Osmerus eperlanus (European smelt): 134017561
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Entry
134017561 CDS
T10927
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
134017561 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oep03400
]
134017561 (xrcc5)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
134017561 (xrcc5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
EF-1_beta_acid
Motif
Other DBs
NCBI-GeneID:
134017561
NCBI-ProteinID:
XP_062313286
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All DBs
Position
3:complement(12365074..12378904)
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AA seq
726 aa
AA seq
DB search
MARSSKSALVLCMDVGFSMSNSAPGQESPFEQAKKVIQKFIQRQVFAENKDELGLVLFGT
DTTKNLLADDSQYQNITVHRHMMLPDFDLLEEVHSQIQPGSQQADWLDALVVCMDLLQKE
SLGKKFERLNIAILTDLHTKVNTDQLDVIIENLKKASITLQFFLPFPLDDEDEEDGDGAG
GSSGRPAHRGKGLSREQKQGMETVRQIMLALDEEDCLEEVYPFSEAIEKLSIFKSIERRP
TAWSCQLTIGSSLSIKILGYKAVAKESLKKSWMTVDAQTNRKEDVKRDVVFCLEDDNETE
VERDDTIQGFRYGSDIVPFSKVDQDQMKYKAEGKCFAVLGFAKQNMIHRHHFMGDKILKV
FSPKDDEHAAVALSALIRALDELNMVAIVRYVYDRRCNPQVGAAFPCIKDKYECLMYVQL
PFMEDLRQFTFPSLENNKKFTPSEAQLAAMDSVIDSMMLVEEGESGKQEDLFKVHHIQNP
TFQRLFQCLHHRGLNPDTHLPSIEPWLLAALERPPMVSARCHAPLEELKKKFPLKEAVKK
KELKTSIQIFGSSSEEPEAKKVKLDEDEDFNLADITAGSVSSVGSVDPARDFCSLVRQKS
LPFGEVCQQLIGRIEQLVSQKSTHYYMKAISCIQVFREQSVKAGNAELFNSYLQSLKRSI
PDRGLHDFWGLLAQDVLTLINKDEVEGSSASKQEANEFLLMGEKEEVTAASAEGGADDVD
DLLDMM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtcttcgaaatctgcattagtgctgtgcatggacgtggggttctccatgtcc
aactctgctccaggccaagaatcaccatttgaacaagctaagaaagtcatccagaagttt
attcagagacaggtatttgctgagaacaaagatgagctgggcctagtattgttcggcacc
gacaccactaagaacctactggctgatgatagccagtaccagaatatcactgttcatcgc
catatgatgcttccagattttgacctgcttgaagaagtccacagtcagatacagcctggt
agtcaacaggccgactggttggatgctcttgttgtgtgcatggacctcttacaaaaggaa
tctctaggaaagaagtttgagcgtctcaacattgccatcctaacagacctccacaccaag
gtcaacacagaccagctagatgtcatcattgaaaacctgaagaaggccagcattactctg
cagttcttcttgccctttcctctggatgatgaagatgaggaggacggggatggagcagga
ggaagctctgggcgcccggcccacagggggaagggtctgtccagggagcagaagcagggc
atggagacggtcaggcagatcatgctggctctggatgaagaggattgcctggaggaagtg
taccccttcagtgaagccatcgagaagctgtccatcttcaagagcattgagaggagacca
acagcctggtcgtgtcagctgaccatcggcagctccctgtccatcaagatcctgggatac
aaagcagtggccaaagagtctctcaagaagtcgtggatgacggtcgatgcccagaccaat
cggaaggaggatgtgaagagagatgtggtgttctgtctggaggatgacaacgagacagag
gttgagagagatgacaccatccaggggttccgctatggtagtgacatcgtccccttctct
aaggtggaccaggaccagatgaagtacaaggctgaggggaagtgcttcgccgtactgggc
tttgccaaacagaacatgatacaccgccaccacttcatgggagacaagatcttgaaggtg
ttttcccccaaggatgacgagcatgctgcagttgccctctctgctctcatccgagcgttg
gacgaactgaacatggtggctatcgtccgctacgtgtatgaccgacgttgtaacccccaa
gtaggggccgctttcccttgcatcaaggacaagtatgagtgtctgatgtacgttcagctg
cccttcatggaagatctgcgacagttcaccttcccttctctggagaacaacaagaagttc
actccctcagaggctcagttggcagccatggactctgtcatagactccatgatgctggtg
gaagagggggagagcgggaagcaggaggacttgttcaaggtccaccacatccagaaccca
accttccagagactgttccagtgcctgcaccaccgggggttgaaccccgacacccacctc
ccttccatagagccctggctgctggctgctctggagcgcccccctatggtcagtgcacgc
tgtcatgcgcctctggaggaactgaagaagaagtttcccctcaaggaggcggtgaagaag
aaggagctgaagactagcatccagatatttggtagcagctctgaggagcccgaagctaag
aaggtgaagctggacgaggacgaggacttcaacctggccgacatcacggcaggcagcgtc
agttcggtgggcagtgtggacccagctagagacttctgcagtctggtccgccagaagagc
cttccgtttggagaggtgtgtcaacagctgattggtagaatcgagcagctggtgtcgcag
aagagtactcattactatatgaaggccatctcctgtatccaggtcttcagagagcagtct
gtcaaggctgggaatgctgagctatttaacagctacctccagtccctgaaaagaagcatt
ccagaccgtggcctacatgacttctgggggctgctggctcaagatgtcctgactctgatc
aacaaggacgaggttgagggaagctctgcctctaaacaagaagccaatgagttcctgttg
atgggggagaaggaggaagtgacggctgcttctgcagagggaggtgctgatgacgtggat
gacctgctggacatgatgtga
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