Osmerus eperlanus (European smelt): 134017415
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Entry
134017415 CDS
T10927
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03440
Homologous recombination
Brite
Messenger RNA biogenesis [BR:
oep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
134017415 (bard1)
Ubiquitin system [BR:
oep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
134017415 (bard1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
134017415 (bard1)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
134017415 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134017415
NCBI-ProteinID:
XP_062312966
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All DBs
Position
3:8301349..8316376
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AA seq
829 aa
AA seq
DB search
MDQNAFTEVKGWTRTREAIADFRKLLLCSRCLKLMNEPVCLGICEHMLCRSCAGPQAGAG
CVVCHSPAWVKDIQINRQLSNITDLFCSLDSLLNPTENSDPSPVELETQPSNSVLKQKKN
YKIWFSPRSRKVRCRLENRTDADLCASGGTPEKPTSTSSEMTSTKSKDLSIYNFNSSSQD
SDPSSPKRGKGVVSKKRKPQNAVRKPAAGGNKPTTRKQTKQAFKRNRLEAINEQWGIGIG
GETQGEKISSGEGDHMSNKRVSFLSPAILSGEMQPEPPQGESIVLSPNRSILKGAQTENG
VHTSDDQDQSSQSPLTSPFSLVNLSKSPKSSQRGVEKDLPRSPKITPKRARVAERGRASQ
STPKRPRTSTSQGRRPEGQRTPVQPSPCSPASPNQGRMTRNARGELRGSPGSPASVGKRS
PGTPGGSGGKSSQSSPAFMKRNFKGETPLHLAAIKMIRQPSQPCENTRLSIIPVNTVVIP
AWSPYKGEVEAVKELLEQGADPNLKDNAGWTPLHEACNLGHQRVVEVLLREGALLNTPGY
ENDSPLHDAARNGHASIARLLLEHGASQSVLNMFGLRPVDCAVSPEMQAVFEAASKGPHP
ASAPLSPLPSLYKVSDGASRDERVVVLASKLSKSQHIRLTKLSQTLGGTEAESFSSSVTH
VVVPDGPMPTTLTTLLGVLSGCWVLGFSWVEKSLQAASWAEETEHEAEGPQRSRMNKRSL
LPPLFDGCFFFFLGSFKNPPRQVLLQLVREGGGQVLSRHPKPHSDVTQTLNAAAYHALPG
SDQALCTQYIIYDPQGSYKPPRVRLGKVWSAPSSWIISCVSAFQLLPVS
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaatgctttcaccgaagtaaaaggttggacaagaacgagggaggctattgca
gattttcgtaaacttttgctctgttcaagatgtttgaaactcatgaacgaaccagtgtgc
ctcggaatttgcgaacacatgctatgcaggtcttgtgctggtcctcaagctggagctggc
tgtgtggtttgtcacagccctgcctgggtgaaggatatccagatcaacaggcagcttagc
aacatcacagacctcttctgcagtttggactccctgctcaaccccacagagaactcagat
ccctcccctgttgagcttgaaacgcagccttcgaactctgtcttgaagcaaaagaaaaac
tacaagatatggttcagtcctcgcagccgtaaggtgcgttgccgcttggagaaccgcacg
gatgctgatctctgtgcatcaggcggcacgcccgagaaacctacctcgacatcatccgag
atgacctcaaccaagtctaaagacctgtccatctacaacttcaattcctcctcacaagac
tccgacccctcctctcccaaaagaggcaaaggggttgttagcaaaaaaaggaaaccgcaa
aatgcagtcagaaaacctgcagcaggtgggaacaagccaaccactcgcaagcagaccaag
caggctttcaaaaggaacaggctggaggccattaacgagcagtggggaattgggattggg
ggagagacccaaggggagaagatcagttcaggagagggagaccacatgtccaacaagagg
gtctccttcctaagccctgctatcttatcaggtgagatgcagccggaaccgcctcaagga
gaatccatagtcctcagccccaatagaagcatcctaaagggggctcagacagaaaacggt
gtccacacatctgatgaccaagaccagtccagtcagagtccacttaccagcccattttca
ctggttaacctgtccaaaagtcccaaatcaagccagagaggtgtggaaaaggaccttccc
cgctctcctaagatcacccccaagagagccagagtggcagaaagaggcagagcttcacag
agcaccccaaagcgccccaggacttctaccagccagggtcgacgcccagaaggacagagg
acaccagtccagccctctccatgctccccagccagccccaaccagggaaggatgactaga
aatgccagaggagagctgagagggagcccaggttccccggcctccgtggggaagcgctcc
ccaggtacccctggtgggtctgggggaaagtcttcccagagcagccctgcttttatgaag
aggaacttcaagggagagacgcctctgcatctggcagctataaagatgatcagacagcct
tctcaaccctgtgagaatacccggctttctataatccctgtaaacacggttgtaatccct
gcttggagcccatacaagggggaggtggaggctgtgaaggagctgttggagcagggagcc
gaccctaacttgaaggacaacgcaggctggacaccactgcacgaggcgtgtaacctgggc
caccagcgcgtggtggaggttctgctgagggagggcgctctgctcaacaccccgggctac
gagaacgactcgcccctgcacgacgcggccaggaacggccacgcgagcatcgcccggctg
ctgctggagcacggagcctctcagagtgtgctgaatatgtttgggctgcgacccgtggac
tgcgccgtgagcccagagatgcaggcagtgttcgaagcagcctcgaaaggaccccacccg
gcatccgccccactcagtcctctgcccagtctctacaaggtgtctgatggcgcgagcagg
gatgagcgtgttgtggttctggccagcaagctgtccaagtcgcagcacattcggctgacc
aaactgagccagaccctgggagggaccgaggccgaatcattctcaagctcagtgacccac
gtggtcgtgccagacgggccgatgcccaccaccctgaccaccctgctgggcgtcctcagt
ggctgctgggtcctcgggttcagctgggtggagaagagcctgcaggcagccagctgggct
gaggagaccgaacacgaggcagaaggaccccagcgcagccgcatgaacaagcggagcctg
ctgcccccgctgttcgacggctgtttcttcttcttcctgggctcctttaagaaccccccc
aggcaggtgctgctgcagctggtcagagagggagggggccaggtgctgagcaggcatccc
aagccccacagtgacgtcacgcagaccctgaacgctgcagcctaccatgccctgccaggg
tcggaccaggccctctgcacccagtacatcatctacgacccccaggggtcctacaagccg
cccagagtgcgcctgggtaaggtgtggtccgctccctcttcctggatcatcagctgcgtc
tcagctttccagctgctccctgtctcttga
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