Osmerus eperlanus (European smelt): 134012945
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Entry
134012945 CDS
T10927
Symbol
hmg20b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related isoform X1
KO
K24650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134012945 (hmg20b)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
134012945 (hmg20b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF4763
MlaC
DUF4164
Motif
Other DBs
NCBI-GeneID:
134012945
NCBI-ProteinID:
XP_062308613
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All DBs
Position
26:complement(7592180..7596593)
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AA seq
324 aa
AA seq
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MGETITPLLASNGGRQSRDHNIIIMGGVKQEQGEGSHPRGPHSSETPHEECFVSVQPAKK
RGWPKGKKRKKVLPNGPKAPVTGYVRFLNARREQIRAQHPDLPFPEITKRLGAEWSRLNP
TDKQRYLDEAEREKVQYARELKEYQQSEAYQITTAKIQDKKVKREESPSVIINANSSGVS
NKGLEISPRFDVPMFTEEFLDQNKAREAELRRLRKANVEFEEQNGVLQKHISDMFAAKER
LEAELGQDELRTHALQRHLLVIKHTLVSSLSSIALPGTGETPSLGNLDSYLSRLSGALES
SPHEHRALLSQLRDVLGHLENEKL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaactatcacaccgctattggcttcaaatggaggtagacagagccgggatcat
aatatcataataatgggaggagtgaagcaggaacagggcgagggttcccaccctcgaggc
cctcactcatctgagaccccgcacgaagagtgtttcgtctccgtgcagccggccaagaag
aggggctggccgaagggaaagaagaggaagaaggttctccccaacggacccaaggccccg
gtcacggggtacgtccggttcctgaacgcacggcgcgagcagatccgggcccagcaccca
gacctgcccttcccagagatcaccaagaggctgggcgcagagtggagccgcctcaacccc
accgacaaacagcgctacctggacgaggcggagcgtgaaaaggtgcagtatgccagagag
ctgaaggagtaccagcagagcgaagcctaccagatcaccaccgccaagatccaagacaag
aaggtcaagagagaggagtctccctcagtcatcatcaacgctaacagctctggagtctcc
aacaagggcttggagatatctcccaggtttgatgtacccatgttcaccgaggagttcctg
gaccagaacaaagcccgggaggcggagctacggcgcctgaggaaggccaacgtggagttt
gaggaacagaacggcgtcctgcagaagcacatctccgacatgttcgccgccaaggagcgc
ctggaggcggagctagggcaggacgagctgaggacgcacgcactgcagcgccacctgctg
gtcatcaaacacacgctggtcagcagcctcagctccatagccctgccaggtacaggagag
acgccctcgctggggaatctggactcctatctgagtcgcctcagtggggcgctagagagc
agccctcacgagcaccgcgccctgctctcccagctgagggacgtgctgggccatctggaa
aatgagaagctgtga
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