Osmerus eperlanus (European smelt): 134018341
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Entry
134018341 CDS
T10927
Symbol
usp16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134018341 (usp16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oep01002
]
134018341 (usp16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oep04121
]
134018341 (usp16)
Enzymes [BR:
oep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134018341 (usp16)
Peptidases and inhibitors [BR:
oep01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134018341 (usp16)
Ubiquitin system [BR:
oep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134018341 (usp16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
ANK_LRRK2
RbpA
Motif
Other DBs
NCBI-GeneID:
134018341
NCBI-ProteinID:
XP_062314223
LinkDB
All DBs
Position
4:complement(2818163..2871969)
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AA seq
836 aa
AA seq
DB search
MGKKRQKDKSPGEDNDVDLTGPVCCHIRKGIDRNILKRLPRDLYLNTCQDCKDEDYTTEV
QLGDREDRETPTIWMCLKCGNRGCGRNSENQHAIKHYEKPRSDPHCLVINLEIWCVWCYI
CDDEIQYSRTGNLAQLVTCVKKRVSSEPCKTLPHRKVELGDRMMKETQEIKQPDTGMEKN
QEDKENIFKQKKIVKKESGMKGQSQGVAKDSSVVSVKGLSNLGNTCFFNAVVQNLSQTRL
LRQMLNKVAKEKIGLTIPCAVSSDLDPILVQLEQPGSLTLAMCEFLNEIQFSRKEVVTPR
ELFTQVCKKAGRFKGCQQQDSHELLRYMLDGMKAEEIKRVSSGIFAALKKAGDVESSKTL
ITDYERNGFPKNSIDQVFGGEMTSTIMCQQCKTVSFVTEMFLDLSLPVSDEAYKIHRKNT
PKSSEGSQEGRDSSMRLANGIDMSTDAGSKYQQRKAKKQAKKQAKNPRRQQDFEGKLKLN
SLTDQDTAVSTQSNNADNESVEMVENGTLTDEPKSKDQPAKTDLQGQDLEYKLEEEEDSV
VDDETSSTSVVSNHNTALSEDQNTEESLLDDQLAQVKKGGEDVVPSKSFKGEDQLAKYLE
NMSLNNSEDGEVDMESAKAKQYTVVNHDPDLAFQTLALRMAPKKQDCSVQSCLFQFTEVE
HLTENNSLLCIACTRTTRQLSSKISEGSKNKVYTDALKQILISSPPPVLTLHLKRFQQVG
YSVCKVNRHVDFPQILDLAPFCSVNCKGVTEGDTQVLYSLYGIVEHSGTMRSGHYTAYVK
TQLNCSLDPHNGVADQGEAGTCRGSWFHVSDSSVKPVMESKVQSSQAYILFYERLL
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaaacgtcaaaaggacaaaagccctggggaagacaatgatgttgacctgaca
ggtccagtttgctgccacattaggaagggcatagaccgaaatatcctcaagagacttcca
agagatttgtacttgaacacctgccaggactgtaaagatgaagattacacaacagaagtt
cagttgggggacagagaggatagggaaactcccacaatatggatgtgccttaaatgtgga
aacagagggtgtggacgaaactcagagaaccagcatgctataaaacactatgagaagcct
cgctcagatccacattgtctcgtgattaatttggagatctggtgtgtttggtgttatatc
tgtgatgatgaaatccagtattctaggacagggaatttggctcaactggtgacctgtgtt
aaaaagcgagtttcatcagaaccgtgcaagacactgccacacagaaaagtagagttgggt
gacaggatgatgaaagaaacacaagagataaagcaaccagacacgggcatggagaaaaac
caagaggataaggagaacatattcaagcagaagaaaattgtgaagaaagagagtggtatg
aaagggcagagccagggagttgccaaagacagtagtgttgtatcagtcaagggactcagt
aacctaggaaacacatgtttctttaatgcagttgttcagaacctttctcagacacggctt
ttgaggcaaatgctcaacaaggtggcaaaagagaagattggtctcacaataccatgtgct
gtttcatctgatctcgaccctatcctggtgcaattagagcaaccaggatcccttacactg
gctatgtgtgaatttctcaatgagatccagttttccaggaaagaggttgtcaccccgagg
gaactgttcacacaagtttgcaaaaaggcaggaagatttaaaggatgtcagcagcaagat
agccatgaacttctgcgttatatgctggatggaatgaaagccgaggagattaaaagagta
agttcaggaatatttgcagctttaaaaaaagcgggggatgtagaatcatcaaaaaccctg
attacagactatgaaaggaacggatttcccaagaactccattgaccaggtgtttggaggg
gagatgacgagcacaataatgtgtcaacagtgtaaaacggtgtcatttgtcacagagatg
ttcctggatctttctcttccagtctcagatgaggcttacaagattcacaggaaaaatacc
ccgaagagcagtgagggaagccaggagggcagagacagttctatgcggctggccaatggg
attgacatgtccactgacgctggcagcaagtaccagcagaggaaagccaagaagcaggct
aaaaaacaagcaaagaatccgaggaggcagcaggatttcgaagggaagctcaagctaaac
agtctaactgatcaggatacagcagtgagtacacagtcaaacaatgctgacaatgagagt
gtggaaatggtagagaatgggaccctaacagatgagccaaaaagtaaagaccaaccagca
aagacagatcttcagggacaagatctagagtacaagctagaagaggaggaagactcagtg
gttgacgatgaaacttcctccacatctgtggtcagcaaccataacactgccttgtcagag
gaccaaaacacagaggaaagtttgttagatgaccaactggcccaagttaaaaaaggtgga
gaagatgttgttccatctaaaagttttaaaggggaggaccagctggccaaatacctggag
aacatgtctctcaacaattctgaagatggtgaggtggacatggagagtgctaaggctaaa
cagtacacagtggtaaaccatgacccagatctggccttccaaactctagccttaaggatg
gcaccaaaaaagcaagattgttctgtccagtcctgcctctttcagttcacagaagtggaa
cacttgactgaaaacaacagtttgctctgcattgcatgcaccaggacaaccagacaacta
agcagcaaaatctcagaaggatccaagaataaagtttacacagatgccttgaagcaaata
ctgatatcctctccaccaccagtacttactctgcacttaaagaggtttcaacaggttggc
tacagtgtatgtaaagtgaaccgccatgtcgacttccctcagattctggatttagcacct
ttttgttccgtaaactgcaagggtgtgacagagggagacacacaagtgctttacagtctc
tatggcattgtggagcacagcggaacaatgagatcaggccattacacggcttatgttaaa
acacaacttaattgctctttagacccacataatggagtggctgaccaaggggaagctggg
acgtgtagaggatcatggttccatgtcagtgacagcagtgtgaagcctgtgatggagagc
aaagtgcaaagttcccaagcctacatccttttctatgaaagattgttatag
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