Osmerus eperlanus (European smelt): 134014085
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Entry
134014085 CDS
T10927
Symbol
rsf1b.1
Name
(RefSeq) remodeling and spacing factor 1
KO
K11657
remodeling and spacing factor 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
134014085 (rsf1b.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134014085 (rsf1b.1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
134014085 (rsf1b.1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
134014085
NCBI-ProteinID:
XP_062309943
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Position
27:2009997..2022824
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AA seq
1944 aa
AA seq
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MAASAAAAGSFPGLCPSYAVICSFLERYGPLLDLPELTFSQLERYFQDTSSVPKLLVDLH
VKLLRKIGKSVSADRWEKHLVKICQEFNTTWAWELDKKGYKDMTVECKMGILKYLCESQF
DDNVKFKTAINDEDPEKMRLQPIGRDKDGLMYWFQLDQDNNVRVYVEEQDDLDGSSWKCI
VRERNDLAEILALLKTQIDPSLLTKKEGDEGTQDENGGVKKLEASSEDEEDMVCKATSGV
VVTKTESQEEPSPNKEAHLVVSGPRSPSNDVKDDRTESTVPPEKPDGDENISTNRPAIKE
EPTEVVTDTNAKEPLSEKPSAPLQTEGGGEEVKKKKSADELQRAMKNDQQAKIPLKKREM
KLSEDFDNSNSGSSIIVRNPSLPQVKDPPKVDESGKDSAVKDTPVDQVNGNTQHPTEASF
NNNNGLKESPQKDRETQKNLANEKPAVAASGRESEVAEAKDKNLSKLTAVGDRAEDKQKD
GEEAMEVTTSSGSDAQNEAAATKADKKNPEALVQTKESIPNEAESAFAKPLPPSKDKVAH
PPGNSSDVKREERQNKCEETAAAKADVDEDEASVKTHTTSPPNTSREPEGKKETSVLTVP
GSSSKLEDPEKSEEKVPLKDSKPAEIKDVEKPTLVKGKPSDCERMEVVTKETKRPEPSTD
RPDGSKLSKTPVLIKEDQAPSYNKESRKTVGIKDTETSSVIQKTEILTQSKNTETLDSAK
ETSTSSVIKKADKPPLEKDTDSPNSSKEKGEHMILQKMGKAEGSKPIERSETPVVTKEKS
ERSTGTDSKGKEVTCISQDTNSEPKNIEKRTCLQLDEHKCAEKLAPSVAKTSIKDTEKMS
TNETAKTSTKDKEQKSTKDTENVSTKETEKTAKTSATDTAKESTKDRENISTKDTAKDST
KETEKTSKTSATDTAKKSTKDKEKISTKDTENISSKDTAKESTKETEKTAKTSAKDAAKE
STNDKEKISTKDTAKEPMKDKGKTSTNKPEKPSSPKKEKLEACKGGVELAERKTDVSKEA
MAVTTVDSRHVPPKTPSAEKESKKESAEISSKKSTDENTTMKKDSKKEPAKEDKSKTSSG
NEVAQEQTPMDCEEPLKGQGTKKEEAENTPSLTTTEGEKDKNQDSKAREDAEAKGCPETE
IGEKNDEKPSAEAEISSETKPDVASTEDKPDGKTENEDKDEEKDPEVKEKAAEGDKGSSE
VQEEGIRLKIKIPAHRRKADLLREERGDSESDTGEGRSLRRSPRICRPTPKVVEFQDRKL
ERKQAAPRVEKGEEKEEEEEEDKEKREEEVDEEEKTLQKKTREKKLDEDGQPKTKGRKRR
RTRWSNTRTRRKKKGSDEEGSDDGDYESSDEEDSEDDSDEDYKVERNRKRRNWYRQRRSS
DESTSSDDDLPPNDDPCKHCGLPNQPELILLCDSCDNGYHTACLRPPLMIIPDGEWFCPP
CQHKQLCDRLEEQLLNLDTALKKRERAERRKERLVYVGISVENIITPSVEVEEEKEEEVI
KVKKEVKKSKNWGRRSTRAKKSISYRFDEFDEAIEEAIEEDIKEAEGGGAGRGKDMANIT
GHRGKDMSTILQGEGGKENGRPPRPSAGQRRKKRRRLNDLDSDSTMEEEESEDEFRLSDS
TEEEEFVVSENDAESDVNSNSDGGSNGSGPRHRSSRTRKPVKRRKGARQPPPRRRRRPRG
YSDDEEEEETDEEEEEEMATEGSSEFSDSDLDMSRRRSRRSRKKQVNYCETSESEGSRAG
ANRNKVTSRRRLASSDSEASLSKGSDNERRVSRRADSSEEGSRQRRRRLSLKRRRASEDD
DDDSDESEEEERPVRKRVNRIDSDDDSDAAEEDKKQAPEQEEEEGLGKGATPLEYNLVEL
PPTNGQSPVKGLEGLMNQPGGGAAMSAPDLLAHLGPKNVNVATPVVAIAPNGLVSQEMVS
QEDDEDDLLGVTDLVDYVCNSEQL
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttcggcggcagcggcgggttctttccctgggttatgcccaagctacgccgta
atatgctctttcctagagcggtacggacccttgttggatttaccggagctcacattttct
cagttggagcggtatttccaggacacatcttcagttccgaagctcttggtggacctgcac
gtgaagttgctgaggaagatcggcaagtcagtgtcagcagaccgatgggaaaagcatctt
gtgaagatatgtcaggaattcaacactacttgggcttgggagctggataagaaaggctac
aaggacatgacggtagaatgcaagatgggaatcctcaaatatctttgcgagagccagttt
gatgacaatgtcaagttcaagacagcaatcaacgatgaggatccagaaaagatgcgactg
cagccgattggccgtgacaaggacggcctgatgtactggtttcagctggaccaggacaac
aacgtcagggtctacgtggaggagcaggatgaccttgacgggtcttcttggaagtgcatt
gtcagggagagaaatgacttggctgagattttagcgttgctgaagactcagattgaccct
tcgcttttgacgaagaaagagggagatgaaggcactcaagatgaaaatggcggcgtaaaa
aagcttgaggccagctctgaagatgaagaggacatggtgtgcaaggctacatctggtgtc
gtcgtgaccaaaacagagagccaagaagaaccgtcgccgaacaaagaagcccacttggtc
gtttcaggtcccagatcgccatcgaatgacgtcaaggacgaccgaacggaatccaccgtc
ccgccagagaaacccgacggggacgaaaacatctccacgaacagaccggcgatcaaagaa
gagcctacggaagtggtcacagacacaaacgcaaaggaacctctttcggagaagccgtct
gcgccattgcagacggaaggcggcggggaggaagtcaagaagaagaagagcgcggacgag
cttcagagggcgatgaagaacgaccagcaggccaagatccccctgaagaagagggagatg
aaactaagtgaggactttgacaacagcaacagcggcagcagcatcatcgttcgaaaccca
tcccttcctcaggtcaaagatcctccgaaagttgacgagtccggtaaagactcagcggtg
aaagacacaccggttgaccaggttaacggcaacacccagcatcccaccgaggcgagtttt
aataataataacgggttgaaagaatctcctcagaaggacagagagacgcagaaaaacttg
gccaatgagaagccagcagtggctgcatccggccgtgaaagtgaggtagctgaagccaaa
gataaaaacttgtccaaactgaccgcagtcggggaccgggcggaagacaaacagaaagac
ggcgaggaggccatggaagtgaccacgtcgagcggatcggacgcccaaaacgaggcagcg
gcgacaaaggcggacaagaaaaacccggaagctttggtccaaacgaaggaatcgatccct
aatgaggccgagtctgcgtttgcgaagcctttacctccatctaaagacaaagttgcacat
ccacctgggaactcatctgatgttaagagggaagaaagacaaaataaatgcgaagagacg
gcggctgcaaaggctgatgtcgacgaagacgaggcatctgtaaaaacacacacaacatcc
ccgcccaacacttcccgggaaccagagggaaagaaagaaacatctgtgttaactgtcccc
ggatcctcttcaaagctggaggaccccgaaaaatcagaggagaaagttcccttgaaggat
tccaaacccgccgaaatcaaagacgtggagaaacccactctcgtgaaagggaagccatcc
gactgcgaaagaatggaagttgtcactaaagaaaccaagagaccggagcccagtacagat
agaccagacggctctaagctctcaaagacgccagtgctcattaaggaggatcaggcacca
tcgtataacaaagaaagcagaaagactgttggtatcaaagacacagaaacgtcttcggtt
attcagaagacagagatcctgacacagagtaaaaacacagagactctcgacagcgctaaa
gagactagcacctcttcggtaattaaaaaggcagataaaccacctcttgagaaagatacg
gactccccgaatagcagtaaagagaaaggagaacacatgatcttacaaaagatgggaaaa
gcagagggatcgaaaccaatagagagaagtgagacgccagtcgtaaccaaggagaaatcg
gagcgttctacaggcactgactcaaaggggaaggaggtgacctgtatttcccaggataca
aactcggaacctaaaaatattgagaaacgaacatgccttcaactggatgaacataaatgt
gctgagaaattagctccctctgtcgctaagacttccataaaggatacagaaaagatgtcc
acaaatgagacggcaaaaacgtccacaaaagacaaagaacagaagtcaacaaaagacaca
gaaaatgtctccacaaaggagacagagaaaacggcaaaaacttctgcaacagacacagcg
aaagagtcgacaaaagacagagagaatatttcaacaaaagacacagcaaaagactccaca
aaggagacagagaaaacgtcaaaaacttctgcaacagacacagcgaagaagtcgacaaaa
gacaaagagaagatttccacaaaagacactgaaaatatttcctcaaaagacacagcaaag
gagtccacaaaggagacggagaaaacagcgaaaacatctgcaaaagacgcagcgaaagag
tccacaaacgacaaagagaagatttccacaaaagacacagcgaaggagcccatgaaagac
aaagggaagacttccacaaacaaacccgaaaaaccctccagccctaaaaaagaaaaactg
gaagcttgtaaaggcggagtggaactggcagagagaaaaaccgatgtatctaaagaggcg
atggcagtcacaactgtcgattcgcgccatgtacctcccaaaacaccgtctgcagagaag
gaaagcaagaaggagtcagcagaaataagttcgaaaaagtcaacagacgaaaacactaca
atgaagaaagactctaaaaaagaacctgcgaaggaagataaaagcaaaacgtcgtcggga
aacgaggttgcacaggagcaaactcccatggactgcgaggaaccgttaaaaggacaaggt
acaaaaaaggaagaagcagagaacacaccctccctcacgacgactgaaggtgagaaagac
aaaaaccaagactcaaaggcgagggaagacgccgaggcaaaggggtgtcctgaaaccgag
atcggtgagaagaacgacgagaaaccttcagctgaagccgaaatatcgagcgagacgaaa
ccggacgtggcgtcgacggaggacaaacccgacgggaagactgagaacgaggacaaggat
gaagaaaaggatcctgaggtgaaggaaaaagctgcagaaggggacaagggttcatccgag
gttcaggaggaagggatacgtctgaaaattaagatcccagcccatcggaggaaggcagac
ctcctgagggaagaaaggggagactctgagtctgacacgggagagggaaggtccctcagg
aggtcgcccaggatctgcagaccgactcccaaggtggtggagtttcaggatcggaagctg
gagaggaagcaggccgcgccccgtgtggaaaaaggtgaggagaaggaagaggaggaggag
gaagacaaagagaaacgggaggaggaggtggacgaggaggagaaaactcttcagaaaaaa
acgagggagaaaaagcttgatgaagatggccaacctaagaccaaggggcgaaagcggagg
aggacccggtggtccaacacccgaacgcggcgcaaaaagaaaggctccgacgaagagggc
tccgacgacggggactacgagtccagcgacgaggaagacagcgaggacgacagcgatgaa
gattacaaggttgagaggaaccgaaagaggaggaactggtacagacagaggcgcagttcc
gacgagtcgacctcttcggatgacgatcttcctcctaacgatgacccctgcaaacactgt
ggcctccccaatcaaccagagctgatcttactgtgtgattcttgtgacaatggctaccac
actgcctgcctcagaccccccctcatgatcatccctgacggagaatggttctgtccgccc
tgtcaacataaacagctctgtgataggctggaggagcagctgctgaaccttgataccgcg
ctgaagaagagagaacgagctgagcggaggaaagagcgtttggtgtacgttggaatcagt
gttgaaaatatcatcaccccttcagtggaggtagaggaggagaaggaggaagaggtaatc
aaggtaaagaaagaggtaaagaagagcaagaactggggtcgaagatcaacaagggcaaag
aaatcgataagctacaggtttgatgagtttgatgaggctattgaggaagcgatcgaggaa
gacatcaaggaggcagagggtggaggagccggacggggtaaagacatggctaacatcaca
ggccaccggggaaaggacatgtccaccatcctgcaaggggaaggggggaaggagaacggc
cgcccgccgcggcccagcgccggccagcgcaggaagaagcggcgacgtctcaacgacctg
gacagcgacagcacaatggaggaggaggagagcgaggacgagttccgtctgagtgacagc
acggaggaggaagagtttgtggtttcggagaacgatgcggaaagcgacgtcaactccaac
agcgacggcgggagcaacggcagcggcccgcgtcacaggtcctcccgaaccaggaagccc
gtcaaacgcaggaagggcgctcggcaaccgccgccacggcgacgacgcaggccgcgaggt
tactcggacgacgaggaagaggaggagactgacgaggaggaggaggaagagatggcgacg
gaaggttccagcgagttcagcgacagcgacctagacatgagcaggcgacgttcccgccgg
agcaggaaaaagcaggtgaactactgcgagacgtcagagtcggaaggttccagggcgggc
gccaaccgcaacaaggtcacgtcccgacgccgcctggccagttccgacagcgaagcgagc
ctctccaagggctccgacaacgagaggagggtgagcaggagggccgactcgtcggaggaa
ggttctcgccagagacgcagacggctctcgctgaaacgccggcgagcctccgaggacgac
gacgacgactcggacgagtccgaggaagaggagcggccggtccgcaagcgggtgaaccgc
atcgattcggacgacgactcggacgccgcggaagaggacaagaaacaagcacctgagcag
gaagaggaggaggggcttgggaagggggcgacgccgctggaatacaacctggtggagtta
ccccccaccaacggacagagtcccgtgaagggtctggaggggctcatgaaccaaccgggg
gggggcgcggctatgagcgcgccggacctcttggctcacctggggcccaagaacgtcaac
gttgccacgcccgttgttgccatagcgcccaacggcctggtctcccaggagatggtgtcg
caggaagatgatgaggacgacctgttaggcgtcacagacctcgtggactatgtctgcaat
agcgaacagttgtaa
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integrated database retrieval system