Osmerus eperlanus (European smelt): 134016954
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Entry
134016954 CDS
T10927
Symbol
hdac4
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
134016954 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134016954 (hdac4)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
134016954 (hdac4)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
134016954 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
134016954
NCBI-ProteinID:
XP_062312183
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All DBs
Position
3:1547402..1588119
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AA seq
825 aa
AA seq
DB search
MGGPEASEPNLKLRSKLKQKVSERRSSPLLRRKEGPITSTKKRSLDTAESVCNSAPGSGP
SSPNNSSSNIPKENGMAVSCSHVEASLLHRLAGRDGPLSQLSLYTSPSLPNITLGLPATG
PASVVSGPQEGDSRLAMPGLQHSLPMSSPFLPGAHLPPYLASSPLERDGAGHNPLLKHMV
LLEQSHSPLVAGLGGLPPPSMAKLQRQHRPLGRNSRPPLPQSPQALQQLVVQQQHQQFLE
KHKQHFQQLHINKMMSKPSDPGAGAGPGVGAGPGRQHESHPEETEEELREHQAPQEGGRA
PQEGGLPRGRTIKQEPPDPHEEDRDQRERQADQERLFRQQALLLEQQRIHQLRNYQASLE
AAGLSITFPGHRPLSRAQSSPASASFPVVVQDPPTKPRFTTGLVYDSLMQKHQCMCGSTN
THPEHAGRIQSIWSRLQETGLRGKCECIRGRKATPEELQTVHSEAHVLLYGTNPLRQRLD
SSVTPMFVRLPCGGVGVDSDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRP
PGHHAEESTPMGFCYFNSVAIAAKLLQQRLSVDKILIVDWDVHHGNGTQQAFYSDPNILY
LSLHRYDDGNFFPGSGSPDEVGSGAGVGFNVNVAFTGGLEPPMGDAEYLAAFRAVVMPIA
NEFAPDVVLVSSGFDAVEGHNSPLGGYRLTAKCFGYLTRQLMGLAGGRVVLALEGGHDLT
AICDASEACVSALLGNELESLPEEVLTQRPNANAVVSMEKVLEAHGKYWHSLQRLASTLG
CSLSEARRCEAEEAEAVTAMASLSVASKHMGNRPEEEPMEEESPM
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaccagaggcatctgagcccaacctgaagctgcgctccaagctgaagcagaaa
gtgtccgagcgccggagcagccctctgctgaggaggaaggaggggcccatcacctccacg
aagaaacgctccctcgacacggccgagtctgtgtgtaacagcgcccctggttcaggcccc
agctcgcccaacaacagctccagcaacatccccaaggagaacggcatggctgtctcctgc
agccatgtggaggcctccctccttcacaggctggcggggagagacggccccctgagccag
ctctctctatacacatctccctccctgcccaacatcaccctggggctgcctgcgaccggc
ccagctagcgtggtgtcaggcccacaggagggtgatagcaggctggctatgccagggctc
caacacagcctccccatgtcctcccccttcctcccgggggcacacctgcccccctacctg
gcctcctcccccctggaacgagatggcgcaggacacaaccccctcctgaagcacatggtc
ctcctggagcagagtcacagtcccctggtggcaggtctgggaggcctgccccccccctcc
atggctaagctccagcggcagcaccgccccctgggccggaacagtcggccccccctgccc
cagagcccccaggctctgcagcagctggtggtgcagcagcagcaccagcagttcctggag
aaacacaagcagcacttccagcaactgcacatcaacaagatgatgtccaagcccagtgac
ccgggggcgggggcggggcctggtgtgggggcggggccaggccggcagcatgagagccac
ccggaggagactgaagaggagctgagggagcaccaggccccccaggagggaggccgggcc
ccccaggagggaggcctgccgcgggggcgcaccatcaaacaagagccccccgacccccac
gaggaggacagggaccagagggagagacaggccgatcaggagagactcttcagacagcag
gccctgctgttggagcaacagaggatccaccagctgaggaactaccaggcgtctctggag
gctgctggcctgtcaatcaccttcccagggcaccgccccctctccagggcccaatcatct
cccgcctccgcctccttccccgtcgtggtgcaagacccgcccaccaaacctcggttcacc
accggtctggtgtatgactccctcatgcagaagcaccagtgcatgtgcgggagcaccaac
acacacccggaacacgccggacgcatccagagcatctggtccaggctgcaggagactgga
ctccgggggaagtgtgagtgtatccggggcaggaaggctactccagaggagctccagacc
gttcactctgaggcccacgtcctgctgtacggaaccaaccctctcagacagagactagac
agttcggtgacccccatgtttgtgagactgccatgtggaggggtgggggtggacagtgac
accatctggaacgaggtccactcgtccagcgcagcgcgtctggccgtgggctccgtggtc
gagctggtcttcaaggtcgcttctggagagctcaagaatggttttgcggtggtccggccc
ccaggacaccacgcagaggaaagtacccccatgggcttctgttacttcaactctgtagcg
atcgcagccaaactgctccagcagaggttgagtgtcgacaagatcctgatagtggattgg
gatgttcaccatggcaacggcacccagcaagcattctacagcgaccccaacattctgtac
ctgtctcttcatcgctacgacgacggaaacttctttcctgggagcggatcacctgacgag
gtgggcagcggggcaggagtgggcttcaatgtgaacgtggccttcacaggaggactggag
cccccgatgggagacgcagaatacctcgctgccttcagggcagtggtgatgcccatagct
aatgagtttgctccagacgttgttctggtgtcgtcggggttcgacgccgtggagggccac
aactcacctctgggaggataccgcctcaccgccaagtgttttggctacctgaccaggcag
ctgatggggctggctgggggcagggtggtgctggcgctggagggaggtcacgacctcacg
gccatctgtgacgcctcggaagcctgtgtctctgctctgctggggaacgagctggagtcg
cttcctgaagaggttctgacccagaggccgaacgccaacgctgtcgtctccatggagaag
gttctggaagctcacggtaaatactggcactccttacagcgcctggcctccacgctgggc
tgctccctgagcgaggcccgcagatgtgaggcagaggaggcagaggccgtcaccgccatg
gcctcgctctccgtggccagcaagcacatgggcaacaggccggaggaggagcctatggag
gaggagtctcccatgtag
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