KEGG   Osmerus eperlanus (European smelt): 134017384
Entry
134017384         CDS       T10927                                 
Symbol
itgb5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep04145  Phagosome
oep04148  Efferocytosis
oep04510  Focal adhesion
oep04512  ECM-receptor interaction
oep04810  Regulation of actin cytoskeleton
oep04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oep00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    134017384 (itgb5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    134017384 (itgb5)
   04148 Efferocytosis
    134017384 (itgb5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    134017384 (itgb5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    134017384 (itgb5)
   04810 Regulation of actin cytoskeleton
    134017384 (itgb5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oep04131]
    134017384 (itgb5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:oep04515]
    134017384 (itgb5)
Membrane trafficking [BR:oep04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    134017384 (itgb5)
Cell adhesion molecules [BR:oep04515]
 Integrins
  Integrin beta subunits
   134017384 (itgb5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail PSI_integrin Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 vWA_SIBA-E EGF_Teneurin EGF_TEN Fijivirus_P9-2
Other DBs
NCBI-GeneID: 134017384
NCBI-ProteinID: XP_062312917
LinkDB
Position
3:7276462..7307269
AA seq 803 aa
MWSPWRLTYRTALSCMVWIIFIQSVKGLNICMSGSATSCEECLLIHPSCAWCSQEEFGRV
RTLISRCDLSQNLQKRGCDARFIENPRSTASVLKSEPLSSKGSGPTQYDVIQIMPQKISL
SLRPGDQESFEVQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLADEMGKLTSNFR
LGFGSFVDKNMSPFSYTAPKYQDNPCDGYKLFPKCVPSFGFRHLLSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKERIGWRKEAFHLLVFATDDVPHLALDGKLGGLVQPH
DGQCHLNEKNEYSASTEMDYPSLALLGEKLAENNIYLIFAVTKRLYVIYKNFTALIPGTT
VEILDQDSKNIIQLIIHAYNNIRSKVELTVWDHPEDLSLSFSATCQDGQPLQGLRKCADL
KIGDTVSFKVSVDSWNCPPRGTQQSFTIRPVGFKDRLEVSVDYKCDCGCTGLTQANSSRC
SSIGAYTCGTCRCEPGYLGARCECQEGDAGSQYLSACREAEGKQTCSGRGECSCNQCLCY
ESEFGKIYGSFCECDDFSCARHKGILCSGHGECHCGECKCHAGYIGDNCNCSTEISSCMS
EDGQTCSGRGHCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRECIECRLFSTGRLADNQ
TCQRLCKDKIITVETLKTEDPNAVLCLYKTENECVMKFTYSEHANGQSVLTALEEPECAA
APDAMTVLLAVVGSILLVGIVLLAVWKLVITFHDRREFARFQSARSRARYEMASNPLYKQ
PISSYPVETDFNMCGKNYNGAVH
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgtggagtccttggcggttgacgtaccgtacagctctcagctgcatggtttggataata
tttattcaaagtgtcaaaggtctcaatatatgcatgagtggcagcgctacatcctgcgag
gaatgccttctcatccaccctagctgcgcatggtgctctcaagaggaatttggtagggtg
cggaccctcatatcacggtgtgatctgagtcagaatctgcagaagcgaggctgtgatgcc
cgcttcatcgagaaccccaggagcaccgcctcggtgctgaagagcgaacccctgagctcc
aaggggtcgggaccgactcagtatgacgtcatccagatcatgcctcagaagatctctctg
agtcttcgaccaggggaccaggaatcatttgaggtacaggttcgtcaggtggaggattac
ccggtggatctctactaccttatggacctctcgctgtccatgaaggatgacctggacacc
atacgcaacctaggcaccaaacttgccgatgagatgggaaaactcaccagcaacttcagg
ctgggcttcggatcctttgtggacaagaacatgtcgccgttctcctatacggcacccaag
taccaggataacccatgtgatggatacaagctcttcccaaaatgtgttccctcgtttggt
ttccgacaccttctgtccctgactgacaaggtggaccgcttcaacgaggaggtgcagaag
cagatggtgtctcgcaaccgtgacgccccagagggcgggttcgacgccatcttgcaggct
gcggtttgtaaggagaggataggctggagaaaggaggccttccatctccttgtgtttgcc
acggatgatgtgccccatctggccctggacggtaaactgggaggactagtccagccccac
gacggccagtgccacctaaatgagaagaacgagtacagcgcctccactgaaatggactac
ccatctttggctctcttgggagagaagctggcagagaacaacatctatcttatctttgct
gtgactaaacgactctatgtcatttacaagaactttacagccctaataccagggaccact
gtggagattctggatcaggactcaaaaaacattatccagctaatcatccatgcctacaat
aacatccgctccaaggtggaactgacagtgtgggaccaccctgaggacctcagtctgtcc
ttcagcgctacctgccaggacggacaacctctgcagggcctcaggaagtgtgccgacctc
aagataggagacacggtgtccttcaaagtgagcgtggactcatggaactgccccccccgc
ggcacccagcagagcttcaccatcaggcccgtgggtttcaaggaccgtctcgaggtgtct
gtcgactacaaatgtgactgtggctgcacgggcctcacccaggccaacagctcccgctgc
agttccatcggcgcgtacacctgcggcacctgccgctgcgagccgggctacctgggcgcc
cgctgcgagtgccaggagggcgacgcgggcagccagtacctgagcgcttgccgggaggcg
gaggggaagcagacctgcagcgggcggggagagtgcagctgtaaccagtgtctgtgctac
gagtccgagttcggcaagatctacggcagcttctgcgagtgcgacgacttctcctgcgcc
cgccacaaaggcatcctgtgctcaggtcacggggagtgccactgcggggagtgtaagtgt
catgcgggctacatcggggacaactgcaactgctccacagagatctcctcctgcatgtca
gaagacgggcagacctgcagtggccgtggccactgtgtgtgcggacgttgccagtgcaca
gagcccggagcctttggagacacctgcgagaaatgccccacctgccccgatgcctgtggc
accaagagggagtgtatcgagtgtcgcctcttcagcactggacgactcgccgacaaccag
acctgccagcgtctgtgtaaggacaagatcatcacagtagaaactctcaaaacggaggac
cccaacgcggtcctctgcttgtacaagaccgagaacgaatgcgtcatgaagttcacttac
tcggaacacgccaacggacaatctgtcctcacagctctggaagaaccagaatgtgccgcc
gcgcccgacgccatgacggtgctgctggctgtggttggcagcatcctgctggttggcatc
gtgctgctggccgtctggaaactggtcatcaccttccacgaccggcgcgagtttgcccgc
ttccagagcgcgcgctcccgtgcacgatacgagatggcctccaacccactgtacaagcag
cccatttccagctaccctgtagagactgactttaacatgtgcgggaagaactacaatgga
gcagtccactga

DBGET integrated database retrieval system