Osmerus eperlanus (European smelt): 134018903
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Entry
134018903 CDS
T10927
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
oep Osmerus eperlanus (European smelt)
Pathway
oep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134018903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oep03021
]
134018903
03036 Chromosome and associated proteins [BR:
oep03036
]
134018903
Transcription machinery [BR:
oep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
134018903
Coactivators
SAGA/TFTC/STAGA complex
134018903
Chromosome and associated proteins [BR:
oep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
134018903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
134018903
NCBI-ProteinID:
XP_062315238
LinkDB
All DBs
Position
4:13182147..13190667
Genome browser
AA seq
971 aa
AA seq
DB search
MRLTSERNRAKMAAGSDLLDDVFFNTEVDEKVVSDLVGSLESELTGSGHGDSTVRVQSSA
NHIGNSAVGGNSNVQGSKMGLSQELAKAGTGGVQGGVINSTRSQGSTMDAAAGTTSAAGS
GMAGGQSKLVGGIVTVAGSGKPETTGVQTLNGSSVMINSHNSESSTNSSSNNTSPATTIV
NNGPGSGVKGNVILSSTSGTVIQTPLINTHKAVTSTVISQPSSTLNSVPTVTLVRPPMQT
PGANTQQSGSNTVLTSAVSVANPACSGPQTNKFETPKTIIQTTAQIAASSATAAVKSPPT
LQNVIRTSTPTTIAANPGGIRAIAPQVLAPRLAQPQQNAPNIQNIQLPPGMVLVRSETGQ
LLMIHQQTLAQMQAQSQSQSAMAPRPATPTSTPSVQINSVQAPGSLLTRQVSPTSIIKQG
SPVQASVQATTTLQRPPVLQNTIMLGGSASTPGQPLVTPSPGQAGSAAVRTPAPPLAVST
ETVENVKKCKNFLSTLIKLASSEKQSSETTANVKELVKNLLEGKIEAEDFTSRLYKELNS
SPQPYLVPFLKRSLPALRQLTPDSSAFIQQSQLPLPSAQPAPAPAAASTALTAVVLGGTA
AQRPPLSSSSSVGAKQSPVISLAHTPLSKPSLMVPQQQGALVRPQVTLSQSPMVTLRGQT
HSRVIMGQPQMVKHLQAVPVMKQPLAPGGRPAAGPSSLLTAAQRNKLKEAGGSFRDDDDI
NDVASMAGVNLSEESARILATNSELVGTVTRSCKDEAFLATSSLTRRVLEIGKKFGVAEL
GPEVINYISHATQQRLQNLLEKVSEVAQQKNITFKEDDKHEQASDVRAQLKFFEQLDQME
KQRKEEQEREILMKAAKSRSRQEDPEQLRLKQKAKEMQQQELAQIRQREANMTALAAIGP
RKKRKMDSPISGATAEGTSSGPSREGGSGGGGSRQFTRQRITRVNLRDLLFCLENERETS
HSHLLYRGFLK
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcacgagcgaacgtaacagggcaaagatggcggcgggttccgatttgctggat
gatgttttcttcaacacagaggtggacgagaaagtagttagtgatctagttggatctttg
gagtctgagctcacgggatcgggtcacggagactccacggtcagggtccagtcttcagca
aatcacattggcaactcagcagtaggtggcaattccaatgtccagggcagcaaaatggga
ctttcacaagagcttgctaaagcagggactggtggagtgcaaggcggtgtcattaatagt
acgaggtcccaaggttcaaccatggatgcagcagccgggaccacatcggcagcgggatcg
ggaatggcaggcggtcaaagcaagttggtcggtgggattgtaacggtggcaggcagcgga
aaacctgaaacaactggtgtgcaaactttgaatggaagtagcgtaatgataaactctcac
aattcggaaagctcaactaatagcagtagcaacaacacttcaccagctaccactattgtc
aacaacggacctggctctggagtcaaaggaaacgtaattctttcatcaacctctggcact
gtcattcaaactcctttaattaatacacataaggctgtcacatcgactgtaatatctcag
ccttcctccactttgaacagtgtgcctaccgtcacactcgtgaggccgcctatgcaaacc
cccggagcaaatactcagcagagcgggagcaacacagttctgacatcagctgtcagcgtt
gccaatcctgcatgttcaggacctcagactaacaaattcgaaacaccaaaaacgattatt
caaacaacagcacagatcgcggcgtctagtgctacagctgcagtgaaaagcccaccgact
ttacaaaacgtaataaggacttccaccccaacaacaattgctgcgaatcctggcggaata
cgagcaattgctccgcaagtgttggctccacggcttgcccagcctcaacagaatgctcca
aacatccaaaacattcagcttccgccagggatggtcctggtgagaagtgagactgggcag
ctgttgatgatccaccagcagaccctggcccagatgcaggctcagtcccagtcccaaagc
gccatggcaccacggccagccacgcccaccagcactccctctgtccagatcaactctgtt
caggctccagggtccctgttgacccgtcaggtgtcccccaccagcatcatcaagcagggt
tccccagtgcaggctagtgtgcaggccaccaccacgctccagaggcctccggtactgcag
aacaccatcatgctgggagggtccgccagcaccccaggccagcctctggtcaccccctcc
ccaggacaggctggctctgctgcggtgaggacccccgctcctcccttggccgtcagcacg
gagactgtggagaatgtgaagaagtgtaagaacttcctatccacgctgatcaagttggcg
tccagtgaaaagcagtcctctgagaccacagccaacgtcaaggagctggttaagaacctt
ctggaggggaagattgaagcagaggacttcactagtaggttgtacaaggagctcaactct
tctcctcagccctaccttgtgcctttcctcaagaggagtctccctgctctgcgtcagctg
accccagattcgtcagccttcatccagcagagtcagctgcccctgcccagcgcccagcct
gcccccgccccagccgctgcctccaccgccctgactgccgtggtcttggggggcacagcc
gcccagagaccccccctctcctccagtagcagtgtgggggccaaacagtcccctgtgatc
agcctggcccacacacccctcagcaagcccagcctgatggtgccccagcagcagggggcg
ctggtgagaccccaggtgaccctgtcccagtcccccatggtgaccctccgaggacagacc
cacagtcgcgtcatcatgggccagccgcaaatggtcaagcatctgcaggcagtgcctgtg
atgaagcagcctctggccccagggggccgaccagcagcagggccctcgtctctattgacg
gcagctcagaggaacaagctgaaggaggcggggggaagcttcagggacgatgatgacatc
aatgatgttgcctccatggctggagtcaacctgtcggaagagagcgcccgtatcctggca
acaaactctgagcttgttggcacggtgacccgttcctgtaaggatgaggccttcctcgct
acctcttcactgacccgcagagtcctggaaataggtaagaagtttggagtcgctgaactg
ggccctgaggtcataaactacatatcccatgctactcagcagcgactccagaacctgctg
gagaaagtgtctgaggtggcacagcagaaaaacatcacattcaaggaggatgataagcac
gagcaggcgagtgatgtccgggctcagctcaagttctttgagcagctggaccagatggag
aagcagaggaaggaggagcaggagagggagatcctcatgaaggctgcgaagtctcggtcg
cggcaagaggaccctgagcagctccggctaaaacagaaggccaaagagatgcagcagcag
gagctggcccagatcagacagagagaggccaacatgactgccctggcagccatcggaccc
cgtaagaaaaggaagatggactctcccatcagcggggccacagctgagggcacgagctct
ggcccctctcgggagggggggtcgggaggggggggctccagacagttcacccgccagcgc
atcaccagggtcaacctcagggacctgcttttctgcctggagaacgagagagaaaccagc
cactcccatctcctctacagaggcttcctcaaatag
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