Osmerus eperlanus (European smelt): 134017107
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Entry
134017107 CDS
T10927
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134017107
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
URGCP_GTPase
MMR_HSR1
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
134017107
NCBI-ProteinID:
XP_062312414
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All DBs
Position
3:complement(2364864..2371517)
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AA seq
669 aa
AA seq
DB search
MDSPKCLIENVDGVLRPVPDAIDHLMKIRQRVVVVAVVGLYRTGKSYLMNKLAGRKDGFA
LGDTIQSKTKGIWMWCVPHPKQADLTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVTELTERIKVKSSSNASSSEDEEEGVDAQFVQFFPNFVWAVR
DFTLQLRIDNRDVTADQYLEHSLELKKGTDRRVMNFNLPRACIRNYFPTRKCFVFQTPAS
PENMVRLESMDERELCQGFRETTDTFCNYIFQMSRVKTVKGGQGVTGRMLGHLVKMYVET
IARGEVPCLENVVLAMAQIENQAAVEEGLKLYQSCMEPLKTRFPVDMDQMSDQHQRADQQ
ATQEFMNRSFKDGNGEFLTMLANGIAKNYAELLIQNDDASEKKCQGLLRDLSTPVSQKIQ
EGFFATPGGYELYCDLHDKLVAQYRSTPNKGIRAEEVLERFLKEKSVESNSILQADQKLT
DSEKMIHEERERAAVAEQEVKVEQEKRLQLERESEERERSYQESVTQMEAKMELEANQMK
WEMERALESKLEEQKKLHERGFLEKETDMKEEITALRHKMEEAKSEREDKASYREMMGTL
MHSIGDGLGHYFNYKQAREKRKAIQSKTLLSSRPRGVKAGVPDTQKGLPNPGTRDQTQAK
SGGSSGSEV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggattcaccaaagtgcctgatcgaaaacgtggatggtgtgcttcgacctgtcccagat
gccatcgaccaccttatgaagatccgtcagcgcgtcgtcgtagtggcggtggtcgggttg
taccgcaccggcaagtcttacctcatgaacaagctggctggcaggaaagacggatttgct
cttggagacaccatacaatccaagactaagggcatctggatgtggtgtgtgcctcatcct
aaacaagctgacctcactctggtgctgctggacacagagggactaggggacgtagagaag
ggagattcgaagaacgatgcctggattttctccctggctattctgctcagcagcactctg
gtctataacagtcgagggaccatagacaaccaggctgtggagaacctccaatatgtgact
gagttgactgagagaatcaaggtgaagtcctccagcaatgcttcatccagtgaggatgag
gaggagggagtcgatgcccagtttgtccaattctttcctaactttgtgtgggcagtgaga
gatttcactctgcaactaagaattgataacagagatgtgactgcagatcagtacctggag
cactctctggaactcaagaaaggtactgacaggagggttatgaactttaacctcccgcga
gcgtgcatccgcaattacttcccaacgcgcaagtgcttcgtgttccagacccctgcttcc
cctgagaacatggttcgactggagtccatggatgagagggagctctgccaaggcttcagg
gagaccacagacactttctgcaactacatttttcagatgagccgtgtgaaaaccgtcaaa
gggggtcaaggagttactggtagaatgcttggccacttggtcaaaatgtatgtggagacc
attgctcggggcgaagttccttgtctggagaacgtggtgctggccatggcccagatagag
aaccaggcagcggtggaggaggggctgaagctgtaccagagctgcatggagccgctgaag
acccggttcccagtggacatggaccagatgtcagatcaacaccaacgtgctgaccagcag
gccacccaagagttcatgaaccgttccttcaaagacggaaatggggaattcttgacaatg
ctggcgaatggtattgcaaagaactatgctgaacttcttatccaaaatgatgacgcctca
gagaagaagtgtcagggtctgctgagggatctctccactccggtctcacagaagatccag
gaagggttctttgccacaccaggtggctacgagctgtactgtgatctccacgacaaatta
gtggcacagtatcgttccacacctaacaaaggaatccgggctgaggaggttctggagcgg
ttcctgaaggagaagagtgttgagtccaactccatcttacaagctgaccagaaacttact
gacagcgagaagatgatccatgaggagagagagagggcggcagtggccgagcaggaagtg
aaggtggagcaggagaaacgcctgcagctggagagggagagcgaggagagagagaggagt
taccaggagagtgtgactcagatggaggctaaaatggagctggaggcaaatcagatgaag
tgggagatggagcgagccctggagagcaaactggaggagcagaagaagcttcacgagaga
ggcttcttggagaaggagacggacatgaaggaggagatcaccgcactgaggcacaagatg
gaggaggccaaaagcgagagggaagataaggcttcctatcgagaaatgatgggaaccctc
atgcatagtatcggtgatggtttgggtcattactttaactacaaacaggcccgtgagaaa
cgcaaggcaatacagagtaagactctactgtcctcccggcccagaggtgtgaaggctggt
gtccctgacacccagaaagggctccctaacccagggacgagagaccagacacaagccaag
tctggggggagctctgggtcagaggtgtga
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