Osmerus eperlanus (European smelt): 134013676
Help
Entry
134013676 CDS
T10927
Symbol
arap1a
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
134013676 (arap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134013676 (arap1a)
Membrane trafficking [BR:
oep04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
134013676 (arap1a)
Endosome - Golgi transport
Arf GTPase associated proteins
134013676 (arap1a)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
134013676 (arap1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH
RhoGAP
ArfGap
PH_6
PH_11
RA
PH_3
PH_8
RA_2
Ras_bdg_2
DUF7589
RBD
PH_10
Motif
Other DBs
NCBI-GeneID:
134013676
NCBI-ProteinID:
XP_062309283
LinkDB
All DBs
Position
27:4071362..4090515
Genome browser
AA seq
1121 aa
AA seq
DB search
MERKDDQLRALQRCFKSIEEPVNMNNSEDADSDLYTNRNRSRSSFDEGSIYISCTRPHSL
EDPGKPYSSHSPVIKTGWLDKTPPKGTLIFQKRWVTLDAEFLRYYQNEKEVFSKRFIAIS
TIAEVLSVGEQKFEVVTKNRTFLFRAENSAVRGEWVAVLKETIQQRSASDAGGDSYGEKQ
GYLEMNGYRSKLFIVVSADRVFLYMNSEERSQGIGITCIDMNMGSVKSSDTRAFSINTCY
KLFSFVAETTQQRDEWVEAMQACIGRSLSSDTVVWSVWVEESNRRCADCGDEDPDWASVN
LCVVICKRCAGVHQSLGPSVSKVRSLRMDEKVWTDSLIQVFLQLGNDRSNLFWASNVPPS
ETIRPSSNSEERQTFIKTKYCQRKYRQYHRLFGRQEDLNKALCKSVQTGDLLETMSLVFC
GADVNCPTGDPDVPNPLCIAQNYGRKLQEEFLFHNLNTEFPGVQDVERVIPQAAVSIPHA
GILFKIGSTTRAVTERKGKGDFSQRWCILDKGVLKYFDGEKRAHPCGEIKMSDVQCLVVN
PLGKHGYLHTFELYQISGRIHLFGADTPDSVQQWIETIAKAIVPPEAERMASWSFERVGR
LRYTEGPNPHSPRACWVAAGGSTLLVLFHASDRPESIDLRKLQELCVQPEPGPVVLVDRG
RTLRLEGDRRADFPGWVSSLQQGAGGGDGPLDQQQLTGTDVPVIVDRCLGFITQYGLKSE
GIYRKAGVQSKVTALLSSLCLDARRVQLTEGDHQVDDVANAVKRFLRNVREGVFGREQAS
LPWLQTVALSEKSQRISQYQALLASLPPVHRATLGAVINHLYCVQCFAEENKMDAHSLSI
VFGPTLFQADGTDKSAGQVVEDLVQHYQAVFDVDAELFKRQIDMISHIIRAKEDQPDEGP
LTPRTICGIYLEVKEEGSELLVQVSQTMTAMEVVSEVLRRRTISPQPEDYWSCFLVNDKE
DMERPLHYQEQVLPVYFSLDKDCHLLIKKNDYMKTILTCTDGWVNVTRNGHVQFCEEKGQ
RAKGSFSRRYCVVTATSLEIYKTQKSNHPEKECHLQALKVYCGIRKKLQPPSSWGMTVEW
TQDQHEMHRWYLCCESDHELTDWLATFLLLQHNGDLWPGTS
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcaaggacgaccagttgcgtgcacttcagaggtgttttaagagtattgaggag
cctgtaaatatgaacaactctgaagacgccgacagcgatctatacacaaacagaaacagg
agtaggtcatcttttgacgagggcagtatctacatttcctgtacccgtccacacagcctt
gaggaccctggaaagccgtattcttcccactcccctgtgattaagacgggttggctggac
aagaccccgcctaaggggactctgatctttcaaaagcgctgggtgacgctggatgccgag
ttcctgagatactatcaaaacgaaaaggaggtgttctcgaagcgattcatcgctatctca
accatcgccgaggtgctaagcgtcggagaacagaagtttgaggtggtgaccaagaacagg
actttcttgttccgtgccgagaacagtgccgtcaggggcgagtgggtggcagtccttaaa
gagaccatccagcagcgttctgcgagtgatgcgggaggggacagttacggggagaaacaa
ggatacctggaaatgaatggataccgctccaaactttttattgtcgtcagtgcagacagg
gtgttcctctacatgaactcagaggaacgcagccaagggattggcatcacgtgcatcgac
atgaacatgggcagcgtgaagagctcggacacccgcgccttcagcatcaacacctgctac
aagctgttcagttttgtggcagagacaacgcagcagagagatgagtgggtggaggccatg
caggcctgcatcggccgctctctgtccagtgacacggtggtgtggagcgtctgggtcgag
gagtccaaccggcgctgcgccgactgtggggacgaggacccagactgggcgtctgtcaat
ctctgcgtggtcatctgcaagcgctgcgcaggagtgcatcagagtcttgggccgagtgta
tctaaagtccgcagtctgaggatggatgagaaggtgtggactgacagccttattcaggtg
ttcttgcagctaggcaacgatcgctccaacctgttctgggcctcaaacgttccgccaagc
gaaactatccgtccttcgagtaacagtgaggaacgccaaacctttatcaagaccaagtac
tgccaaagaaaatacagacagtaccacaggttgtttggccgtcaggaagacctcaacaaa
gctctgtgcaagagtgttcaaacaggtgacttgctagagaccatgtcattggtcttctgc
ggggctgacgtgaactgccccaccggagacccagatgtgcccaaccctctgtgcatagcc
cagaactatggacggaaactgcaagaagagttcctctttcataacctcaatacagagttt
ccaggggtacaggacgtagagcgggtcattccgcaggctgctgtctcgatcccccacgct
gggattttgttcaagattggctccacgacgcgggcagtgacggagcgcaaaggaaaagga
gacttcagccaacggtggtgcattctggacaagggcgtcttgaaatacttcgacggcgag
aagcgtgcgcacccatgtggagagatcaagatgagtgatgtccagtgcctcgtggtcaac
cctttagggaaacatggctacttacatacctttgagctgtaccaaatctctggtcgaata
cacctgtttggagccgacacccctgattcagtgcagcagtggatcgaaaccatcgccaag
gccatagtgcccccagaggcggagcgcatggcgagctggtccttcgagagggtgggaagg
ctccgctacaccgaggggcccaacccacacagccctcgagcctgctgggtggcggcgggg
ggctcaacgctcctcgtcctgttccacgcctccgacaggccagagagcatcgacctgcgc
aaactacaggaactctgcgttcagccagagcccgggcctgtggtgctggtggatagaggc
aggactttgcgtctcgagggggaccggagggctgacttccccggctgggtgagcagcctc
cagcagggggccggggggggtgacggacccctggaccagcagcaactgaccggcacggat
gtccccgtcatcgtggaccgttgcctcggcttcatcacacagtacggcttgaaatcagaa
gggatctaccggaaggcgggcgtgcagtcgaaggtgacggccctgctgtcttctctgtgc
ctggacgcccggcgcgttcagctgacggagggggaccaccaggtcgatgacgtggccaac
gccgtgaaaaggttcctccggaatgtccgcgagggagtcttcggcagggaacaggcctcc
ctgccgtggctccaaaccgtggctctcagtgaaaagagtcaaaggatctctcaataccag
gccctgctcgccagcctccccccagtccaccgggccaccctgggggccgtcatcaaccac
ctctactgtgtccagtgctttgccgaggagaacaagatggacgcgcacagcctgtccatc
gtgttcggccccaccctcttccaggccgacggcaccgacaagagcgctggccaggtggtg
gaagacctcgtccagcactaccaggccgtctttgacgtcgacgcggagctcttcaaacgg
cagatcgacatgatttcccacatcatcagagccaaggaggaccaaccggatgagggacct
ctgaccccacgcaccatctgtgggatttacctggaagtgaaggaggagggatcagagctg
ctagtccaggtgtcccagacgatgaccgctatggaggtggtttctgaggttctgaggcgg
aggaccatatctccacagccggaagactactggagctgcttcctggtcaacgacaaggag
gacatggaacgccctttgcactatcaggagcaagtgctccctgtatatttttcacttgac
aaagactgccacctgttgatcaagaagaatgactacatgaaaaccattttaacatgcaca
gatggctgggtgaacgtcaccagaaacggccacgtacagttctgcgaggaaaagggccaa
cgggccaagggcagcttcagcagacgctactgtgtcgtcacggccacctctcttgagatt
tacaagacccaaaagagtaaccatccggaaaaggaatgtcacttgcaggctctgaaggtc
tactgtggcatcaggaagaagcttcagccgccctcaagctggggaatgaccgtagagtgg
acgcaagaccagcacgagatgcatagatggtatctgtgctgcgagtccgatcatgaactg
accgactggttggctacgtttcttctcctccagcacaatggtgacctgtggccaggaacc
tcctga
DBGET
integrated database retrieval system
