Osmerus eperlanus (European smelt): 134018820
Help
Entry
134018820 CDS
T10927
Symbol
brpf1
Name
(RefSeq) peregrin
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
oep Osmerus eperlanus (European smelt)
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134018820 (brpf1)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
134018820 (brpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
134018820
NCBI-ProteinID:
XP_062315074
LinkDB
All DBs
Position
4:12101866..12109728
Genome browser
AA seq
1310 aa
AA seq
DB search
MGLDFDVKTFCHNLRATKPPYECPVETCRKVYKSYSGIEYHLYHYDHDNPTPAQGMPQKR
RKGRPPRVSLIGSGDGEGGVGKGCGSGMGGHGGITPGSPNRSERSHSPGRETMTYAQAQR
MVELEIHGRIHRISIFENIDVVSEDDSGTEDPPSSGGGGGGACNGGDSGAGGSETGGNGK
DRPDTPAANGGKGATPKSGKHKSKEKKKESHHHSASSGPAVKLPEVVFRELDQDRPDAPP
RPSSYYRYIDKSVEELDEEVEYDIDEEDYIWLDIMNDKRRSDGVTPIPQEVFEYLMDRLE
KESYFESHNKADPSALIDEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIPEG
QWLCRRCLQSPSRAVDCALCPNKGGAFKQTDDARWAHVVCALWIPEVCFANTVFLEPIDS
IEHIPAARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGANG
TSFSVRKTAYCDIHTPPGSARPLGGVGGASMGSSHSEGELDDDDEPSIGHDDDSKGWSSE
RAKRAKAKSRLKMKRARKILAEKRNAAPVVSVPCIPPHRLSKITNNLTVPRKSQFMQRLH
SYWTLKRQSRNGVPLLRRLQTHLQSQRNADQLQPQPPQSQLPMVTCVWELQPDSEEKQSA
LKEQLKAWQRLRHDLERARLLVELIRKREKLKRETIKVQQMALEMQLTPFLVLLRSTLEQ
LQERDTSNFFTEPVPLAEVPDYLDHIERPMDFQTMWNCLEEHRYLTFEAFEADFGLIVNN
CLKYNAKDTVFYRAALRLREMGGAVIRTARRQAERIGIEYESGMHLPREPSPDSQHERER
ERERERDREREQERERERERDRPLSSNEEDLLLPENRRRLPLEEQLHYLQASFDEVSSGK
HSIGRSRRAKALRKEMTVIKRKLAHQREGGVGPGGRSSGGGGDRGPSLSHHPSSTGHHDE
GGESSSQEISSKDLSVSSSALASEVGRRTSVLFSKKNPKTAGPPKRPGRPPKNRDASHGG
TGVSPSPVGPPQLPLLSPPRQRKRPRSPHSSSSSESDSENDDTILGLPRNGFDGGNQPVT
ESFRVYRNERSLPRSSSDSESTTSSSSSAASDRTSTTPSKQGRGKPSFSRSAFQEDSSEE
TSGTENDSYSVGGSRSVSHLVRGRARSGCWMTSDDYSTLDALDLVWAKCRGYPSYPALII
DPKMPREGVFHRGVPIPVPPLDVLKLGEQMTQEAREHLFLVLFFDNKRTWQWLPRSKLVP
LGVDQELDKEKMLEGRKSNIRKSVQVAYHRAMQHRNKVQGDPSSDTSDSD
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggggctggactttgacgtgaagactttctgtcacaatctgcgagccaccaaaccccct
tatgagtgcccagtggaaacatgccggaaggtgtacaagagttacagtggtattgagtac
cacctgtaccactatgaccatgacaatcccactcctgcacagggcatgccccagaagagg
aggaagggccggccccctcgtgtgtcgctgattgggtcaggagatggggagggtggagtg
gggaagggatgtggctcagggatgggtggtcatggagggatcacccctggtagtccgaac
aggtcagagcggtctcactccccaggcagggagaccatgacctacgcccaggcccagcgc
atggtggagctggagatccatggacgcatccaccgcatcagcatatttgagaacattgat
gtggtgtcggaggatgacagtggaacggaggaccctccatcctctggtgggggtggggga
ggggcgtgtaatgggggagacagtggggcaggagggagcgagactggggggaacggaaag
gacagaccagacacccctgctgctaatggaggcaagggagccactcctaagtctggtaag
cacaagagtaaagagaagaagaaagagtcccaccatcacagcgcttcttctgggccagca
gtcaagctacctgaggtggtgttcagagagctggaccaggacagacccgacgccccccca
cggccctcctcatactacagatacatagataagtcagtggaggagctggatgaagaggtg
gagtatgacatagatgaggaggactacatctggctggacatcatgaacgacaagcgtcgc
agtgacggtgtgacccccatccctcaggaggtctttgagtacctcatggaccggctcgag
aaggagtcctatttcgagagtcataacaaggccgaccccagcgctttgatagacgaggat
gccgtctgctgcatctgcaacgacggagagtgccagaacagcaacgtgatcctcttctgt
gacatgtgtaacctggccgtgcaccaggagtgctatggcgtgccctacatcccagagggc
cagtggctgtgccggcgttgcctccagtcacccagccgggcagtggactgcgccctctgc
cccaacaaaggaggggccttcaaacagacggacgacgcccgctgggcacatgtggtgtgt
gccctctggatcccagaggtgtgcttcgccaacacggtcttcctggagcccatcgacagc
atcgagcacatccccgccgcccgatggaagctcacctgttacatctgcaagcagaggggc
tccggcgcctgcatccagtgtcacaaggccaactgctacaccgccttccacgtcacctgc
gcccagcaagccggcctgtacatgaagatggagccggtcagagagaccggggccaacggg
acctccttcagcgtccgcaagacggcctactgcgacatccacacccctccgggctcggct
cgcccccttgggggggtgggaggggccagcatgggctcctcccacagcgagggggagctg
gacgatgatgatgaacccagcatcggccatgacgatgactccaagggctggagctctgag
cgggccaagagggccaaggccaagtcaaggctaaagatgaagagagctagaaagatcctg
gctgagaagaggaatgctgcgcctgtcgtgtctgtgccctgtatccccccccacaggctc
agtaagatcaccaataacctgacggtccccaggaagagccagttcatgcagcgcctgcac
agctactggaccctgaagaggcagagccgaaatggcgtgcccctgctgcgccggctccag
acccacctgcagtcgcagcgcaacgccgaccagctccagccccagccgccgcagtcccag
ctgcccatggtaacctgtgtgtgggagcttcagccggacagtgaggagaagcagtcggcc
ttgaaggagcagctgaaggcgtggcagaggctgagacatgacctggagagagccagactg
ctggtggagctcattcgcaagagggagaagctgaagagggagacgatcaaggtgcagcag
atggcgctagagatgcagctgactcccttcctggtactgctcaggagcactctggagcag
ctgcaggagagagacaccagcaacttcttcactgagcctgtgcccctggctgaggttcct
gactacctggaccatatcgagaggccaatggacttccagaccatgtggaactgccttgag
gaacaccgctacctcacctttgaggccttcgaggcagactttggcctcatagtcaacaac
tgcctcaagtacaatgctaaggacactgtattctatcgtgccgcgctgcgcctgagggag
atgggcggagccgtgattcggactgcccgccgtcaggcagagcgaatagggattgaatat
gagtcaggcatgcacctcccccgagagcccagcccggacagtcagcatgaacgagaacgg
gagcgagagagggagcgagacagagagagggaacaggaaagagaaagggagcgggagcga
gacaggccgctctcctctaatgaggaagacctgctcctgcctgagaaccgccgccggctg
ccgctggaggagcagctgcattacctgcaggcgagctttgatgaggtcagctcgggaaag
cacagcatcggccggtctcgaagggccaaagccctaaggaaggagatgaccgtcatcaag
aggaaactggcccaccagcgtgagggaggagttggcccgggggggcggagctctgggggt
ggcggggaccgcggtccatccctctcccaccacccctcctccacgggtcaccatgacgag
gggggcgagagcagcagccaggagatcagtagcaaagacctgagtgtgtcctcctctgcc
ctggcctcggaggtgggccgccgcacctctgtcctcttctccaagaagaaccccaaaact
gccggaccccccaagaggccgggccgcccccctaagaaccgggacgcaagccacggtggg
acgggggtgagccccagccccgtgggccctcctcagctgcctctgctgtccccccccagg
cagaggaagaggccccgcagcccccacagcagctccagctctgagagcgacagtgagaac
gacgacaccattctgggcctgccaaggaacggtttcgatggagggaaccagccggtgacg
gagagtttccgtgtgtacagaaacgagaggagtctgcctcgctccagctctgactcagag
tctaccaccagcagcagcagcagcgcagcctctgacaggaccagtaccactccatccaaa
caaggcagaggaaagccttcgttctcgcgctcggccttccaggaggacagtagtgaggag
acgtcaggcacggagaatgactcttactctgttggaggatcacggagtgtctcacactta
gtgcgtggccgggccaggtcaggctgctggatgacctcagatgactactccaccctggac
gctctggacctggtgtgggccaagtgcagaggctacccctcctacccagctctgatcatc
gatccaaagatgccccgggagggggtgttccaccggggagtccccatccctgtgcccccc
cttgacgtattaaagttgggggagcagatgacccaggaggccagggaacacctctttctc
gtgcttttcttcgacaacaagaggacctggcagtggctgccccgctccaagctggttcct
ctgggggtggaccaggaactggacaaggagaagatgctggagggaagaaagtccaacatt
cgcaagtctgtgcaggtggcctaccaccgcgcgatgcagcaccgcaacaaggtgcaagga
gatcccagcagcgacaccagtgacagcgactga
DBGET
integrated database retrieval system
