Osmerus eperlanus (European smelt): 134015324
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Entry
134015324 CDS
T10927
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134015324
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134015324
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134015324
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
P-loop_SecA
ResIII
RPS31
HTH_53
Motif
Other DBs
NCBI-GeneID:
134015324
NCBI-ProteinID:
XP_062310752
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All DBs
Position
28:2202019..2207247
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AA seq
602 aa
AA seq
DB search
MGENWEEEDIQVFTGTSTNNGDGVCAAGGVRGGSFHTPAGNRSSNSGGRGNRGGRDGARC
LSSDTSDTGPEKGSEPNGNDNDSGSSRNRENVIGGRGDRNTIDGGRDGFSNSFPDASNND
NLDENHNAGPKVTYVPPPPPEDETSIFSQFQKGVNFDKFDNIQVEVRGRDPPPAIMSFEE
AGLCPTLSRNITKSGYKKPTPVQKHSIPIISTGRDLLACAQTGSGKTAAFLLPILQTLMS
DGVTADGFRQIQEPEVIIVAPTRELINQIYLDARKFSYGGCLRPVVVYGGISSAYAIREV
MRGCNVLCGTPGRLLDIIGKGKVGVGKLRYLVLDEADQMLDMGFEPAMRSLVGSPGMPPK
EERQTLLFSATYPEDIQRLAADFLRTDYIFLAVGQVGGACSDVEQNVIQVTQFSKRDQLV
ELLQTTGPERTLVFVGTRKKADFIATFLSQVKIPTTSIHGDREQQEREVALHDFRSGKYP
VLVATSVAARGLDIEHVQHVVNFDLPSGIDEYVQRIGRTGRCGNTGRAVSFFEPDADTPL
AHSLVKVLEGSQQEVPSWLEEVAASGHGTAAFCPQRSDFESMDTHKSLPGAQSLPSEEEL
WE
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaactgggaggaagaggatatccaggtgttcactgggacttcaaccaataat
ggtgatggtgtatgtgctgcaggtggagtcaggggaggaagcttccacaccccagcaggg
aacagaagctccaactcaggaggtcgagggaacagaggaggaagggacggtgcacgatgc
ttaagcagtgacacttctgatacaggacctgaaaaagggagtgagcccaatgggaacgat
aatgacagtggaagttcacggaacagagaaaatgtcattggaggaagaggtgacagaaac
acaatagatggaggaagagatggattcagcaattcattccctgatgcatccaacaacgac
aacttggatgaaaaccacaatgcaggtcccaaggtgacgtatgttccacctccccctcct
gaagacgagacctccatcttctctcagttccagaagggggtcaactttgacaagtttgat
aacatccaggtggaggtgcgtgggagagaccctccacctgccatcatgtcatttgaggag
gctggtctgtgtccgaccctgagcaggaacatcaccaagtctggatacaagaagcccact
ccagtccagaaacacagcatccctatcatatccactggacgagacctgctggcctgtgcc
cagactggatcagggaaaacggctgccttcctgctccctatcctccagaccctgatgtca
gacggggtcacggcagacgggttcaggcagatccaggagcccgaggtcatcattgtggcg
cccaccagggaactcatcaaccagatctacctcgacgcccggaagttctcctacggcggg
tgtttgcgcccggtggtcgtgtatggagggatcagttcggcctacgccattcgggaggtg
atgcgggggtgcaacgtgctgtgtgggaccccaggaagactgctggatatcatcggcaaa
ggaaaggtgggagtcgggaagctgcgctacctggttctagacgaggcagaccagatgttg
gacatgggctttgaacccgccatgcgctccctcgtggggtcgcctggaatgccccctaag
gaggaacgccagacgctactgttcagcgccacataccctgaggacattcaaaggttggct
gccgacttccttcgaacggactacatcttcctggcggtgggtcaggtgggaggagcctgc
agcgatgtggagcagaacgtgatccaggtcacccagttctctaagagagaccaactggtg
gagctgctgcagacgacaggccccgagcgaactctggtgtttgtagggaccaggaagaag
gcggatttcatcgccacctttctctcccaggtcaagattcccaccaccagcatccacgga
gacagggagcagcaggaacgggaggtagccctacacgatttccgttccggtaagtatcct
gtcctggtggccacgtcagtggcagcacgaggcctggatatcgagcatgtgcagcatgtg
gtgaactttgacctgccctccggcatcgatgagtacgtgcaacgcatcggaaggactggt
cgctgtggcaacactgggcgggcagtgtcgttctttgagccagatgctgacacgccattg
gctcactccttggtgaaagttctggaagggtcccaacaggaagttccctcctggctggag
gaagtcgcagccagtggtcatggcactgcagcgttctgtccacaaaggagtgactttgaa
tccatggacacccacaagtctctacctggagcccagagcctgcctagtgaggaggaatta
tgggagtga
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