Osmerus eperlanus (European smelt): 134012710
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Entry
134012710 CDS
T10927
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
134012710 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134012710 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
oep04131
]
134012710 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
oep03029
]
134012710 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134012710 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
134012710 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
134012710 (si:dkey-110c1.10)
Membrane trafficking [BR:
oep04131
]
Others
Actin-binding proteins
Myosins
134012710 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
oep03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
134012710 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
134012710 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_22
OVT1
Motif
Other DBs
NCBI-GeneID:
134012710
NCBI-ProteinID:
XP_062308236
LinkDB
All DBs
Position
26:7545435..7560324
Genome browser
AA seq
1680 aa
AA seq
DB search
MATVELYTKGASVWVSDPDAVWVSAQLLQDYKTGDQSVLLQLSDGRELQYPVAPPAGLPP
LGNPELLEGENDLTALSFLHEPAVLHNLSVRFLHYSSIYTYCGIVLVAINPYEQLPIYGE
EVIQAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGAGKTVSAKFTMRYFA
VVGGASEQTSVEEKVLASSPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQANEERNYHVFYQLCASRHLPEMRQLQLDAPEQFRYTSQGGQTEIPGTDD
VMDLERTRNAFTILGVLPDQQTELFRVLAAVLHLGNVHIQASGRGGERSYIDADDSSLAV
FSKLLGVEAGQMAHWLCHRRLPVGGELLVKPMTGQQACEARDALAKHMYGQMFSWTVLRL
NAALRAHREKPRSYIGVLDIYGFETFDKNSFEQFCINYANEKLQQQFNRHVFQLEQEEYV
REELLWNRIEFSDNQPCIALIEGHLGLLDLLDEECRMPKGSDESWARKLYDQHQNHQPSP
HFSKPRMSNSAFIILHFADSVQYECDGFLDKNRDTVFEEPINILRASQVFSHISSDLVAD
LFQQAPAGAAVELSGGKPSLANGSVRSGKRGHREHKLTVGFQFRQSLQLLMDTLNSTTPH
YVRCIKPNDVKEPFVFDPRRAVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRVLLRG
LQPRPQPQPRPQPQLQEACKQALPCLIPDPDQYCFGKTKVFFRAGQVALLERLRAERLRG
AGMVIQSRVRGWLARRRYTRIRQAALTVQRYTRGALGRRQALTLRYTRAALVLQKTFRML
AVRQLYQMIRQATLTIQAFTRGTLARREYRQVLCERAAVRLQAWVRGCRARRAYGRVRAA
VVLMQCCARRRAARREMLRRKAEARSVERIRQLNKGMEVKLMSLQLRADQEARDSSALRE
TLHAEREAHRAEAAGLRGALARLEAQRQEQPAPSPAPSPQQEEERRRLRERTALELLTLT
QEVQALKTEREELVRQKEDLQRQVVEQQMSQEECVRQAVSQAGVCLRGEVEEERRKYQGL
LREFTRLEQRYDNLRDMSLPSERSKGHRRTDSCQSLSMEPLSPVSAPFPGSPTFSPASAP
FPGCPTFSPASPEESRRVSVTSQDWSSWSKDTPMDTLMENMGVAKDTAVKMRADDLGHAY
DAVRVANKLLETQLRSQSEQQGVELKPPGREASADGQELLEAREQECVRLKRELQELRHT
VTLRTLLTHTAPPAAVQPPDGSCAAQARGGAVSGLLECRKRDEAKLMKILITELRADSAL
SLPPGLAAGVVFLCVRQADHAGDAARTHTLCGAAIAAMKAALKKHSKDADMTALWLKNAC
LLSDLLTQHCPRQDGQAGSIDAVPLTSDLSDLRRSLGDLCIQAYQQLLSITESRLKPIIV
PAMLETDTIPGLSASGVKPGGSRKRAGSDPRAAAGEEVDAPSMAGTLRVLAGLHSALSRQ
DLPPSLLGQAFHQLTHLLCAATLNSLLLRKDMCCWNRGLQIRYNVSLLEEWLRSRGLQAG
GAVATLEPLIQAAQLLQVGKKTEADAQALVQACTALSSQQIVKILTLYTPHSELEERVTL
NFIRSVQALLRGRSEGQPPHLLLDVKKVFPVTFPFLPPPALHADRLGIPESLKISFLRRV
NT seq
5043 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtggagttgtacaccaagggggcgagtgtctgggtttctgacccagatgca
gtgtgggtatcagctcagctcctccaggactacaagactggagaccagtctgtcctgctg
cagcttagcgatggcagggagctgcagtacccagtggcgccccccgctggcctgcccccc
ctggggaacccagagctcctggagggggagaacgatctgacagccctcagcttcctccac
gagccggccgtgctgcacaacctcagcgtccgcttcctccactacagctccatctacacc
tactgtggcatagttctggtggctataaacccgtatgagcagcttcctatctatggggag
gaggtgatccaggcctacagcggccaggacatggctgacatggagcctcacatcttctct
gtggccgaggaggcctaccgcaccatgaccagggaggagaagaaccagtccatcatcatc
agcggggagtctggcgcagggaagacggtgtccgctaagttcaccatgcgctacttcgcc
gtggtgggcggggcttctgagcagaccagcgtggaggagaaggtcctggcctccagcccc
atcatggagtccatagggaatgccaagaccacccgtaatgacaacagcagtcgttttggg
aagtacatcgagatcggcttcggcaggaagggagacatcatcggagcaaacatgaggaca
tatcttctggagaagtccagagtggtcttccaggccaacgaggagaggaactaccatgtg
ttctaccagctgtgtgcgtctagacacctgcctgagatgagacaactccaacttgatgcc
cctgagcagttccgttacaccagtcagggaggacagacagagataccgggcactgatgat
gtcatggacctggagcgcactcgcaatgccttcaccatactgggagttcttccagaccaa
cagacggagctgttccgcgtcttggcagctgttctgcacctggggaatgtccacattcag
gccagcgggagaggaggagagcgcagctacatagacgcagatgactcctccctggccgtg
ttctccaagctcctgggcgtggaggcggggcagatggcccactggctgtgccaccggcgg
ctgccagtagggggcgagctgttggtgaaacccatgacgggccagcaggcgtgcgaggcc
agggacgccctcgccaagcacatgtacggccagatgttctcctggaccgtgctccggctc
aacgctgccctgcgcgcccaccgggagaagccccggagctacataggagtgctggacatc
tacgggtttgagacgtttgacaaaaacagctttgagcagttctgcattaactatgccaac
gagaaactacagcagcagttcaacaggcatgtgttccagctggagcaggaggagtatgtg
cgtgaggagctgttgtggaacaggatagagttcagtgataaccagccctgcatcgctctc
atagagggacacctggggctactggatctgctggacgaggagtgcaggatgcctaagggc
tcagatgagagctgggccaggaagctgtacgaccagcaccagaaccaccagcccagccct
cacttcagcaagccccgcatgtccaactctgccttcatcatcctgcactttgctgactcg
gttcagtatgaatgtgatggattcttggacaagaaccgagacactgtctttgaagagcca
atcaacatcctccgagccagtcaggtatttagtcacatctcttctgacctggtggcagac
ttgttccagcaggctccagcaggggccgctgtggagctgtctggggggaagccctctctg
gccaatgggagcgtgcgctcggggaagagaggccatcgagaacacaagctgactgttggc
ttccagttccgtcagtctcttcagctgctgatggacactctgaacagcaccacccctcac
tatgtccgctgtatcaaacccaacgacgtcaaggaacctttcgtgtttgaccccaggaga
gcagtgcagcagctgagagcgtgcggcgtgttggagaccatccgcatcagcgctgctgga
tacccctccaggtggacctatgaagagttcttcagcaggtacagagttcttctgcgtggg
ctccagccccggccccagccccagccccggccccagcctcagctccaggaggcgtgtaag
caggccctcccctgcctcatccctgacccagaccagtactgtttcggcaagaccaaggtg
ttcttccgggcggggcaggtggccctgctggagcgcttgagggcggagcgcctcagaggg
gcgggcatggtcatccagagccgggtacggggctggttggcacggagacgctacactcgc
atccgccaggcggcgctcaccgtccagagatacaccaggggagcgctggggaggagacag
gccctgaccctgcgctacacccgggcagccctggtcctccagaagaccttccgcatgctg
gcagtgcgccagctgtaccagatgatccgccaggcaaccctcaccatccaggccttcacc
cgcggcacgctggcacgccgggaataccgacaggttctgtgcgagcgtgcggcggtgcgt
ttgcaggcgtgggtgcgtggctgccgtgcgcggcgcgcgtacggccgtgtccgggccgcc
gtggttctgatgcagtgctgcgcccggcggcgtgcggcccggagggagatgctgaggagg
aaggccgaggcccggtctgtggagaggatccggcaactcaacaagggcatggaggtcaaa
ctgatgagcctgcagctacgagctgaccaggaggccagggacagctctgctctgagggag
accctgcatgccgagcgcgaggcccaccgcgccgaggcggccggcctgcggggggcgctg
gcgaggctggaggcccagagacaggagcagccggcccccagccccgccccgtccccgcag
caggaggaggagaggaggaggctgcgggagaggaccgccctggagctcctcacactcaca
caggaggtgcaggccctgaagacagagagggaggagctggtaagacagaaggaggatctt
cagaggcaggtggtggagcagcagatgtcccaggaagagtgtgtgcgccaggctgtgtcc
caggccggtgtgtgtctgcgcggggaggtggaggaggagcggaggaagtatcaggggctg
ctgcgagagttcaccaggctggagcagagatacgacaacctgagagatatgagtctgccc
tctgagcgttcaaagggccacagaaggacagattcttgccagagtcttagcatggagcct
ctctctccagtttcggcccccttccctggctccccaaccttctccccggcctcggccccc
ttccctggctgcccaaccttctcccctgcctccccggaggagtccaggagggtcagtgtg
acgtctcaggattggagctcttggagcaaagacactcctatggatactctgatggagaat
atgggcgtagccaaagacacagcagtgaagatgagagcagatgatctgggacacgcctac
gatgccgtacgagtggccaacaagttactggagacccagctgcgtagccaatcagagcag
cagggggtggagctgaagccgccggggagagaagcctcagctgatgggcaggagctgctg
gaggccagagaacaggagtgtgtgagactgaagagagagctgcaggaactgagacacacg
gtcactctcaggacactgctgacacacacagcccccccagcagctgtgcagcctccagat
ggctcctgtgccgcccaggccagagggggcgctgtctcaggtctgctggagtgcaggaag
agagacgaggccaagctgatgaagatcctcatcacagagctgcgtgcggacagcgccctg
tccctgccccctggtctggctgccggagtggtgttcctgtgtgtgcgccaggcggaccac
gctggagacgccgctcgcacgcacaccctctgcggcgctgcgatcgccgccatgaaggcg
gctctgaagaaacacagtaaggatgccgatatgacggctctctggttgaagaacgcctgt
ctgctgtccgacctgctgacacagcactgccccagacaggatgggcaggctggttctatc
gacgcggttcctctgacatctgacctcagtgacctgaggcgttccctaggtgacctgtgc
atccaggcctatcagcaactgctctccatcaccgagtcccgcctcaagccaatcatagta
cctgccatgctggagactgacaccatcccaggtctgtccgcgtcgggggtgaagcctggg
ggttccaggaagagggcggggtccgaccccagggcggcggcaggggaggaggtggacgcc
cccagcatggcgggcacgctgagggtgctggcggggctccactccgccctgtcccgccag
gacctccccccctccctcctggggcaggccttccaccagctcacccacctgctctgcgcc
gccaccctcaactccctgctgctccgcaaggacatgtgctgctggaacagggggctccag
atacgctataatgtgagcctgctggaggagtggctgcgttcccggggtctgcaggcaggg
ggcgctgtggccacgctggagcctctgatccaggctgctcagcttctgcaggtggggaag
aagacggaggctgacgcccaggctctggtccaggcctgcaccgccctctccagccagcag
attgtgaagatcctgactctatacacgccccacagtgagttggaggagagagtgacgctc
aactttatcagatccgttcaggctcttctgaggggtcgttctgaaggccagcccccccat
ctcctcctggacgtgaagaaggtcttcccggttaccttccccttcctcccgcctccagcc
ctccacgcggaccgcctcggcatcccagaatccctcaagatctccttcctgcgccgagtc
tga
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