Osmerus eperlanus (European smelt): 134017384
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Entry
134017384 CDS
T10927
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04145
Phagosome
oep04148
Efferocytosis
oep04510
Focal adhesion
oep04512
ECM-receptor interaction
oep04810
Regulation of actin cytoskeleton
oep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134017384 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134017384 (itgb5)
04148 Efferocytosis
134017384 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134017384 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
134017384 (itgb5)
04810 Regulation of actin cytoskeleton
134017384 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oep04131
]
134017384 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oep04515
]
134017384 (itgb5)
Membrane trafficking [BR:
oep04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
134017384 (itgb5)
Cell adhesion molecules [BR:
oep04515
]
Integrins
Integrin beta subunits
134017384 (itgb5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
PSI_integrin
Integrin_b_cyt
EGF_integrin
I-EGF_1
EGF_2
vWA_SIBA-E
EGF_Teneurin
EGF_TEN
Fijivirus_P9-2
Motif
Other DBs
NCBI-GeneID:
134017384
NCBI-ProteinID:
XP_062312917
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All DBs
Position
3:7276462..7307269
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AA seq
803 aa
AA seq
DB search
MWSPWRLTYRTALSCMVWIIFIQSVKGLNICMSGSATSCEECLLIHPSCAWCSQEEFGRV
RTLISRCDLSQNLQKRGCDARFIENPRSTASVLKSEPLSSKGSGPTQYDVIQIMPQKISL
SLRPGDQESFEVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMGKLTSNFR
LGFGSFVDKNMSPFSYTAPKYQDNPCDGYKLFPKCVPSFGFRHLLSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQPH
DGQCHLNEKNEYSASTEMDYPSLALLGEKLAENNIYLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNIIQLIIHAYNNIRSKVELTVWDHPEDLSLSFSATCQDGQPLQGLRKCADL
KIGDTVSFKVSVDSWNCPPRGTQQSFTIRPVGFKDRLEVSVDYKCDCGCTGLTQANSSRC
SSIGAYTCGTCRCEPGYLGARCECQEGDAGSQYLSACREAEGKQTCSGRGECSCNQCLCY
ESEFGKIYGSFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTEISSCMS
EDGQTCSGRGHCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFSTGRLADNQ
TCQRLCKDKIITVETLKTEDPNAVLCLYKTENECVMKFTYSEHANGQSVLTALEEPECAA
APDAMTVLLAVVGSILLVGIVLLAVWKLVITFHDRREFARFQSARSRARYEMASNPLYKQ
PISSYPVETDFNMCGKNYNGAVH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtccttggcggttgacgtaccgtacagctctcagctgcatggtttggataata
tttattcaaagtgtcaaaggtctcaatatatgcatgagtggcagcgctacatcctgcgag
gaatgccttctcatccaccctagctgcgcatggtgctctcaagaggaatttggtagggtg
cggaccctcatatcacggtgtgatctgagtcagaatctgcagaagcgaggctgtgatgcc
cgcttcatcgagaaccccaggagcaccgcctcggtgctgaagagcgaacccctgagctcc
aaggggtcgggaccgactcagtatgacgtcatccagatcatgcctcagaagatctctctg
agtcttcgaccaggggaccaggaatcatttgaggtacaggttcgtcaggtggaggattac
ccggtggatctctactaccttatggacctctcgctgtccatgaaggatgacctggacacc
atacgcaacctaggcaccaaacttgccgatgagatgggaaaactcaccagcaacttcagg
ctgggcttcggatcctttgtggacaagaacatgtcgccgttctcctatacggcacccaag
taccaggataacccatgtgatggatacaagctcttcccaaaatgtgttccctcgtttggt
ttccgacaccttctgtccctgactgacaaggtggaccgcttcaacgaggaggtgcagaag
cagatggtgtctcgcaaccgtgacgccccagagggcgggttcgacgccatcttgcaggct
gcggtttgtaaggagaggataggctggagaaaggaggccttccatctccttgtgtttgcc
acggatgatgtgccccatctggccctggacggtaaactgggaggactagtccagccccac
gacggccagtgccacctaaatgagaagaacgagtacagcgcctccactgaaatggactac
ccatctttggctctcttgggagagaagctggcagagaacaacatctatcttatctttgct
gtgactaaacgactctatgtcatttacaagaactttacagccctaataccagggaccact
gtggagattctggatcaggactcaaaaaacattatccagctaatcatccatgcctacaat
aacatccgctccaaggtggaactgacagtgtgggaccaccctgaggacctcagtctgtcc
ttcagcgctacctgccaggacggacaacctctgcagggcctcaggaagtgtgccgacctc
aagataggagacacggtgtccttcaaagtgagcgtggactcatggaactgccccccccgc
ggcacccagcagagcttcaccatcaggcccgtgggtttcaaggaccgtctcgaggtgtct
gtcgactacaaatgtgactgtggctgcacgggcctcacccaggccaacagctcccgctgc
agttccatcggcgcgtacacctgcggcacctgccgctgcgagccgggctacctgggcgcc
cgctgcgagtgccaggagggcgacgcgggcagccagtacctgagcgcttgccgggaggcg
gaggggaagcagacctgcagcgggcggggagagtgcagctgtaaccagtgtctgtgctac
gagtccgagttcggcaagatctacggcagcttctgcgagtgcgacgacttctcctgcgcc
cgccacaaaggcatcctgtgctcaggtcacggggagtgccactgcggggagtgtaagtgt
catgcgggctacatcggggacaactgcaactgctccacagagatctcctcctgcatgtca
gaagacgggcagacctgcagtggccgtggccactgtgtgtgcggacgttgccagtgcaca
gagcccggagcctttggagacacctgcgagaaatgccccacctgccccgatgcctgtggc
accaagagggagtgtatcgagtgtcgcctcttcagcactggacgactcgccgacaaccag
acctgccagcgtctgtgtaaggacaagatcatcacagtagaaactctcaaaacggaggac
cccaacgcggtcctctgcttgtacaagaccgagaacgaatgcgtcatgaagttcacttac
tcggaacacgccaacggacaatctgtcctcacagctctggaagaaccagaatgtgccgcc
gcgcccgacgccatgacggtgctgctggctgtggttggcagcatcctgctggttggcatc
gtgctgctggccgtctggaaactggtcatcaccttccacgaccggcgcgagtttgcccgc
ttccagagcgcgcgctcccgtgcacgatacgagatggcctccaacccactgtacaagcag
cccatttccagctaccctgtagagactgactttaacatgtgcgggaagaactacaatgga
gcagtccactga
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integrated database retrieval system