Osmerus eperlanus (European smelt): 134017252
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Entry
134017252 CDS
T10927
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134017252 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
oep04515
]
Cadherins
Protocadherins
134017252 (si:ch211-199f5.1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
134017252
NCBI-ProteinID:
XP_062312667
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All DBs
Position
3:4812866..4816634
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AA seq
979 aa
AA seq
DB search
MIRVILTFWHRRMFVFTILQILFVSLVGSEGNTLTYETNEEDGPGTIIGNLAKDMSLSLA
FSSKTNFRMMKQFNNSFIRVRENDGELTVGERIDREIICRHTLQCFITFDVVSFSKDRYK
LIHVEVEVKDINDNSPEFPNKESTVEISENAALGSRIPLDPAEDADVGSNYIQSYQISVN
SHFSIDVLLRADGVKYAELVLMKELDRETQSFYMVELVATDGGNPIRSGSTKITIKVTDF
NDNSPVFDQNNFSVSLSEDAPIGFVLLDLHAVDPDDGLNGEVTYGFGKQVSYEIRELFEV
DNKSGRLILKSPVDYESKKTYELDVQATDLGPNPTPSVCKIIIHVKDVNDNTPEISITPM
TSITTGIAFISEAADKDSLVALISTLDRDSGVNSQVHCTLYGHDHFKLQQAYEDSYMIVT
AAALDREKISEYNLTVMAEDFGSPPLRKITQYTIRLSDENDNAPRFSKPVYEVSVPENNA
PGAYITTVEARDADLGNNGKITYRLLDSVIMGSPMNTFVSLNAVSGSIYALRSFNYEVMK
QLDLHIQASDGGSPQLQSSAVIKLKIADQNDNPPFITEPVLNKGSAEVFLPKKSPAGYVV
TQIKATDADEGTNAQLSFKIVEGGHLGFSINRATGKMYVSRELAYDITASLKVVAAVSDS
GTPALSSTATIHFTLIEGTPSSVPSEVPNETEELFEWDMSVAIIIVLAGSCSLLLLAIIL
ITTTCSRRKRDKREGGYEDKEDVPNVEKGDNSPIDSLITSHNSNVFDVQSFPEKSPLANA
NTMKKDSEEGRQAASIFEPNNRRMDGKLEGYSTLPGYGKETIRPITIWKGNSFTTICARD
PQFSGKDSGKGDSDFNDSDSDISGDGHKKDSPPINSLWACTNECKILGHSDRCWSPSATR
PNTSLSQGLHLSTFSKTASLPRDSRRENYYPAHLPKTNGLQSVYEKVQNQEFDYILVGPP
TPARIPETDELSISEYSHS
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgatacgagtcattttaaccttttggcatcggaggatgtttgttttcacgattttacaa
atattgttcgtctccctggttgggtcggagggaaatactctgacatacgaaaccaatgag
gaggatgggccgggcacaatcatcgggaacctggccaaggacatgtccttgagtctggct
tttagctctaagaccaatttcaggatgatgaaacaattcaacaattcctttatccgggta
agagaaaacgatggggagcttactgtcggggagcgaatagaccgagaaattatctgcagg
catactttacagtgttttatcacttttgatgtggtcagtttttcaaaagaccgttacaaa
ttgatccatgttgaagtggaagtgaaggatattaatgataactctccagagtttccaaac
aaggaatctacagtggagatctccgaaaacgcagcattagggtcccgtattcctttagac
cctgccgaagacgcggatgtgggatcaaactatatacaaagctatcaaatatctgtcaac
agtcatttttccattgatgtgcttctaagagcggatggggttaaatatgcggagttggtg
ctaatgaaagagctagacagagagactcagtcattttacatggtcgagcttgttgccacg
gatggagggaacccaattaggtctggatccacaaagataactatcaaagtgactgacttt
aatgacaacagtcccgttttcgaccagaataatttctcggtcagtttgtccgaggatgcc
ccgattggatttgtgttattggacttacacgccgttgatcctgatgacggtctaaatgga
gaagtcacctatggatttggaaaacaggtttcgtatgagattcgagaactttttgaagtg
gataataaatctggtcgcttgatacttaagagcccagtcgattatgaaagcaagaaaaca
tacgagttagatgtgcaagcgactgatcttggacctaaccctaccccctccgtctgtaaa
atcattattcatgtaaaagacgttaatgacaataccccagaaatcagtattaccccaatg
acctccatcacaacaggcattgcattcatcagtgaggcagcagacaaggacagtctagtg
gcgctgatcagcaccttggacagggactcgggcgtcaacagtcaggttcactgtaccttg
tatggccacgaccatttcaaactccagcaggcttacgaggacagctacatgattgtaaca
gctgcagctctggacagagagaaaataagcgagtacaatttaacagtgatggctgaggat
tttgggtcacccccgctgagaaaaataacacaatacactattcggttgagcgatgagaac
gacaacgcccctcgttttagtaaacccgtctacgaagtttctgttccagagaacaatgcc
ccaggcgcatatataaccacagtagaggccagggacgcggacctgggcaacaatggcaaa
attacctacaggcttttagacagcgttataatgggatctcccatgaacacgtttgtatca
ctcaacgcagtgtctgggtcaatatatgcactgcgaagtttcaactatgaagtcatgaaa
caactggatttgcacatccaagcaagtgatggggggtcacctcagcttcagagcagcgca
gtcatcaagctaaaaatagcggatcagaatgacaacccaccgtttatcacggaaccggtc
cttaacaaaggctctgctgaggttttcctgcccaaaaaatcacctgcaggttatgttgta
acccagataaaggccacagacgccgatgaaggcacaaacgcacagctctccttcaaaata
gtcgagggcggacacctggggttctccatcaacagagccacggggaagatgtacgtgagc
cgcgagctggcctacgacatcacggccagtctgaaagtcgtggccgctgtcagtgacagt
ggaacgcctgccttgtcctccacggcaaccatacatttcaccctcatcgaaggcactccc
tccagtgtgccctccgaggttcccaatgagacagaggagctgtttgagtgggacatgtcc
gtagccattatcatcgtcctggcagggagctgctctctgcttctcctcgccatcatcctc
atcacaaccacttgtagtcgacgcaaaagagacaagagagagggaggctacgaggacaaa
gaagacgtgccaaacgtggagaagggggacaacagccctattgattcattgatcaccagc
cacaatagcaatgtgtttgacgttcagtcgttcccagagaaatccccgctggccaacgcc
aacacaatgaagaaagactctgaggaggggagacaagcagcgagcatctttgagcctaac
aataggcgaatggatggtaaattggagggttattccacactgccgggatatgggaaagag
acaatcagacccataacaatatggaagggcaattcatttacaacaatctgtgcaagagac
cctcagttcagtggcaaggacagtgggaaaggagacagtgacttcaatgatagtgattct
gacataagtggagatggccacaaaaaagactctccaccaatcaacagtctttgggcttgc
actaatgagtgtaagatcctgggtcactctgaccgttgctggagtccctctgccaccaga
cctaacacaagcctctcccagggactccacctctccaccttctctaagacagcctcactg
cccagggacagtcgcagagaaaactactatccagcacacctacccaaaacaaatggtcta
caaagtgtttatgaaaaagtacaaaatcaagagtttgattatattcttgttggcccaccg
acacctgccagaataccagagactgatgagctttccatttcagagtattcacactcttaa
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