Osmerus eperlanus (European smelt): 134013395
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Entry
134013395 CDS
T10927
Symbol
rac1b
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1b
KO
K04392
Ras-related C3 botulinum toxin substrate 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04010
MAPK signaling pathway
oep04145
Phagosome
oep04148
Efferocytosis
oep04310
Wnt signaling pathway
oep04370
VEGF signaling pathway
oep04510
Focal adhesion
oep04520
Adherens junction
oep04530
Tight junction
oep04620
Toll-like receptor signaling pathway
oep04810
Regulation of actin cytoskeleton
oep05100
Bacterial invasion of epithelial cells
oep05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134013395 (rac1b)
04310 Wnt signaling pathway
134013395 (rac1b)
04370 VEGF signaling pathway
134013395 (rac1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134013395 (rac1b)
04148 Efferocytosis
134013395 (rac1b)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134013395 (rac1b)
04520 Adherens junction
134013395 (rac1b)
04530 Tight junction
134013395 (rac1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
134013395 (rac1b)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134013395 (rac1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134013395 (rac1b)
05100 Bacterial invasion of epithelial cells
134013395 (rac1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134013395 (rac1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134013395 (rac1b)
04031 GTP-binding proteins [BR:
oep04031
]
134013395 (rac1b)
Membrane trafficking [BR:
oep04131
]
Exocytosis
Small GTPases and associated proteins
Rho GTPases
134013395 (rac1b)
Endocytosis
Lipid raft mediated endocytosis
Arf6-dependent endocytosis
134013395 (rac1b)
Macropinocytosis
Ras GTPases
134013395 (rac1b)
Others
NADPH oxidases (Nox) and associated proteins
Nox associated proteins
134013395 (rac1b)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134013395 (rac1b)
Exosomal proteins of other body fluids (saliva and urine)
134013395 (rac1b)
Exosomal proteins of colorectal cancer cells
134013395 (rac1b)
Exosomal proteins of bladder cancer cells
134013395 (rac1b)
GTP-binding proteins [BR:
oep04031
]
Small (monomeric) G-proteins
Rho Family
Rac/Cdc42 [OT]
134013395 (rac1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
CagD
Motif
Other DBs
NCBI-GeneID:
134013395
NCBI-ProteinID:
XP_062308958
LinkDB
All DBs
Position
2:11382231..11391756
Genome browser
AA seq
192 aa
AA seq
DB search
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRRRKCSLL
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccataaagtgtgtcgtcgtcggggacggagcggtgggtaagacatgcctgctt
attagctacaccaccaatgccttcccaggagagtacatccccacagtgtttgacaactac
tctgccaatgtgatggtggatggtaagccggtcaaccttggtctctgggatacagcagga
caggaagattatgacagacttcgtcctttgtcctacccacagactgatgtcttcctgatc
tgtttttctctggtgagccctgcctcatttgagaacgtccgtgccaagtggtacccagag
gttcgccaccactgtcccaacacacccatcatcctggtgggcaccaagctggacctgagg
gatgacaaggacaccattgagaagctcaaggagaagaagctcactcccatcacctaccca
caaggcctggctatggccaaggagattggggcagtcaagtatctggagtgttcagccctg
acccagcgaggcctgaaaacggtgtttgacgaggcgatacgggccgtcctctgccccccg
cccgtgaagaagaggaggaggaagtgctccctgctctaa
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