Osmerus eperlanus (European smelt): 134017409
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Entry
134017409 CDS
T10927
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a
KO
K16578
CLIP-associating protein 1/2
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134017409 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oep04812
]
134017409 (clasp1a)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
134017409 (clasp1a)
Cytoskeleton proteins [BR:
oep04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
134017409 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
HEAT_EF3_N
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
ParcG
MMS19_C
HEAT_DAAF5
TAN
Motif
Other DBs
NCBI-GeneID:
134017409
NCBI-ProteinID:
XP_062312951
LinkDB
All DBs
Position
3:7698920..7759635
Genome browser
AA seq
1585 aa
AA seq
DB search
MEPNMEYCLAQVLQKDMGRRLQVGQELIDYISDRDKSHDLDQDQSDLDKMVDGIATTWVN
CSNFKVALLGLDLLSALVTRLQDRFRTHLGTALPSLIDRLGDAKDQVRDQDQILLLKIME
QAATPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNMYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMACLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMIPSSGSDK
NFDDEDSVDGGRSSSSSSSKAPPGGRRPVAVGCVRRPSSAGAPKVAGKEGASAGGVDEED
FVKSYVDVPTIQLHSNREMEEHISKVREVLSDDKHDWEHRVVALRKVRSLLLGGALDYEG
FPQQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSLLGNKFDHGAESIMPTLLNLVPNS
AKIMASSGVVAIRLILRQTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTQTLE
RHVAVLTETIRKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHLK
SSDSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSMTRSKLISSRVSSTPGSLQRSRSDI
DVNAAASAKSRLSTVPSASPFSSASALPPGSYASLGRVRTRRQSSGSAVGASSTVVDSRG
RSRAKVVSQSQRSRSANPIGAGSRSSSPGKLLGHAYGRIPRAAVSAASTPLDKRSKIPRS
QGCSRETSPSRMGLARSRIPRPSMSQGCSRDTSRESSRDTSPTRGFAPLASRRHSRSTSA
LSTADPHGQSDRYGLLHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRR
YESPGIYSDDDANSDASSACSERSYSSRNGGGLPHYMRQTEDVAEVLNHCASSNWSERKE
GLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVTVHREDLQD
WLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRESFPFDQQFNILMRFIVDQTQTPNLKV
KVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELN
TPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSSSVGSPSNTIGRTPPRLTPSRSSPLT
SPTNCSHGGLSPSRLWGWSVDGLSKHPLPPPPPHSTPAAPSLRVLRRAYSPSMTEYDTEN
MNSEEIYSSLRGVTEAIQSFSYRSQEDLNEPIRRDGKRDDGAGREGGVASPGSDARLGLD
VVEGGRTALDNKTSLLNTPSPRSFSGPRGREFAPYGYGDTISTYDKSALKEAVFDDDVEQ
FRDCRRQDCGENKMVVVKGFAPVPHHHSDLVADLLKELSNHNERVDERKGALVELLKITR
EDNLAVWDEHFKTILLLLLETLGDKDHTIRALALRVLKEILRNQPIRFKNYAELTIMKTL
EAHKDSHKEVVRAAEESAVTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERI
TKESLVTLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKL
LNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaatatggagtactgtcttgctcaggtgctgcagaaggacatgggtcgcagg
ctgcaggtcggccaggagctcatcgactacatatctgacagggacaagtcacatgacctg
gatcaggaccaatcagacctggacaagatggtggatggcatcgctaccacctgggtcaac
tgtagcaacttcaaggttgctttgctaggattggatcttttatctgccttagtgacaagg
ttgcaggaccgctttaggacacacttgggaacagccctgcccagcctgatagaccgcctg
ggtgatgccaaagaccaagtccgcgaccaagatcaaatcctgctgctgaagatcatggaa
caagctgcaacaccacagtacgtgtgggaccgaatgctgggaggcttcaaacacaagaac
aaccggaccagagaaggagtttgcctctgcctcatctctacgcttaacatgtatggggcg
caaggcttgaccctcagtaaaatcgtcccccacatctgtaatctgctcggagaccctacc
agtcaggtgagagacggggccatggcctgcttggtggagatctacagacacgtgggggag
agggtgaggatggacctcagcaagaagggcctgccccagtcacggttgaacgtcatcttc
agcaagtttgacgaagtccaaagatctgggaacatgattccttcctcaggctcagacaag
aactttgatgacgaggactcggtggacgggggccggtcctcctcctcctcgtcctccaag
gcaccccccgggggccggaggcccgtggccgtgggctgcgtcaggaggcccagctcggcc
ggcgcgcccaaggtcgcaggtaaagagggtgccagtgcaggtggcgtcgacgaggaggac
ttcgtcaagtcctacgtggatgtgccgaccatccagctccactccaaccgtgagatggag
gagcacatcagcaaggtgcgggaggtgctgtccgacgacaagcacgactgggaacaccgc
gtggtggcgctaaggaaggtgcgctcgctcctattgggcggagcgttggactacgagggc
ttcccccagcagctccgcctcctggaagcccccctgaagctgtcggctaaggacctgcgc
tcccaggtggtccgcgaggcctgcatcaccctggggcatctgtcgtcattgctgggcaac
aagtttgaccacggggcggagagcatcatgcccacgctcctcaacctggtgcccaacagc
gccaagatcatggcctcgtctggggtggtcgccatccgcctcatcctgaggcaaacccac
tacccgcgcctcatccccatcatcaccagtaactgcacctccaaatcagtggcggtgaga
aggcgctgctacgagttcctggacctcatgctacaagagtggcacacacaaaccctggag
agacacgtggccgtcctcacagagaccatcaggaagggaatccacgacgccgactctgag
gccagatctgtcgccaggaagtgctattggggtttccatggccactacagccgggaggcg
gagcatttgttccaggcgctggagtcaacctatcagaaggctctccagtcacacctgaag
agttccgacagcatcgtgtccctgccccagtctgaccgctcctcctccagctcccaggag
agcctcaaccggcccctgtctgtcaagagtgtcataggaggcagcatgacgcggagtaag
ctgatcagctccagggtctcctccacgcccggctccctccagcgttcccgtagtgacatt
gacgtcaacgccgccgccagtgccaagtcccgcctctccaccgtcccctcggcgtctccc
ttcagctctgcctccgccctgcctccagggtcctacgcttccctaggccgagtgcgtacc
aggagacagagctcaggaagtgctgtgggggcctccagcactgtggtggacagcaggggg
cgcagccgagccaaagtggtttcccagtcgcagcgatccagatcggccaatcccatcggt
gcgggcagccgctccagctccccgggcaagctgctgggccacgcctacgggcggatcccc
cgagccgccgtgtcggccgccagcacgccgctggacaagaggagcaagatcccccgcagc
cagggctgcagccgggagaccagccccagccgcatgggcctggcccggagccgcatcccc
cggcccagcatgagtcagggctgcagccgggacaccagccgcgagagcagccgcgacacc
agccccacccggggcttcgctcctctggcctcccgacgtcactcccgctccaccagtgcg
ctctccacggccgacccccacggccagtcagaccggtatggtttgctccaccaggccagg
atctcggcgtcggtcaacgccatgcgagtcctcaacaccggtactgaggtggaggccgcc
gtggcagatgctctgctgttaggagactccaggaataagaggaagccgatgcggcggcgc
tacgagtccccggggatctactcggacgacgacgccaacagcgacgccagcagcgcctgc
tccgagcgctcgtacagctcccgcaacggcggcggcctgccccactacatgcgtcagacg
gaggacgtggccgaggtgctcaaccactgcgccagctccaactggtctgagaggaaggag
gggctgctgggcctgcagaacctgctgaagagccagaggatcctcagccgcgtggagctg
aagagactgtgtgagatcttcaccaggatgtttgccgacccacacagcaagagagtgttc
agcatgttcttggagaccctggtagactttgtcacggtgcacagagaggacctccaggac
tggctgttcgtcctgctcacccagctgctgaagaagatgggcgcagacctgctgggctcc
gtccaggccaaggtccagaaagccctggacgtgaccagggagtctttccccttcgaccag
cagttcaacatcctgatgaggttcatcgtggaccagacacaaacgcccaacctcaaggtg
aaggtggccatcctgaagtacatcgagtccctggccaggcagatggaccccacagacttt
gtcaactccagtgaaacacgcttagccgtgtctcgcatcatcacgtggaccacagaaccc
aagagttccgacgtccggaaggctgcccaggtggtgctgatctctctgtttgagctcaac
acccccgagttcactatgctgttgggggctctgcccaagaccttccaggacggagccacc
aagctgctccacaaccacctgaagaactccagcaacaccagcagcagcgtgggttctcca
agcaacacgattggccgaactccaccccgcctcacccccagtcggtccagccccctgacc
tccccaaccaactgctcccatggaggactgtctcccagtcggttgtggggttggagtgtc
gacgggctgtcaaagcacccccttccccctcctccgcctcactccacccctgccgccccc
tccctcagggtcctccgcagagcttactctcccagcatgacggagtacgacacggagaac
atgaactccgaggagatctacagctcgctgcgcggcgtcaccgaggccatccagagcttc
agctaccgcagccaggaggacctcaacgagcccatcagacgagacggcaagagggacgat
ggcgctgggagagaaggaggggtggcctccccgggctctgacgcccgcctggggctggat
gtggtcgagggggggcgtaccgccctggacaacaagacctccctgctcaacaccccatcg
ccccgctccttctctgggccgcggggccgcgagttcgccccctacggctacggggacacc
atcagcacctacgacaagagcgccctgaaggaggccgtgttcgatgacgatgtggagcag
ttccgcgactgccgccggcaggactgtggagaaaacaagatggtggtcgtcaagggcttt
gcacctgttccccatcaccactcagacctggtggccgacctgctgaaggagctgtccaat
cacaacgagcgcgtggacgagcgcaagggggcgctggtggagctgctgaagatcacgcgg
gaggacaacctggccgtgtgggacgagcacttcaagaccatcctgctgctgctgctggag
accctgggggacaaagaccacaccatcagggccctggctctgagagtcctgaaggagatc
ctgaggaaccagcccatccgcttcaagaactacgctgagctcaccatcatgaagaccctg
gaggcccacaaagactcgcacaaagaggtggtgcgggccgcagaggagtcagctgtcacc
ctggcaggctccatccatccagagcagtgcatcaaggtgctgtgccccatcgtgcagacg
gccgactaccccatcaacctggccgccatcaagatgcagaccaaggtgatcgagcgcatc
accaaggagtccctggtcaccctgctgcccgacatcatccccgggctgcttcagggctat
gacaacacagagagtagcgtacgcaaggccagcgtgttctgtctggtggccatctactcc
gtgattggtgaagacctcaagccacacttggcccagctcaccggcagcaagatgaagctg
ctaaacttgtacattaagagagcccagaccaccaacagcaacagcagcagctcctctgac
gtgtcctcacacagctag
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integrated database retrieval system