgacggccaatcaccacacggcgtccgtggtggtg
ctggaggcggcactgaagatcggcacctgcagcctcaagctgcgaggctccgtcttctcc
gccctcagcagcgcacactggtcgctcggcaacgccgagaaaagcacaggctacatgcag
caggatctggaggtggccaagaccctaggtgaccaaacaggagaatgccgtgcccatgga
aacctgggctcagcgttcttctccaaggggaacttccgtgaggccctgaccaatcacagg
aaccagctggtcctggccatgaagctgaaggacagggagctgtaccgggcgtccgctctg
tttgagaccatccgccacgaggcgcagcacagcaccgactacaagctgtccctgttcgac
ctgcagacgtcgtcctaccaggcgctccagagggtcctcgtcagcctcgggcaccacgac
gaggcgctggcggtggcggagcgcggacggacgcgggccttcgccgacctgctggtggag
cggcagacaggccagcaggactcggacccgtacgcccccgtcacggtggagcacatcctg
gacacggtcaccagccaccgcgccctggtgctctacttctccatggcggccgggtacctc
tacagctggctgctcgcccccggggctggtatcctgaagttccacgaggtgtacctgggg
gagggcgtgtccgagggcgggccagacttccaggatggcggcggcggaggtgttgtcagc
ggctcatctctggagcagcacatcgccagtgctcgggaggctctgggagtggagtcctac
tacagcagggggggctccagcagcgagacggagagcgaggccggggatctgctggatcag
cagtttgaggagctcaacaacaagctcaactccgtcaccgaccccacaggcttcctacgc
atggtgtccaggaacaacctgttcaacaggagctgccaaagcatgaccagcctgttcagt
aacaccatgtctccagctaaggatggctccctgcctcggcgctccagcggcctgggaaag
ccccccctcagagccctctacgacctgctcatcgctcccatggaggggggcctgatgcac
tccagtgggccggtgggcagacacaggcagctggttctggttctggagggagagctgtac
ctcatcccattcgctctgctgaagggcagctcgtctaacgagtatctgtacgagcgcttc
agcctcatagctgtgccctccatccacggcctcggagccaacgccaagacgcacccacgc
cgcgccggccccgcctcctgcggcggcgtatccatggcagcggtggtgggcaacccccgg
ctgccgtcctcggtgatggaccgctggctgtggggccccatgccctcggccgaggaggag
gccctgatggtggcagagctgctgggatgccagcccctggccggacccgccgccaccaag
gagagggtgatgagctccctgacccaggccgagtgcgcccacttcgccacccacatctcc
tggaagctggcttccctggtgctgacgcccaaccccgaggggggcccgggcgggtccgcg
ggggccggggtgggcgccgcgggccggggggcgggtgctgggcgtgggggcagcgggggg
aggggcaggaagggctctctggggagcagttacaccatcccggagggcctgcacctgcag
gatgacggcagtgacgtggagagcatctgtgacagccctcccctgcaggagttcctgctc
agcgccgcagacatcctggacctgcgcctgcccgtcaaactggtggtgctggggtcctac
caggagtccagcagcaaggtgacggcagacggtgtggtgggcctgacccgggccttcctg
gcggcaggggcccagtgcgtgctggtctccctgtggcccgtgcctgtggctgcctccaag
gtgttcgtccacgccttctacaccgccctgctcaacggcaccaaggccagcgcctcactg
gcggacgccatgaagacggtccagagcagcaagcagttctcgcacccctcaaactgggca
gggtacatgctgattggtaacgacgtgaagctgaacagtccctcgtctctgattggtcaa
gccctggcggagatcctccagtatccagacagagcgagagatgctctccgtgtcttactg
catcttgtggagaaatccctccagaggatccagaacggccagcgtaactccatgtacacg
tcccagcagagcgtggagaacaaggtgggcggcgtcccaggctggcaggccctgctgacc
gctgtgggcttccggctggactctgccggccccggcatccctgctgccgtgttcttcccc
acggcagacccaggagacaggctgcagcactgcagcacaaccctgcagtctctgctgggt
ctgcctcccccagcgctccaggctctgtgtaaactcatcactgcctccgaggccggggag
caactcattaacagggctgttaaaaacatggtggggatgctccaccaggtgctggttcag
ctccagactggggagaaggagcaggacttctccctgcttcccatccaggtgtccatcagc
gtccagctgtggaggctcccaggctgccacgagttcctggctgctctcgggttcgatctg
tgtgaggtgggccaggaggaggtggcgctgaagacaggcaagcaagccaaccgtcgaacc
atgcactttgcccttcagtccttgttggcactctttgactccacagagctacccaagcgg
ctcagcctggatagttcttcctccctggagtccctggcctccgcccagtccgtctccaac
cccctgcccatgggctaccccagcctgcccttctcccctccctgcctggacaacctggcc
tcggacgccatctccgtctacagcctgagctcggtggcctccaccatgagcttcgcatcc
cggtccgagtgcgacttcctgggccaccggccccgaggcggggcctccgcccacttctcc
gtccacaagcacccccacgtgtcccgcagccgctcctcgccgcacggggctgcggcggcg
gcggccggcggctcgggaggaggcggcagcgggggagggaggggggaggaggaggagtac
gagggcttctccatcatcagcagcgagccgctcgggagccactgtgactccctgccgctg
ccgccgggtcacgggcagcggcacctccgcggggggcggggggtcggcgggggggcctgc
tcggccgccggccggggctacgccgtgtcggtgtcgtcgcggggcagcgtcagcaccccc
acctcccccgtcaagagcaacctggtgcccagccccaactcccccttccagaaggtgggc
aaggtgagtagctccgacaccggcgagtccgaccagtccagcaccgagaccgacagcacc
gtcaagtcccaggaagagaagaccacggttcccctggacccccaggagctggcccagaag
atcctggaggagacccagagccacctgagggcggtgggcagcctccagagggccggggct
ggggccggggccggggctggggccgagggcgccgccgcggggtccccctccgggagaagc
accgccttccgctcctcggagaccagcgctttcagccggccaggaagcagcgccagcggg
cgtgtccagtcctccccccgccctaaacccccctcccgctcctcctccctgcagaagatc
agctccggctacaacagcccagctgtctccgagtcttcccaaagggaggggagccacccg
tcccccaccctggacagccacgcccagttcaagctgaagtaccccagttccccgtacagc
ggccacatctcccgctcgcccagcaacgtgtcccccagctccgggcaccagtccccggtg
ggcagcgccccgtcccctgccctctcttactcgtccaccggctcggcctgctccagctct
gccgacgtgcccgacctggaccgcctgaggaggggcatgatcgacgagaaggtccaggcc
atccacaacctgaagaccttctgggccaacgcggccggccagcaccagcctccgcacctg
gggccggtgagggccatgaggggccctcacgccgggggggcctccaagagagacgtgctg
agcctgctcaacctgtcccctcgacactgttcccccgccgacgctcaagacagcctggag
ctgagagagatggggctgccgggggggaagagctccaccaacgggcaccactgctccaac
cccaggaaggttgctccctcgccccccatctccactagcagcacccccggcactcgctcc
atcagacttcctgccggtaacggatacaagttcctgtcccctggcaggttcttcccttcg
tcgaaatgctga
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