Osmerus eperlanus (European smelt): 134013077
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Entry
134013077 CDS
T10927
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134013077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oep03021
]
134013077
03036 Chromosome and associated proteins [BR:
oep03036
]
134013077
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134013077
Coactivators
SAGA/TFTC/STAGA complex
134013077
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
134013077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
134013077
NCBI-ProteinID:
XP_062308822
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All DBs
Position
26:6448059..6455261
Genome browser
AA seq
830 aa
AA seq
DB search
MTACHVVGGACSARRYSHSDGYFEVDPSEWQLYLADSTLAFRNIKLTINMAAIEPPSVSE
TQDLPEKSSTSDTSDSLTASAVNGAASSNNPQEHEETAVAGPITSTTSTADADTFSDSVQ
TNQQSTHHATYVVPTTVSTVLTGKENSQTALAIVSQSTQSNADASNLKTGTVVSQAKPST
ADQSGTPQAPQLVAQVGPMTTMTKAPGKALVIAVPRPTAPQPTPRPTAPQPTPATPRPPS
TSVQLPASFQIPPGMVLIRSDSGQLMLVSQQALAQAQQGTKTSSNAASRPLTPQVSAATT
IKKTDNLSVIRVPPPPNMRVATTAQRAPVIKVIGTAAPTPQVVQAPHPIVRPVSQPRPQT
PIAKTNAPNVAPTTITRETLENVKKCKNFLVTLIKLASSGTHSPDMAKNVRELVRSLLDG
SIEPEEFTDRLYRELKSSPQPYLVPFLKKSLPAVRQLTPNPQLFIQQVDQPKPQAPASKG
PTPTARTPSLLSPNVQPSAAIAGRQPYKPAQLVIQHPRGVAGMPAVTSSASSCRILTVSD
RTVAKPIVLQSGQHHTGAIFRRPPFKAFASSSQTHTFKHSGGSYREDDDINDVASMAGVN
LSEENARILATDSAMVGSVVQSCRDEPFLPPGPLLTRILHAGEAVGVSEVGPDVVSLVSH
ATQERLRELLEKVTVVAQHRKMALKEDFRHTQVSDVRSQLRFLEQLESLEKQRRDEEERE
KLLRFARSRSNTEDPERQLLKQRAKELQQLEQAQLQHREANLTALAAIGPRKKRPQDSTG
TQAGGASSGLSVLQRAGVRRVTRVSLRDLLFCMEQDPALRHSLALYNALL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatgccatgtagtcggaggcgcatgttctgcgagaaggtatagccacagtgac
ggttatttcgaagtggatccaagtgaatggcagttatatttggcggatagtaccctggcc
tttcgaaatattaagctcacgataaatatggcagccatcgagcctcccagtgtaagtgaa
actcaagacttgcccgagaaaagttcaacttcagacacatcagatagcttgacagcatct
gcagtaaatggcgcagcgtcgagtaataaccctcaagaacatgaagagacagccgttgct
ggcccgatcacctctaccacaagtaccgctgacgccgacactttttcggacagtgttcaa
actaaccaacagagcacacatcatgcaacatatgttgtaccaacaactgtatcgacagtt
cttactggcaaagaaaactctcaaacagcattggcaatcgtctcacaatcaactcagagc
aacgccgatgcttcaaatttgaaaacaggaacggttgtgtcccaagcaaaaccaagcaca
gctgaccagagcgggaccccacaagctccacaacttgtggcacaagttggaccaatgacg
accatgactaaagcaccgggcaaagcattagtgatagctgtgcctagaccaacagctcca
cagcctacgcctagaccaacagctccacagcctacgccagcaacaccgcgacccccgtct
acatccgtacagctacccgctagcttccagataccgccaggtatggtgctcatccgcagt
gatagcggtcagctgatgttggtttcacagcaagctcttgcccaagcccagcagggaacc
aaaacatccagcaatgctgcttccagacctctaaccccacaggtgtctgcagcaactacc
atcaaaaagacagacaacctgtctgtgatcagggttcctccccctcccaacatgcgtgtg
gccaccacagcacaaagagctcctgtgattaaggtgatagggacggccgctcccacacct
caagtagtccaggcaccacatccaattgtgcggccagtgtctcagcccagaccccagacc
cccatcgcgaaaacgaacgcccctaatgtcgcccccactacaatcacacgggagaccttg
gagaacgtgaagaaatgcaagaacttcctggtgacgctgataaagctggcttccagtggc
acccactcccctgacatggccaaaaatgtcagagagctggtcaggagtctgctggatgga
agcatagaacctgaggaattcaccgacagactatatcgcgagctgaagtcctctccgcaa
ccatacctggtccctttcctaaagaaaagcctgcccgctgtgcgccagctcaccccgaat
ccccagctcttcatccagcaggtggaccaacccaagccccaggctccggcctccaagggc
cccacccccaccgcccgcaccccttccctgctgtcccccaacgtccagccctccgccgcc
atcgctgggagacagccttacaagccggcccagctggtgattcagcatcccaggggtgta
gccggtatgccagctgtgacatcatcagcctcgtcctgtaggatcctgactgtgtctgac
aggaccgtggccaaacccatagtcctccagtctggacagcaccacacaggtgccattttc
cgacgtccgcctttcaaagccttcgcctcctcatcccagacacacacctttaagcacagt
ggcggctcctacagagaggacgacgacataaacgatgttgcctccatggccggggtcaac
ctgagcgaggagaacgcccgaatcctagccaccgactcggccatggtgggctctgtggtg
cagtcgtgtcgcgacgagcctttcctgccccccggccccctgctcacacgcatcctccac
gccggtgaggctgtgggcgtgtcggaggtggggccggacgtggtcagcctggtttctcac
gccactcaggagcgcctcagagagctgctggagaaggtcactgtggtggcacagcaccgc
aagatggccctcaaggaggatttccgccacacacaggtgagcgacgtgcgctcccagctg
cgattcctggagcagctggagagtctggagaagcagaggagagacgaggaggagcgtgag
aagctgctccgcttcgccaggagtcgatcgaacacagaagaccctgaaagacagttgctc
aaacagcgggccaaagagctgcagcagttggagcaagctcagctccagcacagagaagcc
aacctgaccgccttggctgccatagggccccgcaagaagaggccccaggactccacggga
acccaggctggaggggcgagcagcggcttgtcagtgctgcagagggccggtgtgaggagg
gtcacccgggtatccctgagagacctgctgttctgtatggagcaggaccctgccctgcgc
cactccctggccctgtacaatgcactgctctga
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