Osmerus eperlanus (European smelt): 134015105
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Entry
134015105 CDS
T10927
Symbol
ddx31
Name
(RefSeq) probable ATP-dependent RNA helicase DDX31
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oep01009
]
134015105 (ddx31)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oep03009
]
134015105 (ddx31)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134015105 (ddx31)
Protein phosphatases and associated proteins [BR:
oep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134015105 (ddx31)
Ribosome biogenesis [BR:
oep03009
]
Eukaryotic type
Pre-60S particles
Helicases
134015105 (ddx31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
134015105
NCBI-ProteinID:
XP_062310425
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All DBs
Position
28:8234967..8291355
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AA seq
644 aa
AA seq
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MSEDVLTKKSKGAPANVKDFKKKAKKRKFPLGFDHQEQSYKQGKMDQMDNKTHIKTSSLF
KNNPEILDVDRPTVTQVKENVFTSDSFSELSLHPHLVVTLNKVLNLTCMTCVQKQTIPVL
MCGRDAVVRSQTGSGKTLAYGIPLVQALQSVEPKIKRGDGPLAVIIVPTRELAQQTYQIF
LKLLKPFTWIVPGVLMGGEKRKAEKARLRKGINILISTPGRLVDHIKNTLSIAFSATRWL
ILDEADRTLDLGFEKDLTVILNSLNSTAPSRQNVMLSATLTDGLSRLTGVCMKNPVSIHV
SENSKTSSDIAYLDVAAQSQTMSFSVPDNLQQYVVVVPSKLRLVCLAAFILARCKFENGH
KLIVFVSSCEGVEFLFSLFTSVLCHPTTNQLHPLNFLRLHGNMKQRERTEVFQEFSVCRD
GVLLCTDVASRGLDLPKVTWIVQYSPTTAAEYVHRVGRTARIGAQGNSLLFITPAETAYI
SELANHNISLSEMKLQDILSCLMLDDAYKGRGKYHKSSGALEQEIRERATVLQTEFENVV
HANEENVQLAKKALQSFVRAYTAYPSSVKHIFHIRTLHLGHAAKSFGLRDAPQGLTQEGS
ADHAKGSGKAKNQAKRHDKNQRNHKLSAKERMSTLLCSEFSSGI
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggacgttttaacgaagaaaagcaaaggtgcaccagccaacgtgaaagatttc
aagaaaaaggccaagaagagaaagttccccttaggattcgaccaccaggaacaatcttac
aaacagggcaagatggaccagatggacaataagacccatatcaagacttcatcattgttc
aaaaacaacccagaaatccttgatgttgaccgacctactgtcacccaagttaaggagaat
gtcttcaccagtgactccttctctgagctgagcctgcatccacacctagtggtaactctc
aacaaagtcctgaacctaacatgtatgacctgtgtacagaaacagacaattcctgtcttg
atgtgtggacgagatgcagtggttcgctctcagacggggtctggtaaaactctggcctat
gggattccactggtccaggcactacagtcagtggagccaaagatcaagagaggagatgga
cctctggctgtcatcattgtccccaccagagaactggcccagcagacctaccagatcttt
ctgaaacttcttaagcctttcacttggattgtccctggtgttcttatggggggagagaag
aggaaggcagagaaagccaggcttcgtaagggcattaacattctgatctccacgccaggc
cgtctggtggatcatatcaagaacaccctcagcatagcctttagtgccactcgctggctc
atcctggacgaggcagacaggactctagacttgggttttgagaaggaccttacagtaata
ttaaactccctcaactctactgccccctccagacagaatgtcatgctttctgcaactctc
acagacggcctgtctcggttgacgggggtgtgtatgaaaaaccctgtcagtatccatgtg
tctgaaaactcaaagactagctctgacatcgcctaccttgatgttgccgcccagagccag
acgatgagctttagtgtgccagacaatctccagcagtacgtggtagtagtgcccagcaag
ctcagacttgtctgcctggcggccttcatcttggcaagatgcaagtttgaaaatggccac
aagctcattgtgttcgtgtccagctgtgagggggtagagttcctcttctctctcttcacc
tccgtattgtgccacccaaccaccaatcaattgcacccacttaacttcctgcgtctccat
ggcaacatgaagcagagggagcggactgaggtgttccaggagttctctgtctgcagggac
ggcgtactgctctgtactgatgtggcatcgcgaggtttggacttacccaaagtcacctgg
atagtacaatactcccctaccacagcagcagagtatgtgcaccgtgtgggtagaacggct
cgcattggggcacaaggaaacagcctcctcttcatcacccctgctgagacggcctacata
tccgagctggccaatcacaacatcagcctttcagagatgaagctgcaggatatcttgagt
tgcctgatgctggatgacgcatataaagggcgaggaaagtaccacaagtcctcaggggct
ctggagcaagagatccgtgagagggctactgttctccagacagagtttgagaacgttgtc
catgccaacgaagaaaatgtccaactggcaaagaaagccttgcagtcctttgtgcgagca
tacactgcctatccttccagtgtgaagcacatcttccacatacgcaccctccatctgggc
cacgctgcgaagagcttcggcctgcgagatgcaccccaaggcctgacacaggagggttca
gctgaccatgccaaaggctctgggaaggctaagaaccaagcgaaaagacatgacaaaaac
cagaggaatcataaacttagtgctaaagagcgaatgtcgactctcctgtgctcagaattc
tccagtggaatttag
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