Osmerus eperlanus (European smelt): 134013078
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Entry
134013078 CDS
T10927
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03440
Homologous recombination
Brite
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
134013078 (rad54l)
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
DEAD
Rad54_N
Motif
Other DBs
NCBI-GeneID:
134013078
NCBI-ProteinID:
XP_062308823
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Position
26:6434024..6438696
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AA seq
743 aa
AA seq
DB search
MRRSLAPSQLAKRKHGGDSSEDEDWDPEEITKRRRKGESKGSRENYISPFRKPLTQLTNR
PECLDSNTHEAFIRSILSKPFKIPIPNYTGGLGIRALGLKKTGVRKALHDPFEEGALVLY
EPPVVSAHDLIKAEKEKLPVHVVVDPILGKVLRPHQREGVKFLWDCVTGRRLPDSYGCIM
ADEMGLGKTLQCIALMWTLLRQSPDGKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRIAPV
AIDGGSKEEIDRKLVNFISQNGLRVPTPILIISYETFRLHAAVLHKGKVGLVICDEGHRL
KNSDNQTYQALNAMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFEIPI
LKGRDAAASDKDRQSGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQT
ELYKQFLRQAKPIESLQQGKVSMSSLSSITSLKKLCNHPALIYDKCVEGEEGFEGALDLF
PSGYSTKAVEPQLSGKMLVLDYILAMTRSTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYV
RLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDE
QAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGEL
RELFSLSEDTVSDTHDRFRCRRCVNGRQVRPPDDATDCTCDLSQWHHCADKKGLRDPVLQ
ASWDAAVSFVFHQRSHEDQRGVV
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaagccttgctccaagtcagcttgccaagaggaaacatggaggcgattcatca
gaagatgaagattgggacccagaagaaattaccaaacggcgtagaaaaggagaaagcaaa
ggcagtagagagaactacatctcccctttcagaaaacctttgacgcagttgaccaaccgg
cctgagtgtttggacagcaatacgcatgaagccttcattcgaagtattctgtcaaaacct
ttcaaaatcccaataccaaactacacaggtggactgggaatcagagctctgggcctgaag
aagacaggggttaggaaggcgcttcacgaccccttcgaggaaggtgcactggtgttgtat
gagcctccagttgtaagcgctcacgacctcatcaaagccgaaaaagagaaacttccggta
cacgttgtcgtggatccaatacttggaaaagtactccgaccccatcagagagagggggtg
aagttcctgtgggactgtgtgacggggaggcgccttccagactcctacggttgcatcatg
gcggatgagatggggctgggcaagaccctccagtgcatcgctctcatgtggaccctgctg
cgccagagccccgatggcaagcccgagatcgacaaggccatcgtggtgtcgccctccagc
ctggtccgcaactggtacaacgaagtgggcaagtggctcggaggacggatcgcgccggtc
gccatcgacggtggttccaaggaggagattgacaggaaactagtgaacttcatttcccag
aatggcttgagggtgcccactccgattttaatcatttcctacgagactttccgccttcac
gctgccgtcctgcacaaggggaaagttgggctcgtcatctgtgacgagggtcatcgactt
aagaactctgacaaccagacgtaccaggccctgaacgccatgagtgcccagaggagagtg
ctcatctcagggacacccatccagaacgacctcctggagtacttcagccttgttcacttt
gtcaacgccggcatcctgggaactgctcaggagtttaaaaagcggtttgagattcccatc
ttgaaagggcgggacgcggctgcaagcgacaaggacaggcagagcggagaggagaagctc
aaggagctcatcagcattgtcaacaggtgcttgatccgaaggacatcggacatcctctcc
aagtatctccctgtgaagatcgagcaggtcgtctgctgcaggttgaccccgctgcagact
gagctgtataaacagttcctgaggcaggccaagcccatcgagagcctccagcagggcaaa
gtcagcatgtcgtcgctctcctccatcacctccctgaagaagctctgcaatcacccggct
ctcatctacgacaagtgcgtggaaggggaagagggctttgagggggccttggatctgttc
ccgtcggggtactccaccaaggcagtggagccccagctctctgggaagatgctggtgctg
gattacatcctcgccatgacgagaagcacgacgagcgacaaagtggtgctcgtctccaac
tacactcagacactggacctctttgaaaagctgtgtcggtctcgaagatacctctatgtt
cggctcgatggcaccatgtccatcaaaaaaagggccaagatagttgagagattcaacagc
ccatctagtccggaattcatcttcatgctgagcagcaaggccggtgggtgtggcctgaat
ctgattggcgccaatcgcctggtgatgttcgaccctgactggaacccggccaacgacgag
caggcgatggctcgggtctggagggacggccagaaaaagacctgctacatctacagactg
ctctcgacggggacgatcgaggagaagatcctgcagaggcaggcccacaagaaggccctg
agcagctgcgtggtggacgaggagcaggacgtggagcgccacttctccctgggggaactc
cgggagctgttctccctcagcgaggacaccgtcagcgacactcacgacaggttccgctgc
cggcgctgcgtgaacggcaggcaggtgcgccctccggacgatgccaccgactgcacgtgt
gacctgtcccagtggcaccactgcgctgacaagaagggactcagggaccccgtgctccag
gcctcctgggacgccgccgtgtccttcgtgttccaccagcgctctcacgaggaccagagg
ggcgtcgtgtga
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