Osmerus eperlanus (European smelt): 134013528 Help Entry 134013528         CDS       T10927                                  Symbol dchs1b Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism oep  Osmerus eperlanus (European smelt) Pathway oep04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:oep00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     134013528 (dchs1b)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:oep04515]     134013528 (dchs1b) Cell adhesion molecules [BR:oep04515]  Cadherins   Cadherin related    134013528 (dchs1b) SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_FAT4_N Cadherin_CELSR2_9th Ig_Cad99C_N Ig_CLSTN Cadherin_2 Rep-A_N tRNA_anti-codon DUF223 C1orf162 CADH_Y-type_LIR TMEM154 He_PIG Motif Other DBs NCBI-GeneID:  134013528 NCBI-ProteinID:  XP_062309019 LinkDB All DBs Position 27:3455274..3489187 Genome browser AA seq 2969 aa AA seqDB search MDVRLSEGTIEDINKDTCIANALLQVVNLRRIDGPTTRYRLMMSDGRHSFSSFMLASQLN RLVDEGHLEIHCVCNVKKTATNTIKDGRQVVIILEMDVVKSAKDIGGKIGSPTPYLGGQT SSPQKAAQILSSPARALAPPSPAPPQSPPTASSSRGGYGRGYGRGKKTASVGPLSPGPSP TKPAKMVPIASLNPYQSKWTIRARVTNKSSIRTWNNSRGEGKLFSFEIVDESGEIRITAF NKEVDKFFSLVEAGKVYYISRATLKVANKQFNPLKNDYEMSLHADSSILPCDDSREVPIV QCHFVPIAELENRDKDAILASSPQGGLSAVARVRVSVVDINDNRPSFYPVTYTVSLSAHS PPGTSVVKVTANDPDAGDNGKVTYRALPGGGSAFFTLNKDTGVISLSRSLHGKANTVISM VISAQDGGGLTAPANARVNVSVVAGSVAPPVFEQAQYFFTVSEDVLRGTEVGVVRASKTG GPKDVSYSISSGDPDGFFTVDPSSGALRTALPLDHEALASLDLEVQARSGSPPAFGTARV RVAVSDVNDNAPSFLPSSSESLLLPEVTKMGTVIYRVQAADRDSGPNGQLSFDLASAGAA GSGGGGQRTFGVDRGSGELRLIGTLSYESAPRYDLQVVAKDGGAPQLSSTFTLVVHVQAQ DAQGPAFDTLTYRVELRENTALSTRFLQVRALNREAGGGNGNGGSSSASSPVTYRLRPDG DAAGFGVAPDSGWLFVRSSLDREAKDMYLLTVLATSGRGAAGRTGSATVRVTVTDENDNA PKLSQDRVFLAVRENLPAGMGFGRVSATDRDAGQNARLSYRLLHTDRHFQINSQTGEIST RVNLDREQQSSYQLVIVVQDGGTPPRSATGTAHITVLDENDNAPSFSHGHPDKELLLQVM EGLSSGSVLGTVTAKDPDEGENGTVYYSLSGSRAERFSLNPSTGELRSSSPLRRLERAEY TFTVTASDHGAPGLSSTCLHLLQVLGTSKSAPKPNTLSMTLSTVEGSAPGSVIGSVRSRD QREPVPSEGQVTYLVVGGTDREGTFMVERSSGDVYLVRELDYEEGSRYTLHVEVSDFSRD FPASHRVQLDIYVQDSNDHAPQFTEDPVTVVIPENAEPGSSVYTFQASDKDGSGPNSEVH YSIEHRWPETPDLLTLDPSTGVLTLGQSLDRETTPSLYLVVRATDSATDPAQRRWGSVTA RLFVTDVNDNAPLFSSPSAVSVMEDQPVGFVVVYVMARDEDEGENGRVSYRIQSGNSAGR FHLNPNTGSLSILKPLDREEQEVFNLTVVAEDHGVPQLSSSQVVCVQVIDVNDEPPLFQR AEFEAQVTENQGAGTVVLAVTATDRDQGSNGQVTYGGLTEEGFTIDPSTGVITITKTLDR EMQEHYTLTVYAKDGGLPPNFAKAVVRVSVQDENDNAPAFGRPWYTLEVPENQPAVELCT LRASDPDTGANGDLEYRITAGDPNGDFRLHASSGALSTSRPLDRERKAGYTLVVTSLDRG SPPLSGTATVEVTVLDVNDNSPAFAAGSFSVDVSEDAAEGSLVLEVTATDADEGLNGRVL YFLSREARGAFAVDEKSGRVATTTPLDREKRASYSFQVFAVDLSPAAPRNTSAQVTVTIQ DVNDNAPFFIQDPLVVEVSGLQSQRVVATMRAEDKDFGANGSVFYRFAAPARGFSINSLT GEIQATEPPGGLTQVQRTLLVEAMDQGSPAQSSLGVVVVYVREQQYQGIRFSRNARDVSI QENAEQGTAVAQAQAQYPDGTRSGISYSLFSGNREHAFRISSATGEIWVQSPKGLDFEDT PRLRLVVKAETASSTSYMAVNLILQDVNDNLPRFQLQNYVAYMREAQGYEMPIIQVVAED VDQGQNGQVTYSIQQSGGMSGLFKIDPVTGSITTAAIMDREIWTQARLVITATDKGSPRL AGSATLTVIIVDQNDNSPTIPLPREIRIPENTVIGTEITLVTGNDVDSSPALAYSLQLDP LSLGRFGIHRYSGGVSLTGALDFEERTWYTLTVRATDSQHQTEANITILVEDINDNAPTF TQDLYQITLPEHSPPGSVVVTVTATDSDSGENGKVTYRVMSSTQEGFYIDPSNGTLFINQ RAEFDPEKASVSVVIEARDGGSPTLSSLTTVQVHLSDVNDHAPVFHQSEYRATVSEDTIA GATILTLEAFDADLSRENCGFDFAIASGNGGNAFQIESSVRFLEGRGFQTVGTLVLAEGL DFEATPVYNLTVVVSDRGVPQRSSSVAAVIAVGDVNDNPPAFSRAEYSVSLSEGAAAGTE ILRLTATDPDSAPNAEVQYSISSGDELHLFTVDQWSGALRLQRALDREHRPSHVVIIQAS DGQGHFALAPVAVEVKDVNDNRPFFPVEILTASIKENQPVNTAVTVLHAIDHDTGVFGQL RYSLLERSGPGKEAFAVDRNSGEVRARASFDFEKVNSFNFVALATDAGNHSATVTVQVYV TGEDEYDPLFASPEFSFEVPEGAKKGQSIGRVQASDEDGGVDGIILYSLAGPSPYFDVNK TTGDVLLKVDGSGGGSAGGSGRAKREARVMTLDVSAHSPLETSRVAKAQLTIDVTNTGFG LAPDVNVLLVSIIAVSLGVIVLLVVMAIVVFLVKSRRRKKSQEAGNRTVSGTPLQKLDQS KPGAGGSERIYHQALPGYVADQGGAGGGPYTRGGSLDPSHSSGRGSAEAAEDDEIRMINE YPRVASITSSMQEHISARGPDSGIQQDADQLSDISCEPAALEGSAWFKGKKLGSSVSGTL LSGQLPVYRDEGGGYLGVGRGLNISHPKDYAFPEDGKPHVDGSLTAIVASDEELRGSYNW DYLLNWCPQFQPLANVFTEIARLKDETAQQNQTPRQPFQPKAKTDPKPRIDPPPLITAVA HPGAMSVPPKVPVIGRTFPHLATLRRSPISHEGSISSAAMSPSFSPSLSPLAARSPAVSP FGVNQGPSASMISTREPSLDQSPEHEMRI NT seq 8910 nt NT seq  +upstreamnt  +downstreamnt atggacgtcaggcttagtgaaggaacgatagaggatataaacaaagacacctgtattgcc aatgcgttactccaggtcgtgaacctgcgtcggatcgatgggcccactacccgctatcgt ctcatgatgagtgacggccggcactccttctcctccttcatgctggcctcccagttgaac cgtttggttgacgagggccatctggagatccactgtgtgtgcaatgtgaagaagacggcc acgaatacaatcaaagatgggagacaagtggtgataatcctagaaatggacgtggtgaaa tcagcgaaggacatcggggggaagataggatcgcccactccttacctgggcggccagacc agctctccccagaaggctgcccagatcttatcttctcctgctcgggcccttgcccctcct tctccagcacctccacagagcccccctactgcctcctcttcgagggggggctacggcaga ggctacggcagggggaagaagacggcgtcggtgggtcccttgtctccagggccgtcccca accaaaccggccaaaatggtccccatcgccagcctcaacccgtaccagtccaagtggacc atcagagcccgcgtcaccaacaagagttccatccgcacctggaacaactcccggggagag ggcaagctcttctccttcgagatcgtcgacgagagcggggagatccggatcacagccttc aacaaggaggtggacaagttcttctcactggtagaggcagggaaggtgtactacatctcc cgggcgacgctgaaggtggccaacaaacagttcaaccccttgaagaacgactacgagatg tccctccacgccgactcctccatcctgccctgcgacgacagccgggaggttcccatcgtg cagtgccactttgtgcccatcgcggagctggagaaccgagacaaggacgccatcctcgcc tcctcccctcagggtggactgagtgcggtggctcgtgtcagggtctccgtggtggacatc aacgacaaccgcccctccttctaccccgtcacctacaccgtcagcctcagcgcgcacagt cccccgggcacctccgtcgtcaaggtgaccgccaacgaccccgatgccggcgacaacggc aaagtgacctatcgcgccctgcccggcggaggctccgccttcttcaccctcaacaaggac acaggcgtgatctctctctcccgctcgctgcacggcaaggccaacacggtgatctccatg gtgatctcggcgcaggacgggggcggcctgacggcgccggccaacgccagggtgaacgtg agcgtggtggcgggctcggtggcgccccctgtgttcgagcaggcgcagtacttcttcacc gtgtccgaggacgtgttgagggggaccgaggtcggggtggtccgcgccagcaagacagga gggcccaaggacgtctcctactccatctcctccggcgaccccgacggcttcttcaccgtg gacccctcctccggcgccctccgcaccgccctccccctggaccacgaggctttagccagc ctggacctggaggtgcaggcccgcagcggctccccgcccgccttcggcaccgcccgcgtg cgcgtcgccgtctccgacgtcaacgacaacgccccctccttcctgccctcctcgtccgag tccctcctcctcccggaggtcaccaagatgggcaccgtcatctaccgcgtgcaggccgcc gaccgcgactcgggccccaacggccagctgagcttcgacctggcgtccgcgggagcggcg ggctccggcggaggcgggcagaggacgttcggggtggaccgcggcagcggcgagctgcgt ctgatcgggacgctttcctacgagagcgccccgcgctacgacctccaggtggtggcgaag gacggaggggcgccccagctgagctccaccttcaccctggtggtgcacgtccaggcgcag gacgcccagggccccgccttcgacacgctcacctaccgggtggagctccgcgagaacacg gcgctcagcacccgcttcctccaggtgcgggcgctgaaccgggaggccggcggcgggaac ggcaacggcgggagctcgtccgcgtcctcgcccgtcacgtatcgcctgcggccggacggc gacgcagccgggttcggcgtggcgccggacagcggttggctgtttgtacgcagctcgctc gaccgcgaggccaaggacatgtacctgctgacggtgctggccacgtcggggaggggcgcg gccgggcggacgggcagcgccaccgtgagggtgacggtgacggacgagaatgacaacgcg ccgaagctgagccaagaccgggtgttcctggcggtgcgggagaaccttccggcggggatg ggcttcgggagggtgtcggcgacggatcgcgacgcgggtcagaacgcccgcctctcctac agactactgcacacagacaggcacttccagatcaactcccagacaggtgagatcagtacc cgggtgaacctggacagggagcagcagtccagctaccagctggtcatcgtggtccaggac ggaggcacgccccctcgcagcgccacgggcaccgcccacatcaccgtcctggacgagaac gacaacgcccccagcttcagccacggccaccctgacaaggagctgctgctgcaggtgatg gaaggcctctcctcaggctccgtgctggggacggtgacagcgaaggacccggacgagggc gagaacggcaccgtctactactccctgtcaggttccagagcagagcgtttctccctcaac ccctccacgggggagctccgctcctcctcccccctcaggaggctggagcgggcggagtac accttcaccgtgaccgcctccgaccatggagcacccggcctgagctccacctgtctccac cttctccaggtcctcggcacctccaagtccgcccccaagcccaacaccctctccatgacc ctcagcaccgtggagggctccgcccccggctccgtcattggctccgtccgctcccgcgac cagcgagagcccgtcccgtcggagggccaggtcacctacctggtggtgggcgggaccgac cgcgagggcaccttcatggtggaacgctcgtccggagacgtgtacctggtgagggagctg gactacgaggagggctcccgctacacgctgcacgtggaggtgtccgacttctcgcgggac ttccccgccagccaccgcgtgcagctggacatctacgtgcaggacagcaacgaccacgcc ccccagttcaccgaggatcccgtcaccgtggtgatcccggagaacgcagagcccggctcc tccgtctacaccttccaggcctccgacaaggatgggagcgggcctaacagcgaggtgcat tactccatcgaacaccgctggcccgaaacccccgacctcctgaccctcgacccctccacg ggcgtcctgaccctgggccagagcctggaccgcgagaccacgccctccctctacctggtg gtgcgggcgacggactcggcgacggacccggcgcagcggcgctggggctcggtgacggcg aggctgtttgtgacggacgtcaacgacaacgcgcctctcttcagctcgccctccgccgtc agcgtcatggaggaccagcccgtggggtttgtggtggtgtacgtgatggcccgagacgag gacgagggagagaacgggcgcgtgtcgtaccgcatccaatcagggaacagcgccggacgc ttccatctcaaccccaacaccggttctctctccatcctcaaacctctggaccgggaggag caggaagtcttcaacctgacggtggtggcggaggaccacggcgtcccgcagctctcctcc tcccaggtggtgtgcgtgcaggtgatcgacgtgaacgacgagccgccgctcttccagcgg gccgagttcgaggcgcaggtgacggagaaccagggagcgggaacggtcgtcctcgccgtc accgccaccgaccgtgaccagggctctaatggtcaggtgacctacggaggactgacagag gaaggattcaccatagaccccagcacaggtgtcatcactatcaccaagaccctggacaga gagatgcaggaacactacacactcacagtctacgccaaggacggcggcctgcctcctaac tttgccaaggcggtggtgcgcgtgtcggtgcaggacgagaacgacaacgccccggcgttc ggccggccctggtacaccctggaggtcccggagaaccagcccgccgtggagctctgcacc ctcagggccagcgaccccgacacaggggccaatggcgacctggagtataggatcaccgcc ggagaccccaacggggacttccgcctccacgccagctcgggggccctgtccacgtcccga cccctggaccgcgagaggaaggccgggtacaccctggtggtgacgtccctggaccggggc agcccccccctgagcggcacggccacggtggaggtcaccgtcctggacgtgaacgacaac agcccggcgttcgccgccggcagcttcagcgtggacgtgtctgaggacgccgccgagggc tccctggtcctggaggtgacggccacggacgcggacgagggcctgaacgggcgggtgctg tacttcctgagccgcgaggccaggggggcgttcgccgtggacgagaagagcggccgcgtc gccacgacgacgccgctggaccgggagaagagggcctcgtacagcttccaggtgttcgct gtggacctctcccctgcggcgccgcgcaacacctccgctcaggtgacggtcaccatccag gatgtcaacgacaacgcccctttcttcatccaggaccccttggtggtggaggtctcgggc ctccagtcccagcgcgtcgtggccaccatgagagccgaggacaaggacttcggcgccaac ggctccgtgttctaccgcttcgccgcgccggcgaggggcttcagcatcaactccctgacg ggggagatccaggccacggagcctccgggcgggctgacccaggtccagaggaccctgctg gtggaggccatggaccagggcagcccggcccagtcctccctgggggtggtggtggtctac gtgagggagcagcagtatcaggggatccgcttctcgcgcaacgccagggatgtcagcatc caggagaacgccgagcaaggcacagcagtagcgcaggcccaggcccagtaccccgacggc acccgcagcggcatcagctacagcctcttcagcggcaaccgggagcacgccttcaggatc agctcggccacgggggagatctgggttcagagccccaaggggctggactttgaggacacg ccccgactacgcctagtggtgaaggctgagacggcctcctccacgtcctacatggcggtc aacctgatcctgcaggacgtcaacgacaacctgcctcgcttccagctgcagaactacgtg gcctacatgagggaggcccagggatacgagatgcctatcatacaggttgtggctgaggat gtggaccaggggcagaacggtcaggtgacctactccatccaacagtcaggcggcatgagc ggcctgttcaagatcgaccccgtgacgggaagcatcaccacggcggccatcatggaccgc gagatctggacccaggccaggctggtcatcacggcgacagacaaaggcagcccccgattg gctggctcggccactctgacggtgattattgtcgaccagaacgacaacagtcccaccatc cccctcccccgggagattcgcatcccagagaacaccgtcatcggcacggagatcaccttg gtgacgggcaacgacgtggactccagccccgccctggcgtactccctgcagctggacccc ttgtcgctgggccgcttcggcatccaccgctacagcggcggcgtgtcgctgacgggcgcc ctggacttcgaggagaggacctggtacacgctgaccgtgagggccacggactcccagcac cagacggaggccaacatcaccatcctggtggaggacatcaacgacaacgcgcccaccttc actcaagacctctaccagataacgctgcctgaacacagcccaccaggaagcgtagttgtc acggtaacggcaacggacagcgactcgggggagaacggaaaggtcacctatcgcgtgatg tcatcgacgcaggagggattctacatcgaccccagcaatgggaccctgttcatcaaccag agggcagagttcgaccccgagaaagcgtccgtcagcgtggtcatcgaggctcgcgatggg ggctcccccactctctcctccctcaccaccgtccaggttcacctctccgacgtcaacgac cacgcccctgtctttcaccaatcagagtacagggccaccgtgtctgaggatactatcgcc ggggcgaccatcttgaccctggaggcattcgacgccgacctctctagggagaactgtggc tttgacttcgccatcgccagcggcaacggcggcaacgccttccagatcgaaagcagcgtg cgcttcctggagggccgcggcttccagaccgtggggaccctcgtattggccgaggggctg gactttgaagccacgcccgtttacaacctcactgtcgtggtgtcggaccgcggcgtcccc cagcggagttccagcgtcgccgcggtcatcgccgtcggcgacgtcaacgacaacccgccg gcgttcagccgggcggagtacagcgtgtccctgagcgagggagcagcggccgggaccgag atcctacgactcacagccacagaccctgactcggcccccaacgccgaggtccagtactcc atcagctccggggacgagctgcacctgttcaccgtggaccagtggagcggagcgctccgc cttcagagggccctcgaccgcgagcaccggccctctcatgtggtcatcatccaggcctcg gacgggcagggccacttcgccctggccccggttgccgtggaggtgaaggacgtgaacgac aaccggcccttcttccccgtggagatcctgacggccagcatcaaggagaaccagccggtg aacacggccgtgacggtcctccacgccatcgaccacgacaccggggtgttcggccagctg aggtactccctgctggagcgctctgggccggggaaggaggccttcgccgtggaccgcaac tccggcgaggtccgagccagggcgagctttgacttcgagaaggtcaactcctttaacttt gtggcgctggcgacggacgccggcaaccactcggcgacggtgacggtgcaggtgtacgtg acgggcgaggacgagtacgacccgctcttcgcctcacccgagttctcgttcgaggtgccc gagggggcgaagaagggccagagcatcgggcgggtgcaggcgagcgacgaggacggcggc gtggacggcatcatcctctactccctcgccggcccctccccttacttcgacgtcaacaaa accacaggggacgtcctcctcaaggtggacggctcgggcggcggcagcgccggagggtcg ggcagggccaagcgagaggccagggtcatgaccctggacgtgtcggcccacagccccctg gagacgtcgcgggtcgccaaagcccagctgaccatcgacgtgaccaacacgggcttcggc ctggcgcccgatgtcaacgtcctgctggtcagcatcatcgccgtgtcgctgggggtgatc gtgctgctggtggtcatggccatcgtggtgttcctggtcaagtcccgccggcggaagaag agccaggaggcggggaaccggaccgtgtccggtacccccctccagaaactggaccagtcc aaacccggcgcgggggggagcgagcgcatctaccaccaggcgttgccgggctacgtggcc gaccagggcggggcggggggcgggccgtacacccgcggcggctccctggacccgtcgcac tccagcgggcggggctcggccgaggcggcggaggacgacgagatccgcatgatcaacgag tacccccgcgtggcctccatcacctcgtccatgcaggagcacatctcggcccgcgggccc gactccggcatccagcaggacgccgaccagctgtccgacatctcctgcgagccggccgcc ctcgagggcagcgcctggttcaaggggaagaagctcggcagcagcgtgagcgggaccctg ctctccggccagctccccgtctaccgggacgagggcggcggctacctaggcgtgggccga ggcctcaacatctcccacccgaaggactacgccttccccgaggacggcaagccccacgtg gacggctcactcacggccatcgtggccagcgacgaggagctgaggggcagctacaactgg gactacctcctcaactggtgcccgcagttccagccgctggccaacgtgttcaccgagatc gcccgtctcaaggacgagacggcgcagcagaaccagaccccccggcagcccttccagccc aaggccaagacggaccccaagccccgcatcgacccgccgcccctcatcacggccgtggcc cacccgggcgccatgtccgtgccccccaaggtgcccgtcatcggacggacgttcccccac ctggccacgctgcggaggtcccccatcagccacgagggctccatctcgtccgcggccatg tccccaagcttctccccctccctgtcgccgctggccgctcgctccccggccgtgtcgccc ttcggggtcaaccagggcccgtcggcgtccatgatcagcacccgggagccgtccttggac cagagtccggagcacgagatgaggatctga

DBGET integrated database retrieval system