KEGG   Osmerus eperlanus (European smelt): 134017252
Entry
134017252         CDS       T10927                                 
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
  KO
K16499  protocadherin delta 2
Organism
oep  Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:oep00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oep04515]
    134017252 (si:ch211-199f5.1)
Cell adhesion molecules [BR:oep04515]
 Cadherins
  Protocadherins
   134017252 (si:ch211-199f5.1)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_CELSR2_9th TMEM154
Other DBs
NCBI-GeneID: 134017252
NCBI-ProteinID: XP_062312667
LinkDB
Position
3:4812866..4816634
AA seq 979 aa
MIRVILTFWHRRMFVFTILQILFVSLVGSEGNTLTYETNEEDGPGTIIGNLAKDMSLSLA
FSSKTNFRMMKQFNNSFIRVRENDGELTVGERIDREIICRHTLQCFITFDVVSFSKDRYK
LIHVEVEVKDINDNSPEFPNKESTVEISENAALGSRIPLDPAEDADVGSNYIQSYQISVN
SHFSIDVLLRADGVKYAELVLMKELDRETQSFYMVELVATDGGNPIRSGSTKITIKVTDF
NDNSPVFDQNNFSVSLSEDAPIGFVLLDLHAVDPDDGLNGEVTYGFGKQVSYEIRELFEV
DNKSGRLILKSPVDYESKKTYELDVQATDLGPNPTPSVCKIIIHVKDVNDNTPEISITPM
TSITTGIAFISEAADKDSLVALISTLDRDSGVNSQVHCTLYGHDHFKLQQAYEDSYMIVT
AAALDREKISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPRFSKPVYEVSVPENNA
PGAYITTVEARDADLGNNGKITYRLLDSVIMGSPMNTFVSLNAVSGSIYALRSFNYEVMK
QLDLHIQASDGGSPQLQSSAVIKLKIADQNDNPPFITEPVLNKGSAEVFLPKKSPAGYVV
TQIKATDADEGTNAQLSFKIVEGGHLGFSINRATGKMYVSRELAYDITASLKVVAAVSDS
GTPALSSTATIHFTLIEGTPSSVPSEVPNETEELFEWDMSVAIIIVLAGSCSLLLLAIIL
ITTTCSRRKRDKREGGYEDKEDVPNVEKGDNSPIDSLITSHNSNVFDVQSFPEKSPLANA
NTMKKDSEEGRQAASIFEPNNRRMDGKLEGYSTLPGYGKETIRPITIWKGNSFTTICARD
PQFSGKDSGKGDSDFNDSDSDISGDGHKKDSPPINSLWACTNECKILGHSDRCWSPSATR
PNTSLSQGLHLSTFSKTASLPRDSRRENYYPAHLPKTNGLQSVYEKVQNQEFDYILVGPP
TPARIPETDELSISEYSHS
NT seq 2940 nt   +upstreamnt  +downstreamnt
atgatacgagtcattttaaccttttggcatcggaggatgtttgttttcacgattttacaa
atattgttcgtctccctggttgggtcggagggaaatactctgacatacgaaaccaatgag
gaggatgggccgggcacaatcatcgggaacctggccaaggacatgtccttgagtctggct
tttagctctaagaccaatttcaggatgatgaaacaattcaacaattcctttatccgggta
agagaaaacgatggggagcttactgtcggggagcgaatagaccgagaaattatctgcagg
catactttacagtgttttatcacttttgatgtggtcagtttttcaaaagaccgttacaaa
ttgatccatgttgaagtggaagtgaaggatattaatgataactctccagagtttccaaac
aaggaatctacagtggagatctccgaaaacgcagcattagggtcccgtattcctttagac
cctgccgaagacgcggatgtgggatcaaactatatacaaagctatcaaatatctgtcaac
agtcatttttccattgatgtgcttctaagagcggatggggttaaatatgcggagttggtg
ctaatgaaagagctagacagagagactcagtcattttacatggtcgagcttgttgccacg
gatggagggaacccaattaggtctggatccacaaagataactatcaaagtgactgacttt
aatgacaacagtcccgttttcgaccagaataatttctcggtcagtttgtccgaggatgcc
ccgattggatttgtgttattggacttacacgccgttgatcctgatgacggtctaaatgga
gaagtcacctatggatttggaaaacaggtttcgtatgagattcgagaactttttgaagtg
gataataaatctggtcgcttgatacttaagagcccagtcgattatgaaagcaagaaaaca
tacgagttagatgtgcaagcgactgatcttggacctaaccctaccccctccgtctgtaaa
atcattattcatgtaaaagacgttaatgacaataccccagaaatcagtattaccccaatg
acctccatcacaacaggcattgcattcatcagtgaggcagcagacaaggacagtctagtg
gcgctgatcagcaccttggacagggactcgggcgtcaacagtcaggttcactgtaccttg
tatggccacgaccatttcaaactccagcaggcttacgaggacagctacatgattgtaaca
gctgcagctctggacagagagaaaataagcgagtacaatttaacagtgatggctgaggat
tttgggtcacccccgctgagaaaaataacacaatacactattcggttgagcgatgagaac
gacaacgcccctcgttttagtaaacccgtctacgaagtttctgttccagagaacaatgcc
ccaggcgcatatataaccacagtagaggccagggacgcggacctgggcaacaatggcaaa
attacctacaggcttttagacagcgttataatgggatctcccatgaacacgtttgtatca
ctcaacgcagtgtctgggtcaatatatgcactgcgaagtttcaactatgaagtcatgaaa
caactggatttgcacatccaagcaagtgatggggggtcacctcagcttcagagcagcgca
gtcatcaagctaaaaatagcggatcagaatgacaacccaccgtttatcacggaaccggtc
cttaacaaaggctctgctgaggttttcctgcccaaaaaatcacctgcaggttatgttgta
acccagataaaggccacagacgccgatgaaggcacaaacgcacagctctccttcaaaata
gtcgagggcggacacctggggttctccatcaacagagccacggggaagatgtacgtgagc
cgcgagctggcctacgacatcacggccagtctgaaagtcgtggccgctgtcagtgacagt
ggaacgcctgccttgtcctccacggcaaccatacatttcaccctcatcgaaggcactccc
tccagtgtgccctccgaggttcccaatgagacagaggagctgtttgagtgggacatgtcc
gtagccattatcatcgtcctggcagggagctgctctctgcttctcctcgccatcatcctc
atcacaaccacttgtagtcgacgcaaaagagacaagagagagggaggctacgaggacaaa
gaagacgtgccaaacgtggagaagggggacaacagccctattgattcattgatcaccagc
cacaatagcaatgtgtttgacgttcagtcgttcccagagaaatccccgctggccaacgcc
aacacaatgaagaaagactctgaggaggggagacaagcagcgagcatctttgagcctaac
aataggcgaatggatggtaaattggagggttattccacactgccgggatatgggaaagag
acaatcagacccataacaatatggaagggcaattcatttacaacaatctgtgcaagagac
cctcagttcagtggcaaggacagtgggaaaggagacagtgacttcaatgatagtgattct
gacataagtggagatggccacaaaaaagactctccaccaatcaacagtctttgggcttgc
actaatgagtgtaagatcctgggtcactctgaccgttgctggagtccctctgccaccaga
cctaacacaagcctctcccagggactccacctctccaccttctctaagacagcctcactg
cccagggacagtcgcagagaaaactactatccagcacacctacccaaaacaaatggtcta
caaagtgtttatgaaaaagtacaaaatcaagagtttgattatattcttgttggcccaccg
acacctgccagaataccagagactgatgagctttccatttcagagtattcacactcttaa

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