Osmerus eperlanus (European smelt): 134014973
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Entry
134014973 CDS
T10927
Symbol
nipbla
Name
(RefSeq) LOW QUALITY PROTEIN: nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134014973 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134014973 (nipbla)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
134014973 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd3
Cnd1
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
134014973
NCBI-ProteinID:
XP_062310192
LinkDB
All DBs
Position
28:837690..865670
Genome browser
AA seq
2564 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRVAEEVTCLLACRDDN
LVTQLAHSLTQVSTEHIELKDNLGSDEPEGEGPVLLQTMLARNPGIFRETGILQQPMGQQ
YKVTQNSMHGSPAQSGAFQQASMSPNPSSRFGPPPSGSGGGGFMGQQTSPVPSPYTPQSP
AGYLQFPPSYTQHQQIQQVSVASPMVPGGMRNVHEGKSSSQLSSNHHASDDYMSIVQRLN
TEESDPSLRNASFPLRSPQSGCSPTGSEGTPKAGSRPPLILQSPPPYSSPREGAGDTPGD
KKQQKKKPSGGSSSGGGGALKDDKDMYDIVTSPSKDVTKLTLRLSRVKSSESDPAGEALS
GVDPGSDLEQGYPPQEQGYPPQVQGYPPQVQGYAPGLQAYPPGLQHTMGAKLQQAGSSEW
PGGALLSSSSPYDEAELDALAEIERIEREAANERERCSREVQDKDKPLKKRKQDSFPPSR
VRGARGAGGPGGPTGAPGSGGGAGGNAGKLTPQEGSAAGNGASRPALMVSIDLQQAGRAD
GQLDPCMVAPIPALEAQRWPEEPAEGPAAEGSDTAGVLRLKPGGRPEVIKNRMDRQDSRR
EPARHRHDGKPDARRPEAGKSSGRGDRERRDRRSPEERHRGDSPRVRQDGRGGGGWRGAG
GLAAAEPWRRTGNRPGYRPSGSSKQLDARPPEFPAHLLGGSTGALKNFQIPKVKRDQEGA
PGGPEEAWGQPRVKLERLGLVKDLAKGAKPVVVLQKLSIDELQRFITHSKSGGKNRLSGR
TGKGGLDQSVLKDLPPELLAEIESTMPLCERVKMNKRKRSSVKERPRYAEVSSEDEDSEA
NGELMRKRARREKDRGWEQEEGERRRSGSFQDGRRGSASRYRESSGEESPPPSMSELARK
QKQKEKQKKRKAYEPKLTHEELMDSSTFKRFSNSIDSILENLEDVDFSVMEDDDEIPQEL
LLGKHQLTELASESAKIKAMGITSRIPSEKLVKVLNILEKNIQDGSRLSTLMNPDNDGED
EERLWRDLIMERVTRSADACLTALNIMTSLHMAKAVYMEDVIERVLQYAKYHLQNTLYPQ
YDPVYRVDPHQGAXXASKAKRAKCSTHKQRVIIMLYNKVCDVVTNIAELLDIQLLTDTTI
LQVSSMGITPFFVENVVSELQLCXIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSL
RNFRLNSSDQDGEPMFIQMVTALVLQLIQCVVHLPCDRDSLEDEYDSKMDQDLLITNSYE
TAMRTAQNFLSVFLKKCGSKQGEEDYRPLFENFVQDXLSTVNKPEWPASELLLSLLGRLL
VHQFSNKQTEMALRVASLDYLGTVAARLRKDAVTSTMDQRXINRILKETAGSDETQQLQK
ALLDYMEENAENTPSLVFARKFYIAQWFRDTGTESEKALRSQNQRDDDSSDGPHHARDLE
TAGEIMQRAERRKKFLRNIIKTSPAHFATLRMSSDTVDYQDACLIVRYLASMRPFSQSFD
IYLTQILRVLGESAIAVRTKAMKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAA
VELLGRFVLSRPQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPTFSKVTEMCVR
MIRRVNDEEGIKKLVNETFQKLWFTPTPAHDKDSMTRKILNITDVVAACKDTGYDWFEQL
LQNLLKSEEDASYKPAKKACIQLVDNLVEHLLKYEEALSENQGVNSSRLVSCITSLYLFS
KIRAQLMVKHAMTMQPYLTTKCNSASDFMVICNVAKILELVVPLMEHPSETYLATIEEDL
MKLIIKYGMTVVQHCVSCLGAVVNKVTHNYKFVWACFNRFYGALNKLKVQHQEEPNSTTL
AANKPFLLRSLFTVGALARHFDFDLEEFKGPNKQQVMIKEKVLELLLYFTRHEDEEVQSK
AIIGLGFLVIMHPSQMFVPEVKNLYNSILADASSSVNLKIQVLKNLQTYLQEEDSRMQEA
DREWKKLSKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQ
GLIHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAI
AQSSRRSSIIRGFRVDETTAALCSHLFSMVRTNRQHRRAFLISLLNLFDDSAKTEVNMLL
FIADNLACFPFQSQEEPLFIMHHIDITLSVSGSNLLQSFKESLLKEPRHKEKKVKKARER
RRSGGSEGSGDQDATPISCSSPLSDQGDGEDAGRRPRKGRRQEVSSGSESDLEDLDVDDV
EKVMLLLPDNPTSLLDFANASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKA
VNRKPNIHFNPRQTMDFLSNNLANATLTHDTKRRVVRQYLDFKVLMEHLDPDEEEEEGEA
GASANIRIKAINALLGGPGPHPRHPPPAPDTEDDDSEGDERTPGSSRRVRRSGEPSDPGH
MSEAVDSMDVIALCCPKYKDRPQMARVLQRTPSGYSVQWLAGSYSGPWAEAKKRDGRKQV
PWVDTIKDSDIICKKIALTSNHKLSNKVVQRLRSLYAARDSALS
NT seq
7695 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggatatgcctcatgttcccatcaccactctcgctgggatcgctagcctcacc
gacctattgaaccagctgcctctgccctcccctctgccggccaccactactaagagtctg
ctctataacggtcgtgtggccgaggaggtgacctgcctgctggcctgcagggatgacaac
ctggtcacccagctggctcacagcctcacccaggtctccaccgagcacatagagctgaag
gataacctgggcagtgatgagccagagggggagggcccagtcctgctgcagaccatgctg
gccaggaaccctgggatcttcagagagacagggatcctgcagcagccaatgggacaacag
tataaagtcacgcagaattccatgcatggcagccctgcccaatcaggcgccttccaacag
gcctccatgtctcccaacccctccagcaggttcggtcctcccccgtcagggtctggtggg
ggggggttcatgggccagcagaccagcccagtgcccagcccctacactccccagagcccc
gcagggtacctgcagttcccccccagctacactcagcaccaacagatccagcaagtgtct
gtggccagccccatggttccaggggggatgaggaacgtccatgagggaaagagctccagc
cagctgtcctctaaccatcacgccagcgacgactacatgagcatcgtgcagagactcaac
actgaggagagtgacccctccctgaggaacgcatcatttcctctgaggtcaccccagtct
ggctgctctccaacaggaagtgaaggaacgcccaaagccggctcccgcccccctctcatc
ctccagtcccctccgccctactcctcgccacgggagggcgctggagacacgcccggcgac
aagaaacagcagaagaagaagcccagcggggggtcctcctccgggggcgggggggcgctg
aaggacgacaaggacatgtacgacatcgtcacctcgccctccaaggacgtcaccaagctg
accctcaggctgtccagggtcaagtcgtccgagtcggacccagcgggtgaggcgctgtct
ggtgtggacccaggctcagacctggagcaggggtacccccctcaggagcaggggtacccc
cctcaggtgcaggggtacccccctcaggtgcaggggtacgccccggggctgcaggcgtac
cccccggggctacagcacaccatgggggctaagctgcagcaggccggctcctccgagtgg
ccagggggcgctctcctctcctcctcctcgccgtatgacgaggcggagttggacgcgctg
gctgagattgagaggatagagcgcgaggcagccaatgagagggagcgctgctccagagag
gtgcaggataaagacaaacccctgaagaagagaaagcaggactccttcccccctagccgg
gtgcggggggcccggggggcggggggtccaggtgggcccacgggagccccaggcagtgga
ggaggagcggggggcaacgcgggcaagctgaccccccaggaaggcagcgcagcggggaac
ggagccagccgccccgccctgatggtcagcatcgacctccagcaggctggccgcgccgac
gggcagctggacccctgcatggtggcccccatccctgccctggaggcccagcgctggcca
gaggagcccgccgagggccctgccgccgagggttccgacacggctggcgtgctccggctg
aagccgggcggccggccggaggtcatcaagaacaggatggaccgtcaggacagccgcagg
gaacccgcgaggcatcggcacgacgggaagccagacgcccgccgtcctgaggcggggaag
tcgtccggccggggagaccgggaaaggagggaccggcgctcgccggaggagcgtcaccgc
ggcgacagcccccgggtgaggcaagatgggcggggaggggggggctggaggggggcgggc
ggcctcgcagcggcggagccgtggcgacggaccgggaatcgtcccggttaccgaccgtcc
ggtagctccaagcagctggacgccagacctccagagttccctgctcacctgctggggggg
tcgaccggggcgctgaagaacttccagatccccaaggtgaagagggaccaggagggggcc
cctgggggcccggaggaggcctgggggcagcctagggtgaagctggagagactggggctg
gtgaaggacctggctaagggggccaagcccgtggtggtgctgcagaagctgtccatagac
gagctgcagaggttcatcacacacagcaagtctggagggaagaaccgcttatcagggagg
actgggaaaggaggtctggaccagtcagtgttgaaggatcttcctccagagctgctggca
gagatcgagtcgaccatgcccctgtgtgagcgtgtgaagatgaacaagaggaagagaagc
agcgtgaaggagcgcccgcgctacgccgaggtcagctccgaggacgaggacagcgaggcc
aacggagaactgatgaggaagcgagcgcggcgggagaaggaccggggctgggagcaggag
gagggggagcgccggcggagtggtagcttccaagatggccgccgcggctcggccagccgg
taccgggagtccagcggcgaggagtctccgccccccagcatgagcgagctggccaggaag
cagaagcagaaagagaagcagaagaagaggaaagcctacgagcccaaactcacccacgag
gagctgatggactcatctaccttcaagcggttctccaacagcatcgacagcatcctggag
aacctggaggacgtggacttcagtgtcatggaggatgacgatgagattcctcaggagctg
ttgctagggaaacaccagctgacagagctggccagcgagtctgccaagatcaaggccatg
ggcatcaccagccggatcccctcagagaagctggtgaaggttctcaacatcctggagaag
aacatccaggatggatccaggctctccacgctcatgaaccctgacaacgatggtgaggat
gaggagcgtttgtggcgtgacctcatcatggagcgcgtgactcgctcggccgacgcctgt
ctgacggcactcaacatcatgacgtctctgcacatggccaaggctgtatacatggaggac
gtgatcgagagggtgctgcagtacgccaagtaccacctgcagaacacgctctacccccag
tacgaccctgtctacagggtggacccccatcagggggcttgatgagcttcgaaggcgaag
cgtgctaagtgctccacccacaagcagcgcgtcatcatcatgctgtacaacaaggtgtgt
gatgtggtcaccaacatcgcagagctgctggacatccagttactgaccgacaccaccatc
ctgcaggtttcctcgatgggcatcactccgttcttcgtggagaacgtcgtcagtgagctg
cagctgtgcngcatcaagctggtcaccgccgtgttctctcggtatgagaagcaccgtcag
ctgatcctggaggagatcttcacctctctggccagactgcccaccagcaagcgcagcctc
cgcaacttcaggctgaacagcagtgaccaggacggggagcccatgttcatccagatggtg
acggccctggtgctgcagctcatccagtgtgtggtgcacctgccctgcgacagagacagc
ctggaggacgagtacgacagcaagatggaccaggacctgctcatcactaactcctatgag
acagccatgaggaccgcccagaacttcctctcagtcttcctcaagaagtgtggcagtaag
cagggggaggaggactaccgtccgctgtttgagaactttgtccaggacntgctgtccact
gtcaacaagcctgagtggcccgcctccgagctgctgctaagccttctgggaagactgctg
gtgcaccagttcagtaacaagcagacagagatggctctgagggtggcctcgctggactac
ctgggcaccgtggcggccaggctccgcaaggacgctgtcaccagcaccatggaccagcgc
ntcatcaaccgcatcctgaaggagaccgcaggcagtgatgagacgcagcagcttcagaag
gctttgctggactacatggaggagaacgcagaaaacaccccctctctggtgtttgccagg
aagttctacatcgcccagtggttccgggacacgggcactgagtcagagaaggccctgcgc
agccagaaccagcgtgacgacgactcttctgatgggcctcatcacgcccgcgacctggag
acggccggggagatcatgcagcgcgcagagagacgcaagaagttcctgcgcaacatcatt
aagaccagccccgcacacttcgccacgctcaggatgtcgtcagacacggtggactaccag
gacgcctgcctgatagtacgctacctggcctccatgagacccttctcccagagcttcgac
atctacctgacccagatcctgcgtgtcctgggggagagtgccattgctgtcaggactaaa
gccatgaagtgtctgtctgaggtggtggcagtggaccccagcatcctggcccggtcggac
atgcagcgcggggtgcacgggcggctcatggataactccaccagcgtcagggaggcggcc
gtggagctgctgggaagattcgtcctcagccgaccccagctgacggagcagtactacgac
atgctcatagagaggatcctggacacgggcatcagtgtgaggaagcgtgtgatcaagatc
ctgcgggacatctgtctggagcagcccaccttcagcaaggtgacagagatgtgtgtgagg
atgatacgcagagtcaacgacgaggagggcatcaagaaactggtgaatgagacattccag
aagctgtggttcacgcccacaccggctcatgacaaggacagcatgacccgcaagatcctc
aacatcactgatgtggtggcagcctgcaaagacacgggctacgactggtttgaacagctg
ctgcagaacctgctgaagtcggaggaggatgcatcctacaagcctgctaagaaggcctgc
atccagctggtggacaacctggtggagcacctcctgaagtacgaggaggccctgtcagag
aaccagggtgtgaactccagcaggctggtgtcctgcatcacctccctgtacctgttcagc
aagatcagagctcagctcatggtgaagcacgccatgaccatgcagccttacctcaccacc
aagtgcaactctgccagtgacttcatggtgatatgtaacgtggctaagatcctggagctg
gtggttcctctgatggagcaccccagtgagacctacctggccaccatagaagaagacctc
atgaagctcatcatcaagtacggcatgacggtggtgcagcactgtgtaagctgtctgggt
gctgtggtcaacaaggtcacacacaactacaagtttgtgtgggcctgcttcaaccgcttc
tatggggccctgaacaagctgaaggttcagcaccaggaggagcctaacagcaccacgctg
gccgctaacaagcccttcctgctgcgctcgctgttcaccgtgggggccctcgcacgccac
tttgacttcgacctggaggagttcaagggccccaacaagcagcaggtgatgatcaaggag
aaggttctggagctgctactgtacttcaccagacacgaggacgaggaggtccagtccaaa
gccatcatcggactagggttcctggtgatcatgcaccccagccagatgttcgtcccggag
gtgaagaacctgtataacagcatcctggcagacgctagcagctctgtgaacctgaagatc
caggtgctgaagaacctgcagacctacctgcaggaggaggactcccgcatgcaggaggcc
gaccgcgagtggaagaagctgtccaagcaggaggatctgaaggagatgggagacatctca
tcaggcatgagcagctccatcatgcagctctacctgaagcaggttctggaagctttcttc
cacacccagtcctccgtcagacactttgccctcaacgtcatcgccctcaccctcaaccag
ggcctcatccaccccgtgcagtgtgtgccctacctgatcgccatgggaacagacccagag
cccagcatgaggaacaaggctgaccagcagctggtggagatcgacaagaaatacacaggc
ttcatccatatgaaggcggtagcagggatgaagatgtcgtaccaggtgcagcaggcgatc
gcccagtcgtccaggcggagcagtatcatccggggcttccgtgtggacgagaccacggcc
gcgctgtgctctcacctgttctccatggtgcgcaccaaccgccagcaccgccgagccttc
ctcatctccctgctcaacttgttcgacgacagcgccaagacggaggtgaacatgctgctg
ttcatagcagacaacctggcctgcttccccttccagagccaggaggagcctctgttcatc
atgcaccacatagacatcaccctgtctgtgtcgggcagcaacctgctgcagtccttcaaa
gagtctctccttaaagagccgagacacaaggagaagaaggtgaagaaggcgagggagagg
aggaggagcggggggtcggagggctcgggggaccaggacgccacgcccatcagctgcagc
tccccgctcagcgaccagggagacggcgaggacgcgggccggaggcccaggaaggggcgg
cggcaggaggtcagctcggggtcggagtctgacctggaggacctggatgtggacgatgta
gagaaggtgatgcttctgctgccggacaaccccacctccctgctggacttcgccaacgcc
tcgcagggcatcctgctgctgctggtgctcaagcagcacctgaagaacctctacggcttc
tccgacagtaagatccagaagtactcgcccacagagtcggccaaggtgtatgacaaagcc
gtcaacaggaagcccaacatccacttcaacccccgccagaccatggacttcctatccaac
aacctggccaacgccacgcttactcacgacaccaagagacgggtcgtccggcagtacctg
gactttaaggtgctgatggagcacctggaccctgacgaggaggaggaggagggggaggcg
ggggccagtgccaacatcaggatcaaagccataaacgccctgctgggggggcctgggccc
cacccacgccacccgccccccgcccccgacaccgaggacgacgacagcgagggggacgag
aggacaccagggtcctctcggcgggtgaggcggtcaggggagccctctgacccgggccac
atgagcgaggcggtggactccatggacgtgatcgccctgtgctgccccaagtacaaggac
cgtcctcagatggctcgcgtcctgcagcgcacccccagcggctacagcgtgcagtggctg
gccggctcgtactctgggccctgggcggaggccaagaagagggatgggcgcaagcaggtg
ccctgggtggacaccatcaaggattcggacatcatctgcaaaaagattgccttgactagc
aaccacaaactgagcaacaaggtggttcagaggttacgatcgctctacgccgcacgcgac
agcgccctcagctaa
DBGET
integrated database retrieval system
