Osmerus eperlanus (European smelt): 134016451
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Entry
134016451 CDS
T10927
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134016451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134016451
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
134016451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
134016451
NCBI-ProteinID:
XP_062311794
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MSAEETDKTTDGSGGEDEEEWLYGDEGEEGAEQSEPDRGAAQPAEGETLQQGGEEKAEKE
AVQEEGASDSDSDDDDDDVCVTIGNIKSGGSSQYSVFGASPVNLNIKTDGRTHSAVGSRP
RGVDLQAGGSISGLPVMEVDVESLEDKPWRKPGADISDYFNYGFNEDTWKSHCEKQRRLR
ANYEGLPSTKILVQQGRMCHGEKGGRSEYSSSRSSRISSGTIDVIGGQSGCISRVEGRRR
PNSEGNNIQVVSQPSSDAEAPPTKMSPFFPPNIPPPPFLPPPNVSSAPPLIPPPRIPISV
PPPGFPLLPGAPPPSLLPSLDRRRRDFRHSRDRERDRERDRERDRERDRERCYSPAGDIR
ARNTHSSHCEGYDGPPAPPFPFPPGVYPPIPGWPGVIDSAKAWEYFSRQERERERGHDKD
RERGRERAHDKERERGRDRERQHSPSSPLYHSEEERPHHRDHEERGYRDRYSRERRLRDK
DEGRHKSSRSSSRRKQDSEEGDGHRRHKHKKSRRSREDKETNDEPSADQENQSGAAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctgaagaaacggacaaaacgactgatggaagcggcggagaagacgaggaggaa
tggttatatggtgatgaaggtgaggagggggcggagcagtcggaacctgacaggggtgct
gcccagcctgctgaaggggagactctccagcagggcggagaagagaaggcagagaaggag
gcggtgcaggaggaaggagccagtgacagtgacagtgatgatgatgatgatgatgtgtgt
gtgaccattggaaatataaagtctggtggatcctctcagtacagtgtctttggagcctcc
cctgttaatctcaatattaaaacagatggcaggacacattcagcagttggctccaggccc
cggggggtggacctgcaggctggaggcagcatcagtggcctgcccgtcatggaggtggac
gtggagtctttggaggataaaccctggaggaagccaggtgccgacatctctgactacttc
aactatggctttaatgaggacacgtggaagtcccactgtgagaagcagaggcgactgcga
gccaactacgagggcctgccctccaccaagatcctggtccagcaggggcgcatgtgccat
ggagagaaagggggccgttctgagtactcttcctccagatccagcaggatatccagcggc
accatcgatgtgattggaggacagtctggctgcatcagcagggtggagggacgacggcgc
cccaacagcgaaggaaataacatacaggtggtgtcacagccctcatctgatgcagaggcc
cctcccactaagatgtctcccttcttcccccccaacatcccccctccacccttcctgcct
ccccccaatgtcagctccgcccctcccctcatcccccctccacggatccccatcagtgtc
cctccacctggctttccccttctacctggagcccctcccccctctctcctcccgtccttg
gacagaaggaggagagacttcagacacagccgagacagggagagagacagagagagagac
cgggagagagaccgggagagagatcgggaacgctgctactctccagccggagatatcaga
gccaggaacacacacagttctcactgtgagggctatgatggaccccccgccccccccttc
cccttccctccaggtgtgtaccctccgatcccaggctggcccggggtgattgacagcgcc
aaggcctgggagtatttctcccggcaggagcgagagagggagcgaggccacgacaaggac
agagagcgagggagggagcgcgctcacgacaaggagagggagagagggcgggacagagag
cggcaacacagcccctcctcccccctctaccacagcgaggaggagaggccacaccacagg
gatcacgaggagcgcggctacagagatcgctacagcagagagaggaggcttcgtgacaag
gacgagggcaggcacaagtcctcacgcagcagcagcaggaggaaacaggacagtgaggag
ggagatggccaccgcagacacaaacacaagaagagcaggaggagccgggaggacaaggag
acaaatgatgagccctctgcagaccaggagaaccaatcaggagcagccaagtga
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