Osmerus eperlanus (European smelt): 134018887
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Entry
134018887 CDS
T10927
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134018887
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oep02000
]
134018887
Transporters [BR:
oep02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134018887
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134018887
NCBI-ProteinID:
XP_062315202
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Position
4:complement(13007803..13017268)
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AA seq
713 aa
AA seq
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MATNGTKTDAQVTELNEVATNDKPKSLDVKEEKKKDLPERETWGGRFDFLLSCVGYAIGL
GNVWRFPYLCGKNGGGAFLIPYFLTLIFAGIPLFLLECSLGQYTSIGGLGVWKLAPMFKG
VGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTDLPWSSCNNPWNTEKCYSNYSIAYNTN
LTSAVLEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWVLVYFCIWKGVSWTGKVVYFSA
TYPYFMLFILFIRGVTLPGAKEGILFYITPDFQKLKESEVWLDAATQIFFSYGLGLGSLI
ALGSYNTFNNNVYRDSIIVCCINSFTSMFAGFVIFSIVGFMANVTNRPIADVAASGPGLA
FLAYPEAVTQLPVSPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPQALRGRRELFI
AAVCFVSYLIGLSNITQGGIYVFKLFDYYSASGMCLLFLVFFECISISWCYGVNKFYDNI
QEMIGYKPCIWFKMCWVVFTPLIVGGVFLFSAFQMVPLTMGDYVFPGWGQGVGWLMALSS
MLLIPGYMIYMFIGLKGTYKERLRIMLQPPAVVRRPQENGPEQQVETNAVNLASPANPAA
PAIPVVPATPAAPAAAAAPAAPAAPTAPAAPAAAASPTNPTSPAAPANPAPPANPATAAS
PVNPTSPTNPTQTTSPTNPISLTYPPNPVSPTEPIIPLNPVSPPNLTNAEANV
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaacggcaccaagacggatgcacaagtgacagaactgaacgaagtggcaact
aatgacaaacccaagtcattggatgtgaaagaagaaaagaagaaggatcttcccgaaaga
gaaacatggggggggagatttgatttccttctgtcgtgtgtaggttatgcaattggacta
ggcaacgtatggagatttccatatctctgtggaaaaaacggtggaggagccttcttgatt
ccttattttttgaccctgatattcgctgggatccccttgtttctgctggaatgctccctt
ggccagtacacgtctattggcgggcttggtgtgtggaaactggctcccatgttcaaaggt
gttggccttgcagcagctgttctgtccttctggcttaacatttactacattgtcataatt
tcctgggctatttactacctgtacaattcgtttaccactgatcttccatggagttcatgt
aacaatccatggaacacagaaaaatgttactcaaactacagcattgcatataacaccaat
ctcaccagtgctgtactggagttctgggagcgcaacatgcatcagatgaccgatggcttg
gataaaccaggacagatacggtggccattggctataacactggcaatcgcttgggtgctt
gtgtacttctgtatctggaaaggggttagctggacgggaaaggtggtgtacttctcagcc
acatacccttatttcatgctgttcattctgttcatccgtggagttactctgcctggagcg
aaagagggaattctcttctatatcacacctgactttcagaaactcaaagagtctgaggta
tggctagatgcagccacccaaatatttttctcttatggattgggactggggtccttgata
gctctgggcagctataacacgttcaataacaatgtttacagagactccatcattgtgtgc
tgcatcaactccttcaccagcatgtttgctggctttgtcatcttctctattgttggcttc
atggcgaacgtgacaaacaggcccattgctgatgttgcagcttcaggtcccggcttggct
ttccttgcgtacccagaggctgtgacccagctacccgtctctcctctctgggccatcctg
ttcttctctatgctgctgatgctggggattgacagccagttctgcacagtggagggcttc
atcactgctctggtggatgagtttcctcaagctcttagagggagacgagagctcttcatc
gcagctgtctgttttgtctcctacctcatcggcctttctaacatcacacagggtgggatc
tacgtgttcaagctgtttgactactactctgccagtggaatgtgtctgctcttcctggtc
ttcttcgagtgcatttccatatcctggtgctatggtgtgaacaagttctatgacaacatc
caggagatgattggctacaaaccctgtatatggtttaagatgtgctgggtcgtgttcacc
cctctcatcgtcggtggggtgttcctgttcagtgccttccaaatggtccccctcaccatg
ggcgactacgtgtttcccggctggggccagggagtaggctggctcatggctctctcctcc
atgttgctcatcccgggatacatgatttacatgttcattggcctcaagggcacctacaaa
gagcgcctgcggataatgctacagcccccagcagtggtgcgacgtccccaggagaatgga
cctgagcaacaggtggagaccaacgcagttaatttagctagccctgctaacccagctgct
cctgccatcccagttgttcctgccaccccagccgccccagctgccgcagccgccccagct
gccccagccgccccaactgccccagctgccccagctgctgcagcaagccccaccaatcca
accagccctgctgccccagccaacccagctcctcctgccaacccagccactgcagccagt
cctgtgaacccaaccagcccaacaaacccaacccagaccacaagcccaaccaacccgata
agcctcacctatccgccaaacccagttagcccaacagagcctatcatccccctcaaccct
gtgagcccccctaacctgacaaatgcagaggccaatgtctag
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