Osmerus eperlanus (European smelt): 134018395
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Entry
134018395 CDS
T10927
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03040
Spliceosome
oep05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134018395
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134018395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oep03041
]
134018395
Spliceosome [BR:
oep03041
]
Common components
Common spliceosomal components
SR proteins
134018395
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
134018395
NCBI-ProteinID:
XP_062314295
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All DBs
Position
4:5466179..5470610
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AA seq
372 aa
AA seq
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MPRVYVGRLSYHVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIIEHARGPRRDRDGYAGGHGGSGRSSSGGYSTRSRTGRDKYGPPVRTEYRLIVEN
LSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSHSDMKRALDKLDGTDINGRKI
RLVEDRPRRSRRSYSGSRSRSRSCRRSRSRSSQSHSRSRSRSRSHSHKRRRSRSKSDRKA
RSKSASNKSRSRTCKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKSRSKVKSERDSCS
QSKESKSVSKKPRSRSASPVENGTDEPHAKSGSRSPSLPADKRRSKSEEKRSASRSKSRS
PSRSRSRSTSQD
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtgtatgttgggcgtctgagttatcatgttcgtgaaaaagacatccagaga
ttttttagtggatatggaaagctcatggaaatcgatttgaaaaatggatacggattcgtc
gagttcgaagacaaccgggacgctgacgacgcagtgtatgagctaaatgggaaggagttg
tgtggggaacgcgtcattatcgaacatgccagaggaccgcgacgtgaccgggatggatac
gcagggggtcacgggggaagtgggcgcagcagtagtggtggttacagcaccaggagccgt
actggcagggacaagtatgggccgccagtccgcacagagtaccggttaatcgtggaaaac
ctgtcgagtcgctgcagctggcaggacctcaaggacttcatgcgacaggccggcgaggtc
acgtacgccgacgcgcacaaggaacgcaccaatgagggcgtgatcgagtttcgctcccac
tcggacatgaagcgggccctggacaagctggacgggactgacatcaacggcaggaagatc
cgcctggtggaggaccggccccgccgcagccgccgctcctactccggcagccgctccagg
tctcgcagctgccgtcgttctcgcagtaggagctcccagagccactccagatctcgctct
aggtctcgttcccacagccacaagagacggcgttcccgctccaagtctgacaggaaggct
cgttccaagtcggcctccaataaatcacgctctcgcacgtgcaagtcccgctccaagtcc
cgctccaagtcccgctccaagtcccgctccaagtcccgctccaagtcccgctccaagtcc
cgctccaagtcccgctccaagtcccgctccaaggtgaagtctgagcgggattcctgcagc
cagtccaaggagtccaagtctgtcagtaagaagccccggagtcgctccgcctctcctgtg
gagaatgggactgacgagccccatgccaagtctggctcccgctccccctccctgcccgca
gacaagcgccgctcgaaatcggaagagaagcgctcagcctctcgctccaagtcccgctct
ccgtctcgctccaggtctagatccacctcccaggattag
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