Osmerus eperlanus (European smelt): 134017122
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Entry
134017122 CDS
T10927
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134017122
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Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
URGCP_GTPase
MMR_HSR1
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
134017122
NCBI-ProteinID:
XP_062312452
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Position
3:2624476..2628185
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AA seq
593 aa
AA seq
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MDSPKCLIDNVDGVLRPVPDAIDHLMKIRQRVVVVAVVGLYRTGKSYLMNKLAGRNDGFA
LGSTIQSKTKGIWMWCVPHPKQADHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVTELSERIKVKSPSDASSSEEEEEEGGDAQFVQFFPNFVWAV
RDFTLDLKIDGKDVTADGYLAHSLELKKGKDKKTMNYNLPRECIRNYFPTRKCFVFPIPT
SSANMSRLESIDEKELYQGFRETTDTFCNYIFQMSHVKTVKGGVVVTGRMLGHLVKMYVE
TISQGGVPCLENVVLAVAQIENQAAVEEGLKLYQSCMEPLKTRFPVDMDQMSDQHQRADQ
QATQEFMNRSFKDENGEYLKTLGNGIKKHYEELLTQNEEASEKKCQDLLRDLSAPVSQKI
QDGFFAKPGGYELYCDLHDNLVALYRSTPNKGIRAEEVLERFLKEKSVESNSILQADQKL
TDSEKKIHEEKEKAALLEQEKKATEKKYEEMELKMEDDRRSQEEKMKKMEQKMKEEFRQQ
QEEFNRALDRKLKEQKDLLEQGHKQKADLMRMEIEAFKRNNRPPPPGPGCVIL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggattcaccaaagtgcctgatcgacaacgtggatggtgtgcttcgacctgtcccagat
gccatcgaccaccttatgaagatccgtcagcgcgtcgtcgtagtggcggtggtcgggttg
taccgcaccggcaagtcttacctcatgaacaagctggctggcaggaacgacggatttgcc
ctgggatccaccatacagtccaagactaagggcatctggatgtggtgtgtgcctcatcct
aaacaagctgaccacactctggtgctgctggacacagagggactaggggatgtagagaag
ggagattccaagaacgatgcctggattttctccctggctattctgctcagcagcactctg
gtctataacagtcgagggaccatagacaaccaggctgtggagaacctccaatatgtgact
gagctgtcagagagaatcaaggtgaagtcccccagcgatgcttcatccagtgaggaggag
gaggaggagggaggggatgcccagtttgtccagttctttcctaactttgtctgggcagtc
agagatttcactctggacctcaaaattgatggtaaagacgtgactgcggatgggtatctg
gcgcactctctggaactcaagaaaggtaaggacaagaagaccatgaactacaacctcccg
cgagagtgcatccgcaattacttccccacacgcaagtgctttgtgttcccgatccctact
tcctctgcaaacatgtcccgactggagtccatagatgagaaggaactctaccaaggcttc
agggagaccacagacactttctgcaactacatttttcagatgagccacgtgaaaactgtc
aaagggggcgtagtagttactggtagaatgcttggccacttggtcaaaatgtatgtggag
accatctcccagggtggagttccctgtctggagaacgtggtgctggccgtggcccagata
gagaaccaggcagcggtggaggaggggctgaagctgtaccagagctgcatggagccgctg
aagacccggttcccagtggacatggaccagatgtcagatcaacaccaacgcgctgaccag
caggccacccaagagttcatgaaccgttccttcaaagatgaaaatggggaatacttgaaa
accctggggaatggtattaaaaagcactacgaggaacttctaacccaaaatgaagaagct
tcagagaagaagtgtcaggatctgctgagggatctctccgctccggtctcacagaagatc
caggacgggttctttgccaaaccaggtggctacgagctttactgtgatctccatgacaac
ttggtggcattgtatcgttccacacccaacaaaggaatccgggctgaggaggttctggag
cggttcctgaaggagaagagtgttgagtccaactccatcttacaagctgaccagaaactt
actgacagcgagaagaagatccatgaggagaaggagaaagctgctttgctggagcaggag
aagaaagctacagagaagaaatatgaagagatggagctcaaaatggaggacgatcgcagg
agccaggaggagaagatgaagaagatggagcagaaaatgaaggaggagtttaggcaacag
caggaggagttcaacagggctctagatcgcaagctcaaggagcagaaggatcttctggag
cagggtcacaagcagaaggctgacttgatgaggatggaaatcgaggccttcaaaaggaac
aacaggccacctccccctggtccaggctgtgtaattctctaa
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