Osmerus eperlanus (European smelt): 134012828
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Entry
134012828 CDS
T10927
Symbol
atg4c
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04136
Autophagy - other
oep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134012828 (atg4c)
04136 Autophagy - other
134012828 (atg4c)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134012828 (atg4c)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134012828 (atg4c)
03029 Mitochondrial biogenesis [BR:
oep03029
]
134012828 (atg4c)
Peptidases and inhibitors [BR:
oep01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
134012828 (atg4c)
Membrane trafficking [BR:
oep04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
134012828 (atg4c)
Mitochondrial biogenesis [BR:
oep03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
134012828 (atg4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
134012828
NCBI-ProteinID:
XP_062308436
LinkDB
All DBs
Position
26:complement(10303222..10311042)
Genome browser
AA seq
481 aa
AA seq
DB search
MELLPTRWDGFQSPVVKMENKGTDEMEKLKTKFMSAWHNVKYSWALKTKTTFSRNSPVFL
LGKCYHFKNEEKDGRMDDSSAAPEEDLITGNVEAFRRDFASRLWLTYREEFPALPGSSLT
SDCGWGCMLRAGQMMLAQALVLHFLGRDWRWSEALTLQPLDTETRTTSAAKRLVASLEAS
LQGERDPGPKPRLQAPGGAEEADVHLREVYHRTLVSWFGDVAEAQLGLHRLVRLGLGLGR
QAGDWYGPAVVAHILRKAVEEATDPGLAGITAYVAQDCSVYSADVLDSHRVSGPQHAVTG
DAPPLTNSRAVILLIPVRLGGEKTNPEYFNFVKGILSLEYCIGIIGGKPKQACCIVGFQD
DSLIYMDPHYCQCFVDVSSSSPFPVQSFHCPSPKKMPFSKMDPSCTLGFYSRSIHDYERI
SQELAKVLKPSAKEKYPAFTFMPGHGRDYDLSAAVTPEKREWPFIRDTKRTTATAGDFVL
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaattgttaccgacacgctgggatgggttccaatcccctgtggtcaaaatggaaaat
aaagggaccgacgagatggagaaattgaaaaccaagttcatgtcagcgtggcacaatgtg
aagtacagttgggccttgaagacaaagactacattcagcaggaattccccagtgtttctt
ctgggaaaatgttatcatttcaagaatgaagagaaggacggccgcatggatgacagttcg
gcagcgccggaagaggacctcatcacggggaacgtggaggcgttccgcagggactttgca
tcccgcctctggctgacgtacagggaggagttccccgccctccctggctcctcgctgaca
tctgactgcggctggggctgcatgctccgagcggggcagatgatgctggcccaggccctg
gttctacatttccttgggagagactggaggtggtcggaggcgttgaccctgcagccactg
gacaccgaaacgagaaccaccagcgccgcaaagcgtctggtggcctccctggaagcctct
ctccagggggagcgggacccaggtcccaagccccggctccaggccccgggcggggcagag
gaggctgacgtccacctgagggaggtgtaccaccgcaccctggtgagctggttcggggac
gtcgctgaagcccagctggggctccacaggctggtgcggctgggcctggggctggggagg
caggctggggactggtacgggcccgccgtggtggcacacatcctcaggaaggctgtagag
gaggccacagatcctggtctggcaggaataactgcttacgtggcacaggactgctcagtg
tacagtgctgatgtcctggacagccacagggtctccggtccacagcacgcagtcacgggc
gacgccccgcccctcaccaacagccgagccgtcatcctcctcatcccagtccgtctggga
ggggagaagaccaacccagagtacttcaactttgtcaagggcatcctgagtctggagtac
tgcatcggcatcatcgggggcaagcccaaacaagcctgctgcattgtgggatttcaagat
gacagtctgatttacatggaccctcattactgtcagtgttttgtggacgtcagcagctca
agccctttccctgttcagtcttttcattgcccgtcgccaaagaagatgcctttcagcaag
atggatcccagctgcaccctgggtttctactcccgcagtatccatgactacgagaggatc
agccaagagctcgccaaggtactgaagccatcagcgaaggagaagtacccagcgttcacc
ttcatgccgggccacgggagagactacgacctctctgcagccgtgaccccagagaagaga
gagtggcctttcatccgggacaccaagagaaccacggccaccgccggagactttgttctt
ctctga
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