Osmerus eperlanus (European smelt): 134017360
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Entry
134017360 CDS
T10927
Symbol
msx1a
Name
(RefSeq) homeobox protein MSX-1a
KO
K09341
homeobox protein MSX
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oep03000
]
134017360 (msx1a)
Transcription factors [BR:
oep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
134017360 (msx1a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
HTH_NDX
DUF7645
Motif
Other DBs
NCBI-GeneID:
134017360
NCBI-ProteinID:
XP_062312877
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All DBs
Position
1:complement(8238618..8240496)
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AA seq
280 aa
AA seq
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MAPTIAMSALSVGLKTKDSTRSFVVGRSEMQTSLSMAEETVKPKVAILPFSVEALMADRK
PSRDLSLSDVSAVAGSSHTHGARMSSLSSLDNSVSSLAMGSPFSVGDIMNIQDDALVKPE
SPESKDRNSWMQSPRFSPTPPRRLSPPACPLRKHKTNRKPRTPFTTSQLLALERKFRQKQ
YLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPPAFGISFP
LGAHVPASYGGSHPFQRHSLPVSPVGLYAAHVGYSMYHLA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggccccaactattgccatgtcagctttatccgtgggcttgaaaactaaagacagcacg
cgctcatttgtcgtcgggagaagcgagatgcagacaagtttgagcatggcagaggagacg
gtaaagcccaaagttgccatccttcctttcagcgtcgaagcgttgatggccgacagaaaa
ccgagcagagacttgtcattatcagatgtgtcggctgttgcgggatcgtctcatacgcat
ggcgcaaggatgagctcgctttcaagtttggataactcagtgtcctctttggccatgggt
tccccgttctcagtgggcgatattatgaacattcaagacgatgcgttggttaaacccgag
agcccagaaagcaaggacaggaactcttggatgcagagtcctcgtttttctcccactcct
ccacggaggttaagtccccccgcctgtccactgagaaaacacaagacgaacagaaagcct
cggactccttttaccacgtcccaactattagctctggagagaaagttccgccagaagcag
tacctctccatcgctgaacgcgctgagttctcaagctcgctcaacttgacagaaactcag
gtcaaaatatggttccaaaacaggagagctaaagccaagagactacaggaggcagaactg
gaaaaactgaaaatggcagccaagcctatgctgcctccggcgttcgggatttcctttccg
ctaggtgcgcacgtccccgcgtcctatggaggatctcacccttttcagaggcactccctg
ccggtttctcccgtgggactgtacgctgctcatgtcggatacagcatgtatcacctggcc
tga
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