Osmerus eperlanus (European smelt): 134017588
Help
Entry
134017588 CDS
T10927
Symbol
pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oep03400
]
134017588 (pms1)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
134017588 (pms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
HMG_box
DUF2536
Motif
Other DBs
NCBI-GeneID:
134017588
NCBI-ProteinID:
XP_062313357
LinkDB
All DBs
Position
3:complement(14831804..14893337)
Genome browser
AA seq
892 aa
AA seq
DB search
MKQLPADTVRLLSSSQIITCVVNVVKELLENSLDAGASCIELKLENYGLDQIEVRDNGSG
IKVADTHVMALKHYTSKMCSYDDLECLETYGFRGEALGSICAVAEVTVTTKTIEDDVSTQ
YVLDHKGRVTAQMPIHLGKGTTVSVLKLFKSLPVRRQYCANIKKCKEEMKKVQDIMMAYA
IIKPELRLIFIHNKVVVWQKTKATDHRMALLATLGTNTVANLVHHRLEQPEILIDGFFPK
PGTDYCSNSSSNPDKAFIFVNNRPVQQKDILNLVRQHYMAQPYLADSTRCRYPILMLNII
VPAYSVDVNLKPDKTQVLLHNKEAVLTAVETLLVSLYRSGTNTEAPPISRTDKRASPISV
SLQHSGCSLHASLAMSEEMENVREDNVSKATSVCVTSAISKFSGADTLLNHQPAISDSSS
SSADDWIVNEIPVDLNVSLLEDDTVLRTDLTDTVLGENFTWLSEESWSRGTALLDPCTEE
ALQSVKLYSPTGRGYLGIGNVKGQCRLEKKVSNAITDNQASQTTIDLISHHVLKTPLSPA
SLCEEYRSEVLQEKPKASLKNIGTAVQERKKILGKEDRIRYEEKAKKHSKRYDHSTLSLL
QGQKRKDPLSNQKVLTQVFSPQPQKRKNTGLKLSQPLPFSITALRLKLHRLSFQSGPRPR
GHSLVNSLASQSPWVILYGSKLMLLNPYRAEESLIFKRLLENSILPTVNLQNPIQLTNSE
LGGAEYAQALYAMAMGSPELNSMTLFADPRLVANGFEIKLNPESPSAERHLEVTAMANCI
PFYGMEDLREILATVLHSNAKTVGECRPLKVTNYFQGEAVRLACQLPVTLTKEDVEDMLL
RKKQQLGETTQTCIHGHSFLTHLCDVPDTEEEAMALVMEKFTNKQLFYNKFT
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctgcctgcagacactgtgcgactcttgtccagctcccaaatcatcacctgt
gtggtgaatgtggtgaaagagttgcttgagaactccctggatgctggtgcctcatgtata
gagttaaaattggagaactatggactggatcaaattgaggttagagacaatgggtcggga
attaaagttgcagatacacatgtgatggctttgaaacactacacttcaaaaatgtgtagc
tatgatgacctggagtgcctggagacatacggattcagaggagaagctttgggatccatc
tgtgctgtggcagaggtaactgtcacaactaagactattgaggatgatgtcagtacccag
tatgtgctagaccacaaaggcagagtcactgcacagatgcccattcatcttggaaaaggt
accacagttagtgtgttgaagctttttaaaagtcttcctgtgagaaggcagtactgtgcc
aacataaagaagtgcaaagaagaaatgaagaaagtgcaagacatcatgatggcctacgcc
atcataaaaccagagctaaggctcatcttcattcacaataaggttgtagtatggcaaaag
accaaagcaacagatcacaggatggccctcttggccacactcgggacaaacactgtagca
aatcttgtacatcatcgactagagcaaccagagattttaatagatggattctttcctaaa
cctggtacggattattgttctaacagctccagtaaccctgacaaagcattcatctttgtc
aacaatcggcctgtccaacaaaaagatatcctaaacttagtgcggcagcactacatggcc
cagccatacctggcggactcaacacgctgtcgctatcccatcctaatgcttaatatcata
gttccagcctacagtgtagatgtcaacctgaagcctgacaaaacacaagttctgcttcac
aataaggaggctgtgctgactgcagtggaaaccctactggtttccctctataggtctggg
acaaatactgaggctccaccaatcagtagaacggacaagagagcatctcccatttcagtc
agtcttcagcattctggatgttcattgcacgccagtttggcaatgtcagaagaaatggaa
aacgtcagggaagacaatgtgtccaaggctacatctgtctgtgttaccagtgctatatca
aagttttcgggggctgacacacttttaaatcatcaacctgcaattagcgattcctcatct
tcctctgcagatgactggatagttaacgagatcccagtggacttaaatgtctcccttcta
gaagatgacacagtactgaggacagacttaacagatacagttctaggggaaaactttaca
tggttgtcagaagaaagttggagtagaggcactgctctgcttgacccctgtacagaggaa
gccctgcagtctgttaaactctattcacccactgggagaggatatttgggcataggtaat
gtcaaaggccagtgccgtcttgaaaaaaaggtgtctaatgccattacagataatcaggca
tcacagaccactattgatctgatcagtcatcatgtcctgaagacacccctttcccctgct
tcactatgtgaggagtacagaagtgaggttctacaggagaagcccaaagccagcctcaag
aacatcggcactgctgtgcaggagagaaaaaaaatcctggggaaggaggacagaataagg
tatgaggagaaggcaaagaaacactctaagcgctatgaccattcgacactgtctttgctc
caaggccagaaacgcaaggacccactttccaaccagaaggtcctgacccaggtgttctcc
ccccagccccagaagaggaagaatactgggttaaaactatcccagccccttcctttcagt
ataactgctcttagactgaagctccatcgtctatcattccagagcggaccaagaccaaga
ggtcacagtcttgtaaacagcctagcctctcagagcccctgggtcattttatatggtagc
aagctcatgttgttaaatccatatcgggcagaggagtccctgatttttaagagacttcta
gagaatagcatacttccaactgtgaatctacagaaccctatacagttgacaaacagtgaa
cttgggggtgctgagtatgcccaagctctctatgcaatggcgatggggagtccagagctt
aatagcatgaccctctttgctgaccccaggcttgtggcaaatggctttgaaatcaaactc
aatccagaatccccatctgcagagcgacacctggaagtgacagcaatggcgaactgcata
cctttctacggtatggaggaccttagggagatcctggcgactgtcctgcatagtaatgcc
aagacagtgggagagtgccggccactcaaagtcaccaactactttcaaggagaagctgtt
cgcttggcctgtcagttgcctgtaactttgactaaagaggatgtagaggacatgctctta
cggaagaaacagcaacttggagagacaacacagacttgcatccatggacactcatttctt
acgcacttatgtgatgttcctgacactgaagaggaggctatggctttagtaatggaaaaa
ttcaccaacaaacaattattttacaataagtttacctga
DBGET
integrated database retrieval system
