KEGG   Osmerus eperlanus (European smelt): 134017638
Entry
134017638         CDS       T10927                                 
Symbol
upf3a
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
  KO
K14328  regulator of nonsense transcripts 3
Organism
oep  Osmerus eperlanus (European smelt)
Pathway
oep03013  Nucleocytoplasmic transport
oep03015  mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:oep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     134017638 (upf3a)
   mRNA cycle factors
    P-body specific factors
     134017638 (upf3a)
SSDB
Other DBs
NCBI-GeneID: 134017638
NCBI-ProteinID: XP_062313490
LinkDB
Position
3:complement(17111123..17118590)
AA seq 484 aa
MRSEKDQTTGGREKTVVEIQFKDIPREPDGVSVHSKQKEEKKEVFTKVVIRRLPPSLSKD
QLEEQLSPLPSYDYFEFFPADQSLYPHLFSRAYINFKNLEDILLFRDRFDGYVFIDSKGQ
EYPAVVEFAPFQKISKKKLKKKDAKAGSIEEDPEYRRFLESYSCDEEKSLANPETLLGEI
EAKTRELIAKRTTPLLEYIKNKKLEKQRIRDEKREERRRRELEKKRQREDEKRKRREEER
RKRKEAEKQKKLSEKEIKIKLLKKSDRDDDLDSDRLKDKGDSGETDRNKWDKPSGHAKSK
EPKEKGQQEGDKEQREHSRRQKDHRGRDEERKRQRHHYEFDKFMRRKEETKWGKGYCHDR
AKKEGHHHGYYCTEGGDKGGKEDREDQGGRKERIRNKVSEKSVIVHQDRGTAQSEGTHQI
GGSLPAKDRPAMQLYQPGARNRKRMISGGKGFDCPPVSHALEPGPEPCYEVVTMGTGSEK
SGDE
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgaggtctgaaaaggaccaaacaactggaggtagggagaaaaccgtcgttgaaatacaa
ttcaaagatattccacgggaacccgacggtgtgtccgtacactccaagcaaaaagaggaa
aagaaagaggttttcaccaaggtggttatccggcgacttccacccagtctttccaaggac
cagttggaggagcaactcagtccccttccgtcctacgactacttcgagtttttcccagct
gaccaaagcctctacccacacctgttctccagagcttacatcaacttcaagaacctagag
gacatcttgctttttagggatcgttttgatggctacgttttcattgatagtaaaggccag
gagtacccagctgtggtagagttcgccccattccagaagatttcgaaaaagaagttaaaa
aagaaagatgccaaagctggaagcattgaagaagacccagagtaccggcgcttcctggag
agctactcctgcgatgaggagaagtccctggccaaccctgagactctgctgggggagata
gaggccaagaccagggaactcatagccaaaagaacaacgccgcttctggagtacatcaag
aataagaaactcgagaagcagaggataagagacgagaagagagaggagaggaggcgcaga
gagctggagaagaaacgccagagggaggatgaaaagaggaagaggagggaggaggagaga
cgcaaacgcaaggaggctgagaagcagaagaaactgtcggagaaggagatcaagatcaag
cttttgaagaagagtgacagggatgatgacctagactcagacagactgaaggacaaaggg
gacagcggagagacagaccgaaacaagtgggacaaacccagcggacacgcaaagtcaaag
gaacccaaggagaagggtcagcaggagggtgacaaagagcagcgggagcatagccgcaga
cagaaggaccacagaggaagagacgaggagcggaaacgccagaggcaccactatgagttc
gacaagttcatgcgccgcaaagaggagactaagtggggcaaaggttactgccacgaccgt
gctaagaaagagggccatcaccatggctactactgcaccgaggggggggacaaggggggc
aaggaggacagggaggatcagggtggcaggaaggagcgaatccggaacaaggtgagcgag
aagtctgtgatagtgcatcaggacagagggaccgcgcagtcagagggaacacaccagata
ggagggtctctgccagccaaggaccgtccggccatgcagttgtaccaacctggcgcccgt
aaccgcaaacgcatgatctcagggggcaaaggtttcgactgcccccctgtcagccatgcc
cttgagcctggccccgaaccttgctatgaggttgttaccatgggaacagggtcagagaaa
agtggagatgagtag

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