Osmerus eperlanus (European smelt): 134017161
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Entry
134017161 CDS
T10927
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
134017161
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Gene cluster
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Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
URGCP_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
134017161
NCBI-ProteinID:
XP_062312502
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Position
3:complement(2895320..2903322)
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AA seq
600 aa
AA seq
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MDSPMCLIDNVDGVIRPVPDAINHLMKIRQRVVVVAVVGLYRTGKSYLMNKLAGRNDGFA
LGSTIQSKTKGIWMWCVPHPKQADLTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVTELSDRIKVKSPSHASSSKEDEEEGGDAQFVQFFPNFVWAV
RDFTLDLKIDGKDVTADGYLEHSLELKKGKGKTTTNYNLPRECIRNYFPTRKCFVFLPPT
SYEHMSRLEFIDEKELYQGFRETTDTFCNYIFQMSHVKTVKGGVEVTGRRLGHLVKMYVE
TISQGGVPCLENVVLAMAQIENQAAVEEGLKLYQSCMEPLKTRFPVDMDQMSDQHQRADQ
QATQEFMNRSFKDGNGDFLKMLATGITKHYEELLTQNGEASEKKCQYLLSKLSAVVAQKI
QDGFFAKPGGYGLYCDLHDNLVALYRCTPSKGIRAEEVLERFLNEKNVESHSILQADQKL
TDSEKRIHEEKERAALLEQEKKAAEEKHEEMELKMEDARWSHEDKMWRMEEKMKEEFRQQ
QEELNRALDHKMKLHKALLEQGCKEKADLMRMEIEHDQQIKNMRKEIDYLKSHKFDCIIA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggattcaccaatgtgcctcatcgacaacgtagatggtgtgattcgacctgtcccagat
gccatcaaccaccttatgaagatccgtcagcgtgtcgtagtagtggcagtggtcgggttg
taccgcaccggcaagtcttacctcatgaacaagctggctggcaggaacgacggatttgcc
ctgggatccaccatacagtccaagactaagggcatctggatgtggtgtgtgcctcatcct
aaacaagctgacctcactctggtgctgctggacacagagggactaggggacgtagagaag
ggagattccaagaacgatgcctggattttctccctggctattctgctcagcagcactctg
gtctataacagtcgagggaccatagacaaccaggctgtggagaacctccaatatgtgact
gagctgtcggacagaatcaaggtgaagtcccccagccatgcttcatccagtaaggaggat
gaggaggagggaggggatgcccagtttgtccagttctttcctaactttgtctgggcagtc
agagattttactctggacctcaaaattgatggtaaagacgtgactgcggatgggtatctg
gagcactctctggaactcaagaaaggtaagggcaagacgaccactaactacaacctcccg
cgagagtgcatccgcaactacttccccacacgcaagtgttttgtgttcctgccccctact
tcctatgaacacatgtcccgactggagttcatagatgagaaggaactctaccaaggtttc
agggagaccacagacactttctgcaactacattttccagatgagccatgtaaaaactgtc
aaagggggcgtagaagttactggaagaaggcttggccacttggtcaaaatgtacgtagag
accatctcccagggcggagttccctgtctggagaacgtggtgctggccatggcccagata
gagaaccaggcagcggtggaggaggggctgaagctgtaccagagctgcatggagccgctg
aagacccggttcccagtggacatggaccagatgtcagatcaacaccaacgcgctgaccag
caggccacccaagagttcatgaaccgttccttcaaagacggaaatggggatttcttgaaa
atgctggcgactggtattactaagcactacgaggaacttctaacccaaaacggggaagcc
tcagagaagaagtgtcagtatctgctgagtaaactctccgctgtggtcgcacagaagatc
caggacgggttctttgccaaaccaggtggctacgggctttactgtgatctccacgataac
ttggtggcattgtatcgttgcacacctagcaaaggaatccgggctgaggaggttctggag
cggttcctgaatgagaagaatgttgagtcccactccatcttacaagctgaccagaaactt
actgacagcgagaagaggatccatgaggagaaggagagagctgctttgctggagcaggag
aagaaggctgcagaggagaaacatgaagagatggagctcaaaatggaggacgctcgctgg
agccatgaggacaagatgtggaggatggaggagaaaatgaaggaggaatttaggcaacag
caggaagagttaaacagggctctagatcataaaatgaagttgcataaggctcttctggag
cagggttgcaaggagaaggctgacttgatgaggatggagatagagcatgatcagcagata
aagaatatgagaaaggaaattgattacttgaaaagtcacaaatttgactgtattattgcc
taa
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