Osmerus eperlanus (European smelt): 134015255
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Entry
134015255 CDS
T10927
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03030
DNA replication
oep03410
Base excision repair
oep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
134015255 (pole)
03410 Base excision repair
134015255 (pole)
03420 Nucleotide excision repair
134015255 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oep03032
]
134015255 (pole)
03400 DNA repair and recombination proteins [BR:
oep03400
]
134015255 (pole)
Enzymes [BR:
oep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
134015255 (pole)
DNA replication proteins [BR:
oep03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
134015255 (pole)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
134015255 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
CpXC
Zn_ribbon_11
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
134015255
NCBI-ProteinID:
XP_062310645
LinkDB
All DBs
Position
28:2615243..2632851
Genome browser
AA seq
2295 aa
AA seq
DB search
MVLQNSGKYKSERGQKGDQDNQQDDGSSMSAVKRLERVHFTDEMDNRFGFERMKDPGEKT
GWLINMHPAEILDDDKRMVSAVDYYFIQDDGRRFKVALPFKPYFYIATKKNCEREVISFI
SKKYQGKVATLEVVPKEDLDLPNHLVGLKRTYIKLSFTTVDDLIKVKREISPAVRKNRER
EKSNETYTSMLSSALAGGSVMTGEEDGMSKKISDQMDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEAGLIQRWFEHVLETKPNIF
VTYNGDFFDWPFVETRAAQHGLNMYNEIGFQKDNQGEYKATQAIHMDCYRWVKRDSYLPV
GSQNLKAAAKAKLSYDPVELDPEDMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIVFPNKQEQVFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVERTLRHAIEEEEKIPLEQVTNLNEV
CDEIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRKMAWQWRGEIMPASRSEFHRIQQQLESEKFPPFFPNGRPRAFHQLNREEQARHE
KKRLGDYCKRAYKKVHQTKLQERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDSGDAVEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQAREIIEQIGRPLELDTDGIWCVLPNTFPENFVIKTSNEKKPKVTISYPGAMLNI
MVKEGFTNEQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYI
ISRKPEGAPVTERAIPLAIFQAEPSVKKHFLRKWLKTPSLHDLDIRTILDWNYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQA
LGEGQAADMEDFGQAPRPLQPAILISTKRRRPSQGEDSQVESQDTELTQSWREILGAPPP
MGDTQEERLVWLRYHKKKWELQLKQRKERRKRRRLLDGQPQPVGGGLIRDGPTTGLGGFL
RKTARSVLDMPWQVVQIAETSHPGLYKLWAVIGNDLHCMKLNIPRVFYVNQKVPKQEEGA
AYKKVNRMLPRSNMVYFLYQYSVPEDMYQQNINEINADLSAPDIEGVYETQVPLLFRALV
QLGCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKAL
FGLFIPSQRKASVFVLDTVRSNQMPNLSSVYGVERSALLEKTSEDLLPPEKHSFEVRAES
DVKAIHRALQRILLNYKEERRGPTLVAVQSNWELRRLAAGMPVLEEFPVVPVHVVDEISY
NVLDWQRHGARRMLRHYLNLDSCLSQAFDMARYYHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTSRPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEEMVSGNQGASAVASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVAEFKRL
GSTVVYGNFNRIILCTKKRRIDDAIGYVEYITNSIHSREIFHSLSISFSRCWEFILWMDP
SNFGGVKGKLPSSLLYGEDGATRKKKKGKEEGEEGDSEEEEEEDQQEEEDGDGETDEVEE
MIESSWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMREELRRNAPGATPVKRRGGSQAS
QPAGDLSALPGMISFSQEYVASELTQNFFTITQKIQKKVTGTRSGAQPSEMFPVLPGSHL
PLSNPALEFIKYVCQVLSLDGNVVNQVNKLKRDLLRLVDVGEFSEQSQFRDPCNSYILPE
VICHQCNFCRDLDLCKDPTVGQDGSILPHWFCSNCQTQYETESIEMALVDALQKKLMSYT
LQDLVCSKCKGVKEANMPVYCNCAGDFALTFPTKSLSEQIRVFRSIAGHYSMSFLEETID
WLLSMSLQISETTTH
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggttctacaaaatagtggaaaatacaaatcagagcgcggacaaaagggtgaccaggat
aaccaacaggatgatgggtcatccatgtcggccgtcaaacggctggagcgtgtccatttc
actgacgagatggataaccgctttggattcgaaagaatgaaagaccctggagaaaaaacc
ggttggctgatcaacatgcaccctgctgaaatcctggacgatgacaagagaatggtcagt
gctgttgactattacttcatccaggacgacggccgcaggttcaaggtggcccttccattc
aaaccgtatttttacatagccaccaaaaagaactgtgagagggaggttatttcatttata
tccaagaagtaccaagggaaggtggcaacgcttgaggtagttcccaaggaagacctggat
ctgcctaatcatctggttggcctgaagaggacctacatcaagctgtctttcaccaccgtg
gacgacctcatcaaggtcaagcgggagatttctccggccgtgcgcaagaacagagagagg
gagaagtcgaacgagacctacacctccatgctgtcaagtgccttggcaggtggcagcgtt
atgaccggcgaggaagacggcatgtccaagaaaatctccgaccagatggacaacatagtg
gacatgagagagtacgacgtaccctaccatgtccgcctctccatcgacctcaaaatccac
gtggctcactggtacaatgtgaggtaccgaggcagcgcctaccctcctgagatagtgcgg
agagacgacctggtggagcgacctgatccggtggttctggccttcgacatagagaccacc
aaactgcctctcaagttcccagacgcagagaccgaccagattatgatgatctcctacatg
attgatggccagggctacctgatcaccaacagagagattgtttcggaggacatcgaggac
tttgagttcactcccaaaccagagtacgaggggccgttcactgttttcaatgagcctgat
gaggccggtctcatccagagatggttcgagcatgtcctggaaaccaagccaaacatcttt
gtcacgtacaacggagacttctttgattggcctttcgtggagacgagggctgctcaacat
ggactcaacatgtataatgagatcggcttccagaaggacaaccagggagagtacaaggcc
acgcaagccatacacatggactgctaccggtgggtgaagagagacagctacctgccggtg
ggcagccaaaacctaaaggctgccgccaaggccaagctgagctacgacccggtggagctg
gaccctgaggatatgtgtcgcatggccaccgaggagccccagactttggccacctactct
gtgtctgacgccgtggcaacgtattatctgtacatgaaatacgttcatcccttcatcttc
gctctctgcaccatcattcctatggagcctgacgaggtgctgcgtaagggatcagggacg
ctgtgcgaggctctgctcatggtgcaggccttccacgccaacatagtgttccccaacaag
caggagcaggtcttcaacaagctgacggacgacggccacgtcctggactcggagacctac
gtcgggggccacgtggaggccctggagtctggggtgttccgcagcgacatcccctgccgc
ttcaaaatgaacccggctgcgttcgacttcctgctccagcgcgtggagcgcacgctccgc
cacgccatcgaggaggaggagaagatccccctggagcaggtcaccaacctgaacgaggtg
tgcgacgagatcaagaagaagctgatctctttgaaggaagttcccaacaggattgagtgc
cccctcatttaccatctggacgtgggggccatgtaccccaacataatcctcaccaacaga
ctgcagccgtcggccatggtggacgaggccacgtgcgcggcctgcgacttcaacaagccc
ggcgccacctgtcagaggaagatggcgtggcagtggaggggcgagatcatgcccgccagc
cgcagcgagttccatcgtatccagcagcagctggagtctgagaagttcccgccgttcttc
cctaacggccggccccgcgccttccaccagctgaaccgcgaggagcaggcgcgccacgag
aagaaacgtctgggagactactgcaagagggcctacaagaaggtgcaccagaccaagctg
caggagagggtcaccaccatctgccagagagagaactcattctatgtggacaccgtcaga
gcgttcagggaccgcagatatgagttcaaggggcttcacaaggtgtggaagaagaagctg
tctgccgcccaggacagtggagacgcagtggaggtgaagcgctgtaagaacatggagatc
ctgtacgactccctgcagctggcccacaagtgcatcctcaactccttctacggctacgtc
atgaggaagggggcgcgctggtactccatggagatggctgggattgtgtgctacaccgga
gccaacatcatcacccaagctagggagatcattgaacagatagggaggcccttggagttg
gacactgacgggatctggtgcgtcctgcccaacacgttccccgagaactttgtgatcaag
acgagcaatgagaagaaacccaaggtgaccatctcgtacccaggggccatgctgaacatc
atggtgaaggagggcttcacgaacgagcagtaccaggagctggtggacccagcctccctg
acctacgagacgcgggcggagaacagcatcttcttcgaggtggacgggccctacctggcc
atgatcctgcccgcctccaaggaggaggggaagaagctgaagaaaaggtacgcggtgttc
aacgaggacggctccctggccgagctgaagggcttcgaggtgaagaggaggggggagctg
cagctcatcaagatcttccagtcgtccgtgttcgaggccttcctcaagggcaccaccctg
gaggaggtgtacgcctccgtggccaaggtggccgactactggctggacgtgctctacagc
aaggcagccaacatgcctgacgccgagctgttcgagctgatctcggagaaccgctccatg
tccaggaagctggaggactacggagagcagaagtccacctccatcagcacggccaagcgc
ctagcggagttcctgggggaccagatggtgaaggacgccgggctgagctgtcgctacatc
atctcccgtaagcccgagggcgcccccgtcacagagagagccatccccctggccatcttc
caggcagagcccagcgtcaagaagcacttcctgcgcaagtggctgaagacgcccagcctc
cacgacctggacatccgcactatccttgactggaactattacatagagaggctgggcagt
gccatccagaagatcataaccatcccagctgctctgcagcaggtgaagaaccctgttccc
agagttcgccacccagactggctccacaagaagctactggagaagaatgacatctacaag
cagaagaagatcagcgagctcttcaccagcgaagggaagagacaggttgcccaccaggcc
ctgggggaggggcaggcagcagacatggaggacttcggccaggccccgcggcccctgcag
ccagccatcctgatcagcaccaagcgcaggcgtccgtcccagggggaggacagccaggtg
gagtcccaggacacagagctcacccagtcctggagggagatcctgggggctccccctccc
atgggggacacacaggaggagcgcctggtgtggctgcgctaccacaagaagaagtgggaa
ctgcagctgaagcagaggaaggagaggaggaagaggaggaggctgctggacggccagccg
cagcccgtggggggaggcctgatcagggacggacccaccaccggcctggggggcttcctg
cgcaagacggcccgcagcgtgctggacatgccctggcaggtcgtacagatcgcagagacc
agccacccaggcctgtacaagctgtgggctgtgatcggcaacgacctccactgcatgaag
ctcaacatccccagggtgttctacgtcaaccagaaggtccccaagcaggaggagggagca
gcctacaagaaggtgaacaggatgctgcctcgctccaacatggtgtacttcctgtaccag
tactctgtgcctgaggacatgtatcagcagaacatcaacgagatcaacgctgacctctcc
gccccggacatagagggcgtctacgagacccaggtgcccctgctgttccgagcgctggtc
cagctgggctgcatgtgcatggtcaacaagcaggtggtgagggacctggcgggccgggaa
gccgacaccttcgacctggagcacctggagatgaggtccctggcccagttcagctacctg
gagcccggaagtgtccgtcacatctacctgtatcaccacagccaggggcacaaggctctg
tttggcctgttcatcccctctcagcgcaaggccagcgtcttcgtcctggacacggtccgc
agcaaccagatgcccaacctgagctccgtgtacggggtggagcgctccgccctcctggag
aagaccagcgaggacttgctgccccctgagaagcacagcttcgaggtgcgggcggagagc
gacgtcaaggccatccaccgcgccctgcagcgcatcctgctcaactacaaggaggaacgc
cggggccccactctggtggcggtgcagtctaactgggagctgcgacgtctggcggcgggc
atgccggtgctggaggagttcccggtggtgccggtgcacgtggtggacgaaatcagctac
aacgtgctggactggcagaggcacggggcgcgccgcatgctgcgacactacctcaacctg
gacagctgcctgtcacaggctttcgacatggccaggtactaccacctgcctgtggggaac
ctgccacaagacgtgtccatctttggctcggacctgttcctggccagacacctgcgcaag
cacaaccacctgctgtggctgtcccccacgtccaggcccgacctggggggcaaggaggca
gacgacagccgcctggtcatggagagcgacgacaggggctctgtggagatcaacgctcag
ggctgctactccacagtgtgtgtggagctggacctccagagcctggcggtgaacaccatc
ctgcagtcccagcacgtcaacgacatggaggggggtgccagcctgggcgtcagcttcgac
gtcatccagcaggcctccctggaggagatggtgtccgggaaccagggcgccagcgccgtg
gccagctacgacgagacggcgctctgctccaacaccttcaggatcctgaagagcatggtg
gtcggttgggtgcgggagatcacccagtaccacaacgtctacgccgacaaccaggttatg
cacttctaccgctggctgcgctcccccagctctctgctgtatgaccccgccctccaccgc
acccttcacaacatgatgaaaaaggtcttcctgcagctggtggcagagttcaagaggctg
ggctccactgtggtgtacgggaacttcaacagaatcatcttgtgtaccaagaaacgcagg
atcgacgatgctatcggctacgtggagtacatcaccaacagtattcactcccgtgagatt
ttccactccctgtccatctcgttctcccggtgctgggagttcatcctgtggatggatcct
tccaacttcggaggggtgaagggaaagctgccttccagccttctctatggagaggacgga
gcgacccggaagaagaagaagggaaaagaggagggtgaggagggggacagcgaggaggag
gaggaagaggaccagcaggaggaggaggatggagacggggagacagacgaggtggaggag
atgatagagagtagctggaacatcatgcagtacctgccccagactgcctcctgccagaag
tacttcctcatgatcgtgtcagcctacatcgctgctgtctaccacagcatgagggaggag
ctgagacgcaacgctcccggagccacgcccgtcaagaggcgtggcggaagccaggcgtcg
cagccagcgggagacctgagtgcacttcctggtatgatctccttctcccaggagtacgtg
gccagcgagctgacccagaacttcttcaccatcacccagaagatccagaagaaggtgacg
ggaaccaggagtggagcccagccctcggagatgttcccagtcctgcctggctcccacctg
cctctctccaaccctgccctggagttcatcaaatacgtgtgccaggtcctctccctggac
ggcaacgttgtgaaccaggtgaacaagctgaagagggacctgctccgcctggtggacgtg
ggcgagttctccgagcagagccagttccgcgacccctgcaactcctacatcctgccggag
gtcatctgccaccagtgcaacttctgccgcgacctcgacctctgcaaggaccccactgtg
ggccaggatggctccatcctgccccactggttctgctccaactgccagacccagtatgag
actgagtccatcgagatggcgctggtggatgccctgcagaagaagctgatgagctacact
ctgcaggacctggtgtgttccaagtgtaagggagtgaaggaggccaacatgcccgtgtac
tgcaactgtgccggagacttcgccctcacgttccccacaaagagcttgtccgagcagatc
agagtgttccggagcatcgcgggtcactacagcatgagcttcctggaggagaccatcgat
tggctgctctccatgagcctgcagatcagcgagacgacgacacactga
DBGET
integrated database retrieval system
