Osmerus eperlanus (European smelt): 134016552
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Entry
134016552 CDS
T10927
Name
(RefSeq) LOW QUALITY PROTEIN: short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
oep04040
]
134016552
Ion channels [BR:
oep04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
134016552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
SWIRM-assoc_3
Motif
Other DBs
NCBI-GeneID:
134016552
NCBI-ProteinID:
XP_062311881
LinkDB
All DBs
Position
Unknown
AA seq
869 aa
AA seq
DB search
MENLTPEQWREIVNKKMRFPPELITAIHEGNTLEISRLLTTPDGMLRQLDESEDRLWREA
LNLAIRLGKESTLDTLLETVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDLEKGNKMDV
HSFSQAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLTQKGHNIPRPHTISCICLECR
NGRQYDLLKFSLSRINTYRGIASRAYLSVASEDAMLSAFRLSRELRKLSKKEPEFKPQYL
ALEELCQEFAVELLGMCRNQSEVTTILNNCGEEGEDELDEQTFEEGIPNLERLRLAVNLN
QKQFVTHPICQQVLSSIWCGNLTSWRGSRTAWKLLVSLGIFLAMPLLCLVYWIAPKSKIG
KTLKIPVIKFLLHSASYMWFLITLLGESISMEVYRQDFASRKQNILHSSLHMVWVAGFFW
FECKEVWIEGLRSYFLDWWNVLDMMVLSMYLASFALRVLIMLKGYVLCQGLGLGYGEECE
YFTQTERNEWWQEDPQFISEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMR
FLFILMIIGTAFLCGVNNIYVPYIISPRLGRFNETFHFLFWTMFGVANQGYVDMPEFVLA
EFVGRMLYGIFTLVIVIVLLNMLVAMITNSFQKIEDAADVEWKFARSKLYLSYFXEGLTM
PAPFNILPSPKAAFYLIRGIFRKLCCCCNLNQAQDYPPIPSISNGAQSDGGGVGESRSPY
RLQVIKALVQRYIETARREFEETKRKDVGNRITELSKLMGKLHSELKQMHQSMGSSSGGA
KGGDSEVLSKYIQGAKNNFRGFNTTHGEAPSFAIALHRNRVEGARKEEGKSSHDTGLESQ
GDLSSPEKETEVQEEKNTGTEKTMTQDGS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccttacgccagaacaatggcgggagatcgtgaacaagaagatgcgcttcccg
ccggagctgatcacggccatacacgaagggaacacgttggagatcagcaggctgctgacc
acgccagacggcatgcttcgacagctggacgagtccgaggaccggctgtggagggaggcc
ctgaacctggccatccgcctgggcaaggagagcaccctggacaccctgctggagacggtc
aagtttgacttccgccagatccacgaggcgctgctggtggcggtggacaccaaccagccg
cgcgtggtgaagaggctgctggaccggctggacctggagaagggaaacaagatggacgtg
cactccttctcccaggccatcttcgaccactccatcgacgactcgcagttcgcccccggc
gtcacgccgctgacgctggcgtgccagaaggacctctacgagatcgtcaccatgctgacc
cagaagggccacaacatcccccgcccgcacaccatctcctgcatctgcctggagtgccgc
aacgggcggcagtacgacctgctcaagttctcgctgtcccgcatcaacacctaccgcggc
atcgccagccgcgcctacctgtccgtggcctccgaggacgccatgctgtccgccttccgc
ctcagccgggagctgcgcaagctctccaagaaggagcccgagttcaagccccagtacctg
gccctggaggagctgtgccaggagtttgcggtggagctgctgggaatgtgccggaaccag
agcgaggtgaccaccatcctcaacaactgcggcgaggaaggcgaggatgagctggacgag
cagaccttcgaggagggcatccccaacctggagcgcctccgactggctgtcaacctcaac
cagaaacagtttgtgactcaccccatctgccagcaagtactttcctccatttggtgtggc
aacctgaccagctggaggggcagcaggaccgcctggaagctgctggtgtccctggggatc
ttcctggccatgccccttctctgcctcgtgtactggatagcccccaagtcaaagattgga
aaaaccctgaaaattcctgtaatcaaattcctgctgcactccgcctcctatatgtggttc
ctcatcaccctgctgggggaatccatcagcatggaggtctaccgccaggactttgcctcc
cgcaagcagaacatcctgcacagctccctccacatggtctgggtggctggtttcttttgg
ttcgaatgtaaggaggtgtggattgagggcctgagaagctacttcctggactggtggaat
gttctggacatgatggtcctcagcatgtacctggcctctttcgccttgcgtgtcctcatc
atgctaaagggctacgtgctgtgccagggcttgggactgggctatggagaggagtgtgag
tacttcacccagacagagaggaatgagtggtggcaggaggacccccagttcatctcagag
gtgctgtttgcagtgaccagcatgctcagcttcactcgcctggcgtacatcctgcctgca
cacgagtccctgggaaccctgcagatatccattggcaagatgattgatgacatgatgagg
tttctgtttatcctgatgatcataggaacagccttcctctgtggagtcaacaacatctat
gtgccttatataatctctccacgtcttggccggttcaatgaaacgtttcacttcctgttc
tggaccatgtttggagtggccaatcagggctatgtggacatgccggagtttgtgctggcc
gagtttgtgggtaggatgctgtacgggatcttcacgctggtcatcgtcatcgtcctgctc
aacatgcttgtcgctatgatcaccaattcattccagaagattgaggatgctgccgatgtg
gagtggaagtttgcccgttcaaagctctacctgagttacttcncggaaggcctcactatg
cctgctcctttcaacatcctcccgtcaccaaaggccgccttctacctgataaggggtatt
ttccggaaactctgctgctgctgcaacttgaaccaagcacaggattatccccccattccc
tccatatctaacggagcacagagcgacggtggtggcgtcggggagagtcgctctccctac
cggctgcaggtgatcaaggcgctggtgcagcgctacatcgaaaccgcccggcgggagttt
gaggaaaccaaacgcaaagatgtggggaaccggatcacggagctgagcaaactgatgggg
aagctgcactctgagctgaagcagatgcaccaatcaatggggagcagcagtggcggggcc
aagggcggggactccgaggtgctgtcaaaatacatccagggggccaagaataacttccgg
gggttcaacaccacccacggggaggccccttcgttcgccatagcgctgcacaggaacagg
gtcgagggagcgaggaaggaggagggcaagagttctcatgataccggcctggagtcccag
ggagacctgagctccccggagaaagaaacagaggtgcaagaggagaaaaacacgggcaca
gaaaaaacaatgacacaggacggatcctga
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