KEGG   Osmerus eperlanus (European smelt): 134018777
Entry
134018777         CDS       T10927                                 
Symbol
kdm5bb
Name
(RefSeq) lysine-specific demethylase 5B-B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
oep  Osmerus eperlanus (European smelt)
Brite
Enzymes [BR:oep01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     134018777 (kdm5bb)
Protein phosphatases and associated proteins [BR:oep01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     134018777 (kdm5bb)
Chromosome and associated proteins [BR:oep03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    134018777 (kdm5bb)
SSDB
Other DBs
NCBI-GeneID: 134018777
NCBI-ProteinID: XP_062314993
LinkDB
Position
4:11593787..11608511
AA seq 1553 aa
MTQPRLDEFRSPPECPVFEPSWEEFGDPFAFINKIRPIAEKTGICKVRPPPDWQPPFACD
VDRLHFTPRIQRLNELEAQTRVKLNFLDQIAKFWDLQGCALKIPHVERKILDLYQLNKLV
ADEGGFDIVCRERKWTKIAMTMGFAPGKAVGSHLRSHYERILYPYNLFQSGANLLAPELA
SKLMRLVADPDLEKKPTMPVDSSDKEFKLHDLAQHQFVQPTETCPNARRAKRMRSEVDAL
EQSHTHFSEELHLKPPGCVKTEPGEPCENRPNLRRRMGSFVAKPEPEKEIPIPVKQEPQE
SKEPVSEADKNKSRYKKPAPPVSTVDLYVCLVCSSGTDEDRLLLCDGCDDSYHTFCLIPP
LSDVPKGDWRCPKCLAQECSKPQEAFGFEQAYRDYSLRAFGDMADSFKSDYFNMPVHMVP
TELVEKEFWRLVGAIEEDVTVEYGADIASKEFGSGFPIKNGRFKVAPADEKYLKCGWNLN
NMAMMDPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGA
PGFAAEQLEEVMRKLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITF
PRAYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRMLNRYCVFSHDEMVCNMASKANS
LDVVLASAVQKDMSTMIREERDLREKVRKMGVLHCQEAKYDHLQDDERQCAKCRTTCYLS
AITCPCSPGVLVCLHHIKDLCACPLSNYTLNYRFTLDDLYPMMNAVKQRAESYDDWAARV
TDTLEAKLDKKKGLAVFHSLVDESESNMFPDNDQLRQLRLVTQDAEKCASVAQQLLKGKR
QTRYRCGGGKSQSHLTVEELRSFVRQLYNLPCSLSQAPLLKELLNRIEDFQQHSEKVLAD
EVPGTEEIQGLLDISFDFDMELPELPLLRVRLEQARWLEGVQQAGSQPATLSLDTMRRLI
DQGVGLAPHPSVEKAMARLQELLTVSEHWEEKASSLLKARPPHSLETLTGAAAKVESIPA
YLPNCLLLKDSINRAREWLQEAEELQVGGCVPMLDSLSDMVLRGQAIQVHLEPLELLESL
VAEVQAWKESAAKMFLRRNSSFTLLEVLCPRCEVGHWSPKRKSKKAKDSPQHSKKRMVRL
DCLSDVERALLESKDSTSAMATLGEVRLREMEALSSLRAANESKLLPTTECMDLKVCVCQ
KPPMGAMLQCELCRDAFHSVCVRDPSNTRSAQPWLCPLCQRSEKPPLDMALSLLASLQRI
KVRLPEGDALRYMIERTVSWQDRVEKVSDPCDLPELEERPRTPPTPSDRAFPNHAADTNE
QAPYLTPEWNRTSSVQTVFYTEQRCIPLQGLSPELEELMVEGLLLQVSLPEIPSLYHMLL
NGFRSQHTGGNMLSQDDPSECDNHKQCKSQGRNQPQNENGGHDTQREVVSVAEKKAKRRL
ERAGLEAVRRDKAKKLQHKRQKVNKDKNLERRAASTSSSPRSDFSQSDNSDEEMVMCPAE
RCQLPEGDEVDWVQCDGSCNQWFHQVCVGVSAELAEKEDYVCVSCTLKDGHMK
NT seq 4662 nt   +upstreamnt  +downstreamnt
atgacccagcctcgactagatgagttcaggtctcctccggagtgcccagtcttcgaaccc
agctgggaagaattcggtgatccttttgcttttattaataagatccgtccaatagcggaa
aaaactggaatttgcaaggttcgcccacctccggactggcagcctccatttgcttgtgat
gttgacagacttcacttcactcctcgaatccagaggctcaatgaattggaggcacagact
agagtcaagcttaatttcttggaccagatcgcaaaattttgggatttgcagggatgtgcc
ctaaagattcctcacgtggagcgcaaaattttggacctgtatcaactcaataagctggtg
gcagatgaggggggatttgatattgtatgtagagagaggaaatggaccaagattgcaatg
accatgggctttgcacctggcaaggctgtgggctctcacctccgttcacactatgaaaga
atcctctacccctataacctcttccaaagtggagcaaaccttctggcgccagagctagct
tccaaactgatgcgtttagtggctgatcctgatcttgagaagaagcccaccatgcctgtg
gatagcagtgataaggagttcaagctccacgacctggctcagcatcagtttgtccagcca
actgagacctgccccaatgcccgcagagccaagcgcatgagatctgaagtggacgctctt
gaacagagccacacacacttttcagaagaactccacctaaaaccacctggctgtgtgaag
acagaaccaggggaaccctgtgagaacaggcccaacctgaggaggaggatgggctctttt
gtagctaagcctgagccagagaaagagattcctattccagtgaaacaggagccccaggag
agtaaggaaccggtgagcgaagcagacaaaaacaagtcacggtataagaaacccgcccct
ccagtgagcacagtggacctgtacgtgtgtctggtgtgcagcagtgggactgacgaggac
cgtctgttgctgtgtgatggctgtgatgacagctaccacacattttgtctcatcccccct
cttagcgacgtcccaaagggggattggaggtgccccaagtgcctggctcaggaatgcagc
aaacctcaggaggcctttggctttgagcaggcatacagggactattccttgcgtgcattt
ggggacatggcagactccttcaaatctgattacttcaacatgccagttcatatggttcct
acagagctggtggagaaagagttctggcgtttggtgggggccatcgaggaggacgtcact
gtcgagtatggagcagacatagcctccaaggagtttgggagtggattccccatcaaaaat
ggaagatttaaggttgctcctgccgatgagaagtatctcaagtgtggttggaacctgaac
aacatggcaatgatggatccttctgtgctgacccatgtcacggctgacatctgtgggatg
accctgccctggctctacgtgggcatgtgcttctcttccttctgctggcacatcgaggac
cactggagctactccatcaactacctgcactggggggagcccaaaacatggtatggtgct
cctggatttgctgcggagcaactggaggaggtgatgaggaaactggcccctgagctgttt
gactcccagcctgacctgctgcaccagctggtcaccattatgaaccctaacaccctcatg
gcccacggagtcccaatttacagaaccaatcagtgtgctggtgagtttgtcatcactttt
cccagagcctaccacagtggcttcaaccagggcttcaactttgccgaggctgtcaacttt
tgcactgtggactggatgcccctgggtaggcagtgtgtggaccactatcgcatgctcaac
cgatactgtgtcttctcccatgacgagatggtctgcaacatggcctccaaggccaacagt
ctggatgtagtcctggcttctgcagtacagaaggacatgtccactatgatcagagaagag
cgagacctgcgagagaaagtccgaaagatgggagtgttgcattgccaggaggcgaaatac
gatcacctccaagacgatgaacggcagtgtgccaagtgtcggaccacctgttacctgtct
gccatcacctgcccctgcagccctggggtgctggtgtgtctccaccacatcaaggacctc
tgtgcctgccctctcagcaactacacactgaattacagatttacactggatgacctctac
cccatgatgaacgctgtgaagcagcgagctgagtcatacgacgactgggccgctcgtgtg
accgacactctggaggcgaaactagacaagaaaaaaggcctggctgtattccactccctc
gttgacgaatctgagtccaacatgttccctgacaacgaccagctccgccagctccgtctg
gttactcaggatgcagagaagtgtgcctcggtggcacagcagctcctcaaggggaaaagg
cagaccaggtaccggtgtggtggggggaagtcccagagtcatctgactgtggaggagctg
aggtcattcgttaggcagctgtacaacctcccctgcagtctcagccaagcccccctgttg
aaggagctgctgaatcgcattgaggacttccagcagcacagtgagaaggtcctggccgac
gaggttccaggaacagaggagatccagggcctgctggacatcagctttgactttgacatg
gaactgcctgagctgcctcttctgcgggtgaggctggagcaggcgcgctggctggagggg
gtccagcaggctggctcccagcctgccaccctgtccctggacacgatgaggaggctcatc
gaccagggcgtgggcttggccccccacccctctgtggagaaggccatggctcgcctgcag
gagctgctcactgtgtctgaacactgggaggagaaggcgagcagtcttctcaaggccagg
cccccccactcactagagaccctgacgggggctgctgccaaggtggagtccatccctgct
tacctccccaactgtctactgctgaaggactccatcaacagagccagagagtggcttcag
gaagctgaagaacttcaggttggaggctgtgtccccatgttggacagcttgtctgacatg
gtgctgcgagggcaggccatccaggtccacctggagcccctggagctgctggagtccctg
gtggcagaggtgcaggcctggaaggagagcgcagccaaaatgttcctgaggagaaattca
tcctttaccttgctcgaggtcctgtgtccgagatgtgaggttggacactggtctcccaaa
aggaagtccaagaaagcgaaagatagccctcagcacagcaagaagaggatggtgcggctg
gactgcctgagtgatgtggaaagggccctcttggagagcaaagactctacctctgctatg
gcaactcttggggaggtgcggttaagggagatggaggctctctcctccctcagggcagct
aacgaatcgaagctcctccccaccactgagtgtatggacctgaaggtgtgtgtgtgtcag
aagccccccatgggggccatgttacagtgcgagctctgcagggacgccttccacagtgtg
tgtgtgagggacccctccaacacccgctcagcccagccctggctgtgccctctctgccag
cgctcagagaagcccccactagacatggcgctgtccctgctggcctccctgcaacgtata
aaggtacgcctgccagagggcgacgcgctgcgctacatgattgaaaggacagtcagctgg
caagacagagtggaaaaagtctcagatccctgtgacctaccagagctggaggagagaccc
aggactccgcccaccccttccgacagggcgttccccaatcacgccgctgacacaaacgaa
caggctccatatctgactccagagtggaacaggacaagcagcgttcagacagtcttctac
acagagcagcggtgcatccccttgcagggtttgagtccggagctggaggagttgatggtt
gaaggtctgctgctgcaggtgtccctaccagaaatccctagcctttaccacatgttactg
aacggcttcaggagtcaacacaccggcggcaacatgttgtcacaggatgacccctcagaa
tgtgacaatcacaagcagtgtaaatctcagggaaggaatcagccacaaaatgagaatgga
ggtcacgacacgcagagggaggtggtgagcgttgcagagaagaaggccaagcgacgcttg
gagagggcgggtctggaagcggtacgcagggacaaggccaaaaagctccaacacaagcgc
cagaaggtgaacaaagacaagaacctggagcgccgagcagcttccacctcctcttctcct
cgctcagacttctctcagtccgacaactctgatgaagagatggtcatgtgtccggcagaa
agatgccagctgccagagggagatgaggtggattgggtccagtgtgatggcagctgtaac
cagtggttccaccaggtctgtgttggcgtgtcggccgagctggcagagaaggaggactac
gtttgtgtcagttgtacattaaaggatggacacatgaagtga

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