Osmerus eperlanus (European smelt): 134016494
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Entry
134016494 CDS
T10927
Symbol
exosc1
Name
(RefSeq) LOW QUALITY PROTEIN: exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
134016494 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
134016494 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
SPK
Motif
Other DBs
NCBI-GeneID:
134016494
NCBI-ProteinID:
XP_062311841
LinkDB
All DBs
Position
Unknown
AA seq
206 aa
AA seq
DB search
MSPMKLCVPGERLCSTEDCIPGTGTYLRHGQVYSSLAGYVLRKNEGGGGGWGGGGGWGEE
LPVISVLRETETQLLPGVGAIVTCKVTSINPRFAKVHILYVXSTPLKDRFRGTIRKEDVR
ATEKDKVEVYKSFRPGDIVLAKVISLGDVQSNYLLTTGENELGVVVAHSEAGAQMVPISW
CEMQCPXTHSKEFRKVARVQPEYLQA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggggagaggctgtgcagtactgaggactgtatc
cccggcacgggcacctacctccgccacggacaagtgtactcctcactggccggatacgtc
ctgcggaagaacgaggggggaggaggtgggtgggggggaggaggtgggtggggggaggag
ctaccagtgatctcagtcttgagggaaacagaaacacagctactacctggcgtgggagcg
atagtcacgtgtaaggtgacaagcatcaaccccaggtttgccaaggtgcacattctctac
gtangctccacccctctgaaagaccgcttcaggggcaccatcaggaaagaagatgtgaga
gcgacagaaaaggacaaggtggaggtgtataagagctttcgtcctggagacatcgttttg
gccaaagtcatctcgctgggagacgtccagtccaactacctgttgacgacgggggagaac
gagctgggcgtggtggtggctcacagcgaggctggagcccagatggtgcctatcagctgg
tgtgagatgcagtgtcccnagacgcactccaaggagttccgcaaggtggcgagggtgcag
ccggagtacctgcaggcgtga
DBGET
integrated database retrieval system
