Osmerus eperlanus (European smelt): 134017251
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Entry
134017251 CDS
T10927
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134017251
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Protocadherins
134017251
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
134017251
NCBI-ProteinID:
XP_062312666
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All DBs
Position
3:complement(4773156..4784354)
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AA seq
1093 aa
AA seq
DB search
MRLSVIFFLFLWAKALTLKNLNYSVPEEQGPGTVIGNIAKDAGYGPMERGKKSNFRILEN
SAPHLVDVDPESGLLFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKIDIEDINDNS
PSFPSDHINIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKIRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKPSYV
LEIPENSPPGKILIDLNATDQDEGSNGQVVYSFSGYASERMQELFSIDPNTGVIKIQGEI
DYEENPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNWPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREMKDEYNITIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTVYVLQVPENNIPGEYLGSVLAHDPDIGRN
GTVSYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKFFEFKVQAKDAGSPHMES
TATVRVSVLDVNDNLPVITLPLLQNDTAEIVVPRNVGMGYIVTTVKAMDHDHGESGRLTY
EIWEGNEDNLFEIDPVSGEIRTINPVWEAVTTLVELVVKVTDHGKPPLSAVAKLIIRANP
GAIAAGDSGAIREPQPWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKEAGNYNCRTA
EFANPPMGKGKKKRINKSDIMLVQSEMEERDSLSRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVLYLKTTPNSLTVPRAGCHSSFAGLSTETPGNRMSVIQTDNFPSEPNYVGSRQPF
VPSSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKATAVNGQPLEQ
GQDKSVHCTDECLALGHSDSCWMPKLRVGSQADSADNRTNLFIPVGMEAMVETEIYGTIN
RSGRKTLSTFGKEQRDSTILVANVKPYFKTQRALSPPLQESPSVSSSPTKMSTPLDSPSK
EPGQGREGGSDSSAYGPPDGQCSPPHTELEEPSYLTCQVLRPKSLSSSLIHSSVISQECG
AMEYVFDQRDSAN
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctttctgtcatatttttccttttcttgtgggctaaagccctgacattgaaaaat
ctaaattattctgtcccggaagagcaaggacctggcactgtaataggtaacatagccaag
gatgccggatatggaccgatggaaagggggaaaaaatcaaactttaggatattggagaat
tccgctccacatctggtagatgtggacccggagagtgggctgctcttcactaaacaacgg
attgacagggagacattgtgcaggcgcaaccccaaatgtcagctctctatggaagtgttt
gccaacgacaaggaaatatgcatgatcaagattgatatagaggacatcaacgacaattca
ccaagttttccttcagatcacatcaatattgatatttcagaaaatgcagcagctggcacg
cgatttcccctaacaattgcgcacgactcagattctggggaaaacgggattaagacttat
caggtcacaagagatgattacaatacattttctttggatttgaaaattagaggagatggg
actatatatccagaactcgtcgttcagagaccattagacagggaggaccagagtcatcac
acactccttttgacagctattgatggaggggaatatccaagatcagggtccatgcaaata
aatgtgagagttactgattcaaatgataacagcccagtctttgaaaaaccctcctatgtc
ctggagatccctgaaaactcaccacctggaaaaatattgatagatttaaatgcaacagac
caagacgaaggcagcaatgggcaggtggtctattccttcagtgggtatgcatcagagcga
atgcaggagttgttctccattgaccccaacactggtgtcataaagattcaaggagaaata
gactatgaggagaacccaattattgaatttgatgtgcaggctaaggacctcgggccaaac
cccattcctggccattgtaaaatcactgtcaaagtactagacaagaatgataactggcca
attataagttttgtgtctgtccgtcagggagccatcagcgaagcagcccctccagaatct
gtcattgctctggtgagagtcacagacaaagactctgggaggaatggtcaactccagtgc
agagtgctgggaaatgtacccttcagattgcaagaaaacaatgataatttttacactctt
ctaactgatagaccgctggacagggaaatgaaagatgaatataacattacaatagtggcc
agggacaatggaataccttccttaaattacacaaaatcctttacggtcaaaatattggat
gaaaatgacaatgcacctcgttttaccaagacagtatatgtgcttcaggtgccagagaac
aacatcccaggggagtatttaggttctgttctggctcatgatcccgacataggtagaaat
ggaaccgtgtcttattccatcttgccttcacatattggggatgtgtcagtctatacctat
gtgtccgtcaatcctaccaatggagccatatacgcctcgagatctttcaactacgagcaa
acgaagttctttgagttcaaagttcaagctaaagatgcagggtctcctcacatggagagc
accgccacagtcagggtcagtgtcctagacgtcaacgacaatctcccagtaatcacacta
cccctccttcaaaacgacacggctgaaatcgttgtcccccgaaacgtgggcatgggctac
atcgtgaccacggtcaaagccatggaccacgaccacggggagagcggtcgcctgacctac
gagatctgggagggcaacgaggataacctgtttgagattgaccccgtgtctggggagatc
cgaacaatcaacccagtgtgggaggcggtgaccaccttggtggagctggttgtgaaggta
acagaccatggcaagcctcccctgtctgctgtggctaagttgatcattagggccaacccg
ggagccatagcagcaggggactcaggtgccatcagggagccacaaccatgggacgtgtcc
ctgcccctcatagttaccctgtgcatcatctctgtcatgctgctggccgtcatgaccgcc
atcgccgtcaagtccaaacatcaggataaggaggccgggaattacaactgccgcacggca
gagttcgccaaccctccgatgggcaaggggaagaagaagaggatcaacaagagtgacatc
atgctggtgcagagcgagatggaggagagggactcgttgagcaggatgaacgtggtgagc
agtccctccctcatcacctcgcccatctgctttgattaccagagccccttgcccctcact
ctgcccagatctgaggtcctgtacttgaagaccaccccaaacagcttgactgtccctcgg
gctggatgccactcgagctttgctggactcagcacagaaactccagggaacaggatgtca
gtgatacagacagataattttccctccgagcccaattatgtaggcagcaggcagcctttt
gttccaagcagctccacatttaaggatgcagagcgagcaagcctccgagacagtggccat
ggtgatagtgaccaggctgatagtgaccaggatactaataaaggctcacactgcgacacg
tctgccagggaggccctcaagatgaaagcaacagcagttaatggccagcctctcgaacag
gggcaagacaaatcagtccactgcacagatgaatgtcttgcactgggacattctgacagc
tgttggatgccaaagttacgggtaggaagccaagcagacagcgccgataatcgcaccaac
cttttcatccctgtgggaatggaggccatggtggagacagagatttatggcaccatcaac
cgcagcggcagaaaaaccctcagcacgtttgggaaagaacagcgggacagtaccatcctc
gtggccaatgtcaagccctactttaaaacccagcgtgctctcagcccaccgctgcaggag
agcccttctgtgtccagtagccccaccaagatgagcacccccctggactcccccagcaag
gagcccggacaggggagggaggggggctcggacagcagtgcctacggaccgccggatggc
cagtgttccccgccgcacacagaactggaggagccctcctacctgacctgccaggtcctc
aggcccaagtctctgtccagcagccttatccacagctctgtcatcagccaggagtgtggc
gccatggagtacgttttcgaccagcgggactctgccaactga
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