Osmerus eperlanus (European smelt): 134017346
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Entry
134017346 CDS
T10927
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134017346 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oep03019
]
134017346 (hspd1)
03110 Chaperones and folding catalysts [BR:
oep03110
]
134017346 (hspd1)
03029 Mitochondrial biogenesis [BR:
oep03029
]
134017346 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oep04147
]
134017346 (hspd1)
Enzymes [BR:
oep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
134017346 (hspd1)
Messenger RNA biogenesis [BR:
oep03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
134017346 (hspd1)
Chaperones and folding catalysts [BR:
oep03110
]
Heat shock proteins
HSP60 / Chaperonin
134017346 (hspd1)
Mitochondrial biogenesis [BR:
oep03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
134017346 (hspd1)
Exosome [BR:
oep04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134017346 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
134017346 (hspd1)
Exosomal proteins of breast cancer cells
134017346 (hspd1)
Exosomal proteins of colorectal cancer cells
134017346 (hspd1)
Exosomal proteins of bladder cancer cells
134017346 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
134017346
NCBI-ProteinID:
XP_062312845
LinkDB
All DBs
Position
3:7074177..7079662
Genome browser
AA seq
579 aa
AA seq
DB search
MLRLSTVLKQMRPVSRALAPHLTRSYAKDVKFGADARALMLQGVDLLTDAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIELKNKFQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRLSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLHDMAIATGGTVFGDEAVGVALEDIQAHDFGQVGEVLVTKDDTMLLKG
RGDAALIEKRSQEIAELLESSTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPALDNIKPANEDQKIGLEIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGGPELGYDALIGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTELPKEEKEMPGGGGMGGMGGMGGMGGMGGGMF
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctatcaacagtgctgaaacagatgaggccggtgtccagggcactggccccc
cacctcacacgctcctacgccaaggacgtgaagtttggagctgatgcccgggctctcatg
ctgcaaggagtggacctgctgacagatgctgtcgctgtcactatgggacccaagggtcga
actgtcatcattgagcagagttggggcagccccaaggttactaaagatggcgtgactgtt
gccaagagcattgagctgaagaacaagttccagaacattggtgcaaagttggtgcaggat
gtagccaacaacactaatgaggaggctggagacggcaccaccactgccactgttctggcc
cgtgccatcgccaaggagggctttgatagcatcagcaagggtgccaaccccgtggagatc
cgccgtggcgtcatgcttgctgttgaaacagtcatcaatgagttaaagaggctgtctaag
cccgtcacaactccagaggagattgcacaggttgctaccatctctgccaatggagatgta
gagattggtaccataatctccaacgccatgaagaaagtgggccgcaagggtgttattact
gtcaaggatggcaaaactcttcatgatgaactggagatcattgaggggatgaagtttgat
cgtggctacatctccccctacttcatcaacacagctaaaggtcagaagtgtgagttccag
gatgcctacctgctgctgagtgagaagaagatctccagtgtccagagcattgtgccagcc
ctggagattgccaaccagcaccgcaaacctctggtcattgtggctgaggatgtggacgga
gaggcgctcagcaccctggtcctcaacagactgaaggtggggctccaggtggtagcagtg
aaggccccaggttttggagacaacaggaagaaccaactgcatgacatggctattgccacc
ggtggcactgtgttcggggatgaggcggtgggcgtggccctggaggacatccaggctcac
gactttggacaggttggcgaggtcttggttaccaaggacgacaccatgcttctgaaaggg
cgcggggatgcggcactcatcgagaagcgctctcaagagatcgccgagctgctggagagc
agcaccagcgactacgagaaggagaagctcaacgagcgtctggccaagctgtctgacgga
gtggcggttcttaagatcggaggaacaagtgatgtggaggtgaacgagaagaaggaccgt
gtgacggatgccctcaacgccacaagggcagcagtagaggagggcatcgtgcccgggggc
ggctgcgccctgctgcgctgcatccctgccctggacaacatcaagcctgccaacgaagac
cagaagattggtttggagatcatcaggagggcactgcgtatcccagccatgactattgcc
aagaacgctggtgtagaaggttcgcttgtggtggaaaagatcctgcagggaggacctgag
ctgggctacgatgctctcattggagaatatgtcaacatggtggaaaagggcatcatcgac
cccactaaggtggttaggaccgcactaatggatgctgccggtgttgcctctctactctcc
actgctgaggctgtggtcacagagctgcccaaggaggagaaggagatgccaggcggcggg
ggcatgggcggtatgggcggtatgggcggcatgggaggcatgggtggcggcatgttctaa
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