Osmerus eperlanus (European smelt): 134018826
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Entry
134018826 CDS
T10927
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134018826 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oep03036
]
134018826 (mbd4)
03400 DNA repair and recombination proteins [BR:
oep03400
]
134018826 (mbd4)
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
134018826 (mbd4)
DNA repair and recombination proteins [BR:
oep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
134018826 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
134018826
NCBI-ProteinID:
XP_062315080
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All DBs
Position
4:complement(12135017..12138457)
Genome browser
AA seq
485 aa
AA seq
DB search
MNSQTPSPIGFMEESCQASRMPPGWVRVVKQRKTGKTAGKMDVYITSPQGQRFRSRASLQ
AFLLQDEGRDLHVEHFDFSTKGGGAETPLSLACQEGQKRETRQKERQEKLPNSRKQAALS
TSCRQRTRHRDQITILTQQSSDTAPFVRDNHRDATRSCTDTGIPPPDINKDIPQRNTHDL
SSKDKDGSDSAEKGSSAAEDVILESPQRKGLLREKILRLPRPADPLDPSIGQQEKRTVSQ
LPAPVVTIQSATESEGEDEGLVEGEKVRKPDAKGEAMGDLETEVPEQVELLSSPETTGGS
PTPVIDSSRKSKLSVDKRKTSPYFSRKALKEGLSPPRRKALKKWIPPRSPFNLVQETLFH
HPWKLLVATIFLNKTSGKMAIPVLWQFFKQYPSAEVTRGADWKPLAELLRPLGLYELRAK
TIIRFSDEYLIKKWRYPIELHGIGKYGNDSYRIFCVEEWRQVTPQDHKLNKYHTWLQENS
ESLGI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcagaccccaagccccattggattcatggaggagtcatgccaagcttctagg
atgccaccaggctgggtgagagtggtgaaacagcggaaaactggaaagacagctggtaaa
atggacgtctatataacaagtccccagggacagaggtttcggtcaagggcatctcttcaa
gcctttctcctccaagatgaaggaagagatttacacgtggaacactttgacttctccacc
aagggtggcggtgcagaaacccctctttccttggcctgtcaggagggacagaagagggaa
accagacagaaggagagacaggagaagctgccgaacagcagaaaacaagccgccttatcc
acatcctgtaggcagaggaccagacacagagaccaaatcaccattcttacccagcagtct
tctgacacagctcccttcgtcagggacaatcacagagatgcgacaaggagttgcacagac
actggtatcccgccacctgacatcaacaaagacatccctcagagaaacactcatgactta
tctagcaaggataaggatggcagtgattcagctgaaaagggctcatcagcagctgaggat
gtcatcctggagagtcctcaaaggaaagggctgctgagggagaagatactgagactgccc
cggcctgctgacccactagatccttctattggccaacaggagaaacgtacagtttctcag
cttcctgctccagtagtgacgattcagtcagccactgagagtgagggggaagatgagggc
ttggttgagggggagaaggttaggaagcctgatgctaagggtgaggctatgggcgacttg
gaaacagaggtgccggaacaggtggagctgttgtcatctcctgagaccactggagggagc
cctacaccagtgatagattccagtagaaaatcaaagttgtcggtagacaaacggaagact
agtccttacttcagcaggaaggcactaaaagagggtctgagtccccccaggagaaaagca
ttgaagaagtggatcccccctcgctccccctttaacttggtacaagaaaccctatttcat
catccttggaaacttctggtggccaccatcttccttaacaagaccagcggtaaaatggcc
atcccagtgctgtggcagttctttaaacagtacccatcagcagaggtgacccggggagct
gactggaagcccctggctgagctgctcaggcctctgggcttgtatgagctccgagccaaa
accatcatcaggttctctgatgagtacctgattaagaagtggcgttaccccatagagctc
catggcattggaaagtatggcaatgactcctacagaatattttgcgtggaggaatggaga
caggtgactccccaggatcacaagttgaacaagtatcacacttggctgcaggagaactct
gaaagtctaggcatttaa
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