Osmerus eperlanus (European smelt): 134013660
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Entry
134013660 CDS
T10927
Symbol
synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep00562
Inositol phosphate metabolism
oep01100
Metabolic pathways
oep04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
134013660 (synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
134013660 (synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134013660 (synj1)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
134013660 (synj1)
Membrane trafficking [BR:
oep04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
134013660 (synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
134013660
NCBI-ProteinID:
XP_062309249
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All DBs
Position
27:3673526..3702337
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AA seq
1711 aa
AA seq
DB search
MAFSKGYRIYHKLDPPPYSVIVESRNKEECLMFESGAVAVLSAAEKEAIKSTYTKMVDAY
GILGVLRLNLGDSMLHSLVVATGCSSVGKVQESEVFRVTSTDFISLKNDPGDEDRIADVR
KILNSGNFYFAWSHTGLSMDLSLNAHRRIKEDTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAGHKQAKACVISRLSSERAGTRFNVRGANDDGQVANFVETEQVIFLD
DKVSSFIQIRGSIPLFWEQPGIQVGSHRVKLSRGFEANAPAFERHFSALRRLYGKQVNIN
LLGSKEGEHMLSKAFQSHLKASEHAGAVRMVNFDYHQMVKGGKADKLHSVLKPQLSRFLE
DCGFFYYSAETGVTRSQSGTIRTNCLDCLDRTNSVQAFFALEMLPKQLEEMGLTEKPQLV
ARFQEVFRVMWSQNGDYVSKIYAGTGALDGKAKGGKLKDGARSVTRTIQNNFFDSSKQEA
IDILRLGSTLNSDLADKARALLTTSSLYVTEPILQSASPRVLLGMCQNHHKYTRPRRVRV
GVGTWNVNGGKQFRSIAFRNQTLNDWLLDAPLKAGYPDFQDSKANPIDIFAIGFEEMVEL
NAGNIVSASTTNQKLWAAELQKSISRDHKYVLLASEQLVGVCLFIFIRPQHAPFIRDVAV
DTVKTGMGGATGNKGGVAIRMLFHTTSICVICSHFAAGQSQVKERNDDYNEITRRLAFPM
GRLLYSHDYVFWCGDFNYRISLPNEEVKELIRQQNWESLTTGDQLVDQKNAGLVFKGFIE
GKLDFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWKRRKWNFDKTAEEMDGASESEGDPQ
VPWTPGSLKYYGRAELKTSDHRPVMAIIDVDVLEVDPEERHQVYREVIAQQGPPDGTVLV
ALCSSGPDDYFDDALIDELLDKFTVFGEVILIRFVEEKMWVTFLEGYSALAALSLSASTV
LGHMIDVRLKSPGWIKSLEDEMSVERICGTIPTSASSSLLAEDADMADDDYDMEGDVDEE
VEEILPQHLQPGAGSSGAGSSPVPSPRGSPCHSPTHGEPSAPSRPSRAPPRTAGPPQGCP
AEYQPGGPPSQGTEPRRPPPPRPNAPPARPAPPQRPPPPSGSKSPAMARPDAAGRGPPGV
GGVPRPNIPPRAGVISVPPQGRALPPSHPGAPRPTPEVHPGAPRTIPDTHPGAPRPGPDA
PAKPVDLPLGPPPTAAPPVRPQATASPMQNPMVPQATASPMQNPMVPQATASPMQNPMVP
QATASPMQNPMVPQATASPMQNPMVPQAIASPMQTPMVPQAAPSLQHQLPPRMQPSMQAP
MLPQMAPGPPQAGSATAVPLPQGLASPKPPPRSRSSHGLPPEGAAPTAAPPAQTNGMNGI
QREAQWKPAPFDTPDLLSASSWLNTQSLTRGTSLRAPPSVPGPSSSSGTLPSSFSLDSAP
LSALLGPASHSSSSSSASSLSAPSPLAPSLLPPPPVPSRSRSQEALLRVSPNPFLTEPVP
ARPNSTNPFTGPQAQQSQRRSLTPDFQARASGPGLQRTMSAFTQPLIPSPAPALLPTLTP
TPAPVPPRPLSRTMSLFVQSSTLLPPASAPLLFIPAPALPAVAPSTIPAAHPQPPPPGKR
HQWVTFDEESHFPSQTKAPPAAAPIFPSGSSLPQTQTLFPCSGFDSDPGWGGSSAVPSLP
PPVPARTAPGHPQVPARPSDGLLFPKELTER
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagcaaaggatatcgcatttaccacaagctggacccccctccctacagcgtg
atagtggagagcagaaacaaggaggaatgcctcatgttcgagtctggcgccgtggccgtt
ctgtcggctgccgagaaggaggccatcaaaagcacatacaccaagatggtggacgcctac
gggatcctgggagtcctccggctgaatctcggtgactccatgctccacagtctggtggtg
gccacaggctgtagctcggtggggaaggtccaggagtccgaggtgttccgggtcacctcc
acggacttcatctccctgaagaacgacccgggggacgaggacaggatcgcggacgtgagg
aagatcttgaactcgggcaacttctactttgcctggtcgcacactggactcagcatggac
ctgagcctgaacgcccaccgccggatcaaagaggacaccacagacaaccgcttcttctgg
aaccagtcgctgcacctgcacctgaaacactacggggtgaactgcgacgactggctcctg
cgcctgatgtgcggcggcgtggagatccgcaccatctacgcgggccacaagcaggccaag
gcctgcgtcatctcccgcctcagctccgagagggcggggacgcgcttcaacgtccgggga
gccaacgacgacgggcaggtggccaacttcgtggagacggagcaggtcattttcctcgac
gacaaagtgtcatctttcatccaaatccgcgggtccattcctctgttttgggaacaaccg
ggaatccaggttggctcccaccgtgtcaagctctcccgtgggtttgaggccaacgcacca
gctttcgagaggcacttcagtgctctgcggaggctgtatggtaaacaggtgaacatcaat
ctgctggggtcgaaggagggagaacacatgctcagcaaggcattccagagtcacctgaag
gcgtcggagcacgcgggcgccgtgaggatggtgaacttcgactaccaccagatggtgaag
gggggcaaggccgacaagctgcacagcgtcctcaagccccagctcagccgcttcctggag
gactgcggcttcttctactactctgcggagaccggcgtcaccaggtctcagagcgggacc
atcagaaccaattgtctggactgtctcgacagaaccaacagcgtccaggccttctttgcc
ctggagatgctgcctaagcagctggaggagatgggtctcacggagaagccccagctggtg
gccaggttccaggaggtgttccgggtcatgtggtcccagaacggcgactatgtcagcaag
atctacgccggcacgggagccctggacggcaaagccaagggggggaagctgaaagacggc
gctcgctcggtgaccagaaccatccagaacaacttcttcgacagctccaagcaggaggcc
atcgacatcctcaggctgggctccacgctgaactctgacctggccgacaaggcccgcgcc
ctgctcaccacatccagcctctacgtcactgagcccatcttacaatcagcctctccccgg
gtcttactgggcatgtgtcagaaccaccacaagtacacgcgcccccgccgggtcagggtg
ggcgtgggcacgtggaacgtcaacgggggcaagcagttccgcagcatcgccttccgcaac
cagaccctcaacgactggctgctggacgccccgctgaaggcgggctacccagacttccag
gacagcaaggcgaaccccatcgacatctttgccatcggcttcgaggagatggtggagctc
aacgctggcaacatcgtcagtgccagcaccaccaatcagaagctgtgggcagcagagctg
cagaagagcatctcgcgggaccacaaatacgtcctgctggcctctgagcagctggtgggc
gtgtgcctgttcatcttcatccgcccccaacacgccccctttatcagggacgtcgccgtg
gacaccgtgaagacgggcatgggcggggccactgggaacaaagggggcgtggccatccgc
atgctgttccacacgaccagcatctgcgtcatctgctcccacttcgccgccggccaatca
caggtcaaggagaggaacgacgactacaacgagatcacgcgccgactcgcgttccccatg
ggccgcctgctgtactcccacgactacgtgttctggtgcggcgacttcaactaccgcatc
agcctgcccaacgaggaggtcaaggagctgatcaggcagcagaactgggagtccctgacc
acgggggaccagctggtggaccagaagaacgctggcctggtgtttaaaggcttcatcgag
gggaagctggacttcgcccccacctacaagtacgacctgttctcggaggactacgacacc
agcgagaagtgccgcacgccggcctggaccgaccgcgtcctctggaagaggaggaagtgg
aactttgacaaaaccgccgaggagatggacggcgcctccgagagcgaaggggaccctcag
gtcccctggaccccggggagcctcaaatactatggcagggcggagctgaagacctccgac
cacaggccggtgatggcgatcatcgacgtggacgtgctggaggtggacccggaggagcgt
caccaggtgtacagggaggtgatcgcccagcaggggcccccggacggcaccgtcctggtg
gccctgtgcagctccggccccgacgactacttcgacgacgccctcatcgacgagctgctg
gacaagttcaccgtcttcggggaggtcatcctcatcaggttcgtggaggagaagatgtgg
gtgacgttcctggagggctactccgccctggccgctctgtctctcagcgcctccacggtc
ctgggccacatgatcgacgtgcgtctgaagagccccggctggatcaagagcctggaggac
gagatgagcgtggagcggatctgcggcaccatccccacctcggccagctcctccctgctg
gccgaggacgcggacatggcggacgacgactacgacatggagggtgacgtggacgaggaa
gtggaggagatccttccccagcacctgcagcctggggcgggctcctccggggcgggctcc
tcccccgtcccttccccccggggcagcccctgccactcccccacccacggggaaccctca
gcccccagccggcccagcagggcccccccacgcactgccgggcccccacaggggtgtcca
gccgagtaccagccgggcggtcccccatcccagggaacggagcccaggcgcccccctccc
ccccggcccaacgcccccccggccagaccggcccccccgcagcgccccccgcccccctca
ggatcaaaaagccctgcgatggctaggccagacgctgccggtcgaggcccaccaggagtc
gggggcgttcccagaccaaacattccaccgcgggccggcgtgatcagcgtgcccccccag
ggccgtgccctgcccccctcccaccctggagctcccaggcccaccccagaggtgcacccc
ggggccccccggaccatcccggacacccaccctggggccccaagacccggccccgacgcc
cccgccaaacctgtcgacctgcctctgggccccccgcccaccgcggcccctccagtgagg
ccccaggccactgcctctcccatgcagaaccccatggtgccccaggccactgcctctccc
atgcagaaccccatggtgccccaggccactgcctctcccatgcagaaccccatggtgccc
caggccactgcctctcccatgcagaaccccatggtgccccaggccactgcctctcccatg
cagaaccccatggtgccccaggccattgcctctcccatgcagacacccatggtgccccag
gctgcccccagcctccagcaccagctccccccgcgcatgcagcccagcatgcaagcccct
atgctgccccagatggccccgggccccccccaggcggggtcagccactgccgtgcccctc
ccccagggcctggcctcccccaagcccccgccgcgctcccgttcttcccacggcctgcca
ccagagggcgcggcccccacagcggcccccccagcccagaccaatgggatgaacggaatc
caaagagaagcacaatggaagcccgcccctttcgacacgcctgacctgctctccgcctcc
tcctggctcaacacccagtccctcacccgaggcacctccctgcgggcgcctccctccgtg
cctggcccctcctcctcctccgggaccctcccctcctccttctccctggactcggcccct
ctctccgccctgctcgggcccgcctcccactcctcctcgtcctcctccgcctcctccctc
tccgccccctcccccctggcgccgtccctcctcccccctcccccggtcccgtcccggagc
cggtcgcaggaggccctgctgcgcgtctcccccaaccccttcctgacggagcccgtcccg
gcccggcccaacagcaccaaccccttcacgggccctcaggcccagcagagccagcggcgc
tccctcacccccgacttccaggcgcgggcctccgggccgggcctccagaggaccatgtct
gccttcacccagcccctcatccccagccctgccccggccttgctccctaccctgaccccc
accccggccccggttcctcctcgccctctcagcagaaccatgtccctcttcgtgcagtcg
tccaccctccttccccctgcctcggcgcctcttctcttcatcccggcccccgccctgcca
gccgtggccccttccaccatccccgccgcccacccccagcctcccccgcccgggaaacgc
caccagtgggtcaccttcgacgaggaatcccacttcccctcccagaccaaagctccgccg
gccgcggcccccatcttcccctccggctcctcgctcccccagacccagactctgttcccc
tgctcgggcttcgactccgaccccggctggggcggctcctccgccgtcccctccctccct
ccccccgtcccagccaggactgcccccggccacccccaagtcccggcccggcccagcgac
ggcctcctcttccccaaggagctcaccgagagatag
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