Osmerus eperlanus (European smelt): 134016047
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Entry
134016047 CDS
T10927
Symbol
tmc8
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
134016047 (tmc8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oep02000
]
134016047 (tmc8)
03037 Cilium and associated proteins [BR:
oep03037
]
134016047 (tmc8)
Transporters [BR:
oep02000
]
Other transporters
Pores ion channels [TC:
1
]
134016047 (tmc8)
Cilium and associated proteins [BR:
oep03037
]
Other cilia and associated proteins
Stereociliary proteins
134016047 (tmc8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
RSN1_7TM
Motif
Other DBs
NCBI-GeneID:
134016047
NCBI-ProteinID:
XP_062311454
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MEDEVRKTVKFRTMLSSDSGDSIVSDESCIYYQTEIFTQLPSSQAYRPHVRQRERVDSVA
QDAEPKPGDNCRHVPLARGSKDKASSEPLRSLAVCMQAKREARDRRRLQMRSIGSWESWR
RSQSIARKRLWQQVGGAIPRLLPWRQTLHTIEGRFGVGVKAYFLFLRYLIFCSLLHCLII
SGSILEPSRRFGRGNTTEPLVWGGNDTFTDLFLGSGFLERSPLFYGFYTRGSLDLPCLNT
PLLFLIGILSLLVLSLVMVVRRTVVGYKHTWLLGNRYNFHVSYKIFCGWDYNIQNPPMAA
LEHSFIWNDLKVFLEEQRFHEREAQRTWPQWARLYFLRVFINFLVVSMLGGAFLLIYFST
DISQRQAGKSGDNWLVSVLLQYLPPLTMSLVNLLFPHIFRIFSSFEDYSLTTQVNATLVR
SIFLKLACLGXYLLYLFKKDKQENQFGKEMYKLCLFDFLAGFCNTFFFAYPLKLCVERWP
LSWLARVSGRQSFQIPLNVLDLVYTQTVSWVGVFYCPLLPLLGTAKLVAVLYIKKFMVMR
CCVPEQRMFRASRSTVLFHSCFXAGLVMALVTLGSTYT
NT seq
1735 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgaagtacgcaagactgtcaagttccgaacgatgctttcaagtgacagtggt
gactccatcgtatccgatgagtcatgcatctactatcagactgagatctttacccagctt
cccagctcccaggcttacaggccccacgtcagacagagggagcgggtagacagcgtggcc
caggatgcagagccgaagcctggggacaactgccgtcatgttcccctggctagaggttcc
aaagacaaggcctccagtgagcctctgaggagcctggctgtgtgtatgcaggcgaagagg
gaggccagggacaggaggagactgcagatgcgttccattggctcctgggagtcgtggagg
cggagccagagcatcgccaggaagaggctctggcagcaggtgggaggggccatcccaagg
ctgctgccatggagacagacactgcacaccatcgaggggaggtttggtgtgggtgtgaag
gcatacttcctgttcctgaggtacctgatcttctgcagcctgctgcactgtctgatcatc
tccggctccatcctggagccttccaggcgcttcggcagaggcaacaccacagaaccgctg
gtgtggggagggaacgacacctttacagacctcttcctgggctcgggatttctggaacgt
tctcctctgttctacgggttctacacgcgcggttccctggacctgccatgtctgaacacc
cctctgctcttcctcatcggaatcctcagcctcctcgtcctcagtctggtcatggtggtg
cggagaacggttgttggctacaagcacacctggttgctcggcaaccgctacaacttccac
gtgagctacaagatattctgtggctgggactacaacatccagaatcctcccatggcagcc
ctggagcacagcttcatctggaacgacctaaaggtcttcctggaggagcagaggtttcac
gagcgggaagcccagaggacctggccccagtgggctcgcctctacttcctgcgagttttc
atcaacttcctggtggtgtcgatgctgggcggggccttcctcctcatctacttctccacg
gatatatcacagcgacaggcggggaagagtggagataactggctggtgagcgtgttgttg
cagtacctgcctcccttgaccatgtccctggtcaacctgctgtttcctcacatcttcagg
atcttctcctcctttgaggactactccctcaccacgcaggtcaacgccacacttgtcagg
agtatcttcctcaagctggcctgtctgggantctacctgctctacctgttcaaaaaggac
aaacaggaaaaccagtttggtaaggagatgtacaagctctgtctgttcgacttcctggcc
ggtttctgcaacaccttcttcttcgcgtaccctctcaagctgtgcgtggagaggtggccg
ttgtcgtggctggcgcgggtgtcggggcggcagagtttccagatccccctgaacgtgctg
gacctggtctacacccagacggtcagctgggtgggcgtgttctactgccccctgctgccc
ctgctggggacagccaagctggtggccgtcctgtacatcaagaagttcatggtcatgcgg
tgctgtgttccggaacagagaatgttccgggcctccagatccacggttctgtttcactca
tgcttcnntgctgggctggtcatggccctcgttactctgggatcaacctacaccc
DBGET
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