Osmerus eperlanus (European smelt): 134014882
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Entry
134014882 CDS
T10927
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
oep Osmerus eperlanus (European smelt)
Brite
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
134014882 (snapc4)
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
134014882 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134014882
NCBI-ProteinID:
XP_062310045
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All DBs
Position
28:1977696..1988105
Genome browser
AA seq
1546 aa
AA seq
DB search
MFEHKQIDDSDDNDASGSALDAEDLEGERERVQREIEELERSLGTDAIILSDEEDGGIAP
EGSEEASEEELDLPQTAESCLQMNLVYQEVLREKMEELEKHLADNKQQQKELVAQMSGPG
PSDGCAKNSIPNYNPNNLFMGHFLRPYFKDKLTALGPPANPETKEKNSKENRGAGMAKVK
RWTGWQKALLVNSVVRDCMRLMIKPKLTKVEYLTEKISKTDSGAEKQNLRQQIDQLEKEI
EEIRAKKEEELTGSRLDEHDWEKIANIDFEGLQDAENIKLFWQNCLHPSINKNIWKDKEI
DKLRIVAHKNLCINWELIAEQLGTNRTGFMCLQAFQRYVSKTFKKGPWQPQDDQQLRDLT
EKMRVGNFIPYTQMSYFMEGRPASQVMYRWTMVLDPSLKKGHWTPDEDQLLLKAVSKYGA
GRWWKIKQDVPGRTDTQCRDRYLDCLREGVKKGPWSPEEMLLLKEMVKKHGEGKWAAISR
EIPNRLDSQCMTQWSKLKRHKSGLTKKQSRAMRKSVRKRIRKRLQKLEEEEEGSTSEEED
PTQIVYMDSDDETKGEKRKRGAVESETEEEVERLTYLIPPLEKWIPTWDPNARGSGTLNT
VFVELPSVNSSQEVPDTSGLNHGQPSSSVHPSQDPPTHQNVMVRSTILDRFGNYLESVVG
DNPAVLAKKDRHSLLAMLKVPFAEIKELMLWRGVCASRKRNSFRSGPVRTFHRPSSMTSN
TSLHHALLVAVTPWVGNLLLPAPLTKNRPWKLDVVRERAEALELTSTPVFKFFLQALRVD
TDGCKKIIQHRQNPQRMQLVPVQPVQNRQTTFQSTVANRLQQVRKIPGNSMTQQNSRQSA
APISSVFMGPSPVFITQPIVQGQRLPVQAHSLPVQGTRIPVRASPLPVPGVPMVRFVVAK
GQKPVPLNTTLPGPLTSPSPHILCLQSPPIPSSSSNFNPLTCSANTLSTPTILRVPLQTN
SFRSPPGRTIVAEISVSPKVSSPAVGKRARKPTEKVKALLEKGKRADGVSPRRKRTCKEA
APEPKALLKTDGKSPGFRKTCMQIAPKADPQTCSPTPWTITNEKPAPPPPLDINIVYSIA
GQRSLRPKQPDSQQTPSTNAITNDHSSYTMSTNPGTALTQSYSPNLNPQTTITNSTATTT
FSTNSGQAFALSTNPDPGLTPSTSLPAVCGLVQRVSQSSAVPVDSPQSPRCALNGSTQSQ
PGSGPTQSQPNPGPTSSVPMFFLQSNSTPWPHGLSPFSPLQQQFSPGPCRPYILHVQQPG
TPGPGPVFRHPSPGTIPFLRQLSPGSGPFPMQQGHPGSRPILRQNPTTLIRHVSPGPQLF
FRPVSPGMTVPLPTHTATPSLPSNVIIVDATEPSFKPEPLRFDPSLILTEEPAQVIEWLT
GKTGVVLPKLEVALPYLPPFSSNLASLSALLRHKKSLTTSALQLLPPEEQGASEEEKVAA
VREVIAERFGTNPAYLMLKARFLSCYTLPAFLATLNPVNVEADSRSNSPTLDNGEGEEQT
DYRLSKRAKVRDGSTRMQSSLLVTDGTGAPAAHYSGIPCNQSHLQS
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagcataaacagattgatgattcggacgacaatgacgcttcgggttctgctttg
gatgcagaggacctggagggtgagagggagagagttcaaagagagattgaggagttggag
cgctctctagggactgatgcaatcattctgtctgatgaggaggatggagggattgcacca
gaggggagtgaggaggccagtgaggaggagcttgatctgcctcagacggcggagtcctgc
ctgcagatgaacctggtctaccaggaagtcctgagggagaagatggaggagctggagaag
catctggctgacaacaagcaacagcagaaagagctagtggctcaaatgtcgggaccaggc
ccttcagacggctgtgccaagaactccatacctaactacaaccctaacaacctgttcatg
ggacatttcctcagaccctacttcaaggacaagctcacagccctgggacccccagccaac
ccagagactaaggagaagaacagcaaagagaacaggggggcggggatggcgaaagtaaaa
agatggacaggctggcagaaggcactcctggtcaactctgtggtcagggactgtatgagg
ctgatgattaaacccaaactgaccaaggtggaatatctgaccgagaagatttctaaaacg
gacagtggagccgagaagcagaacctgcgccagcagatcgaccagttagagaaggaaata
gaagagatcagggcgaagaaggaggaggagctgactggtagccgccttgatgaacacgac
tgggagaagatcgccaatattgatttcgaaggtctgcaggatgcggagaacatcaagctt
ttctggcaaaactgccttcacccctcaatcaacaagaacatctggaaggataaagagatc
gacaagcttaggatcgtagcgcacaaaaacctctgcatcaattgggagctgattgctgaa
cagctggggaccaacaggacaggcttcatgtgtctgcaggccttccagcgctacgtctcc
aagaccttcaaaaagggcccctggcaacctcaagacgaccagcaactcagagatctgacg
gagaagatgcgagttggaaacttcatcccctacacgcagatgtcgtacttcatggaaggg
agacccgcttcacaggtgatgtaccgctggaccatggttctagacccatccctcaaaaaa
gggcactggaccccagatgaagaccagctgctcctgaaagctgtgtccaagtatggcgcc
gggaggtggtggaagataaagcaagacgtcccaggcaggactgacacccaatgccgcgac
aggtacctggactgcttgagagagggtgtgaagaagggtccctggtctccagaggagatg
ttgttactgaaagaaatggtgaaaaaacatggagaagggaagtgggctgcgatctccagg
gagatcccaaacagactggactcccagtgtatgactcagtggagtaagttaaagcggcac
aaaagcgggttgacaaagaagcagtccagagcgatgaggaagagtgtgagaaaaaggatc
aggaagagactgcagaagctggaggaggaagaggagggatccacctcggaggaagaagat
ccgacacaaatcgtttacatggacagcgatgatgagaccaagggggaaaagcgaaaaagg
ggggctgtggagagcgagacggaggaggaagttgagagacttacttacttgatccccccc
ctcgaaaaatggattccaacatgggaccctaatgccaggggctctgggaccctaaatact
gtgtttgtagagctgccaagtgttaactcctctcaagaggttcctgacacatctggactt
aaccatggccagcctagcagctcagtacaccccagccaggacccccccacacaccagaat
gtaatggttcgctccaccatcctggatcgctttggaaactacttggaatctgtggtgggg
gacaaccctgcagtactggccaagaaggatcgccacagtctgctggccatgctcaaggtg
ccgttcgcagaaatcaaggagctgatgctctggagaggagtctgtgcctccaggaagagg
aacagcttccggtccggtccagtgagaacgttccacaggccgtccagcatgaccagcaac
accagtctgcaccacgccctcctggtggcggtcaccccctgggtgggcaacctgctgctg
cccgcgcccctcaccaagaacagaccctggaaactggacgtggttcgagagagagcagaa
gcgttggaactcaccagcaccccagtgttcaagttctttctgcaggcgctccgcgtcgac
accgacggctgcaagaagatcatccagcatcgccagaatccgcagaggatgcagctcgtt
cctgtccagcctgtgcaaaatcggcagacaacgtttcaaagcacggtggccaacaggcta
cagcaagtcagaaaaatacctgggaactcgatgacacagcagaatagtcgacaatctgca
gctccgatctcatcagtcttcatgggtccttcacctgtgttcatcacgcagcccatagta
cagggtcaacgacttcctgtacaagcccactcacttcctgtccaaggcaccagaattcct
gtccgggcatctcctcttcctgtccctggagttccaatggttagatttgtcgtggcgaag
ggtcagaaacccgtccccctcaacaccaccctaccaggccccctcacatccccctcccca
cacatcctctgcctccaatccccccctatcccgtcatccagttccaactttaacccccta
acctgcagtgctaacacattatccacccctaccattctgcgtgtccccctccaaacaaac
tccttccggtcacctccaggcaggaccatcgtagcagagatcagcgtgtctcccaaggtg
agcagtcccgctgtggggaaacgagctcgtaaaccgaccgaaaaggtcaaagctctcttg
gagaaaggcaaaagggccgatggagtgtcacccagacgcaagagaacctgcaaagaagct
gctcctgaacccaaagccctcctgaagactgatggaaagtcgcccggattcaggaaaacc
tgcatgcagatcgctcctaaagccgaccctcagacatgctctcccacgccctggaccatc
acaaatgaaaagccagctcctcctcctcccttggatataaacattgtctattccatagcc
ggccagcggtccctccgcccgaaacagccggatagccaacagacaccatccaccaacgct
ataaccaacgatcattcaagctatacaatgtccaccaatcctggtactgctctgacgcaa
tcttacagtccaaacctaaaccctcagacaaccatcacaaattccaccgcaactactaca
ttttccaccaattctggccaagcttttgcactctccaccaatcctgatccaggtctcaca
ccctccaccagtcttcctgcagtctgtggtctggtgcaaagggtgagccagtcatctgcc
gtgcccgtagactctccacaatctccaaggtgtgccctcaatggttccacccaatcacag
cctggctctggtcccacccaatcacaacctaatccaggacccaccagttctgttcctatg
ttttttctacaatcaaattctaccccatggccccatggtttatccccctttagtccgctg
caacaacagttttcacctggtccttgcagaccttacatcttacatgttcagcaaccaggg
accccaggaccagggcctgtgttcaggcatccctccccaggaacaatccccttcctcagg
cagttgtctccagggtctggccccttccctatgcagcagggccatcctggatccaggccg
atcctaagacagaaccccactactctcatcaggcatgtttccccaggaccacaacttttc
ttcaggccagtatctccaggaatgactgtccccctgcccacgcacacagccacgccaagc
ctgcccagcaatgtgatcatagtcgacgccacagagcccagtttcaaacccgagcccctc
cgcttcgacccctccttgatactaacggaggagccggcgcaggtgatcgaatggctgact
ggcaagacgggcgtggtgctgccgaagctggaggtggccttgccctacctgcctcccttc
tccagcaacctggcctccctgtctgctttgctcaggcacaagaagtccctgaccacctcc
gctttgcagctgctgcccccggaagagcagggcgccagcgaggaggagaaggtggccgcc
gtcagggaggtgatagcggaacgcttcgggacgaaccctgcgtacctcatgctcaaggct
cgcttcctgtcctgctacaccctgcccgcttttctcgccacgctcaacccggtcaacgtg
gaggctgattcgaggtcaaactctccaaccttggacaatggcgagggtgaagagcagacg
gattatagactaagtaaacgggcaaaagtcagagatggatctacaagaatgcagagttcc
ttgctggtaacagacggtactggcgcacctgccgctcactactctggcatcccctgcaac
cagagccacctccaatcctaa
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